EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000011246 (Gene tree)
Gene ID: 100221046
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 24547 bases
Position: chr5:25445342-25469888
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000011598	RRM_1	PF00076.22	6.6e-09	1	1
ENSTGUP00000011598	PWI	PF01480.17	3.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000011724	-	2508	-	ENSTGUP00000011598	835 (aa)	-	H0ZLX5

Gene Model

Click here to download ENSTGUG00000011246's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000011246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000011246	-	51	79.176	ENSAPOG00000017757	rbm25a	54	77.751	Acanthochromis_polyacanthus
ENSTGUG00000011246	-	50	80.047	ENSAOCG00000013695	rbm25a	52	79.277	Amphiprion_ocellaris
ENSTGUG00000011246	-	84	80.047	ENSAPEG00000007514	rbm25a	53	78.795	Amphiprion_percula
ENSTGUG00000011246	-	95	95.369	ENSAPLG00000006643	RBM25	100	95.369	Anas_platyrhynchos
ENSTGUG00000011246	-	51	90.805	ENSCAPG00000005239	RBM25	57	91.860	Cavia_aperea
ENSTGUG00000011246	-	63	92.899	ENSCHOG00000008903	RBM25	62	92.899	Choloepus_hoffmanni
ENSTGUG00000011246	-	53	92.360	ENSCGRG00001020817	Rbm25	54	95.711	Cricetulus_griseus_chok1gshd
ENSTGUG00000011246	-	72	42.921	ENSEBUG00000002963	rbm25b	53	65.116	Eptatretus_burgeri
ENSTGUG00000011246	-	82	95.088	ENSEEUG00000007350	RBM25	81	95.088	Erinaceus_europaeus
ENSTGUG00000011246	-	52	70.186	ENSELUG00000007730	rbm25b	55	70.485	Esox_lucius
ENSTGUG00000011246	-	100	99.402	ENSFALG00000005445	RBM25	99	99.402	Ficedula_albicollis
ENSTGUG00000011246	-	100	65.493	ENSFHEG00000005318	rbm25a	50	70.913	Fundulus_heteroclitus
ENSTGUG00000011246	-	96	64.908	ENSGMOG00000014097	rbm25b	89	68.924	Gadus_morhua
ENSTGUG00000011246	-	77	75.000	ENSGMOG00000014070	rbm25a	85	73.397	Gadus_morhua
ENSTGUG00000011246	-	54	93.172	ENSGALG00000047486	-	99	93.172	Gallus_gallus
ENSTGUG00000011246	-	54	68.824	ENSGAFG00000001092	rbm25b	50	72.464	Gambusia_affinis
ENSTGUG00000011246	-	51	79.677	ENSHBUG00000016908	rbm25a	51	79.277	Haplochromis_burtoni
ENSTGUG00000011246	-	83	96.140	ENSHGLG00100018236	-	98	95.312	Heterocephalus_glaber_male
ENSTGUG00000011246	-	53	72.098	ENSHCOG00000000142	rbm25b	52	74.265	Hippocampus_comes
ENSTGUG00000011246	-	100	66.154	ENSIPUG00000021051	rbm25b	52	78.554	Ictalurus_punctatus
ENSTGUG00000011246	-	95	69.373	ENSKMAG00000016242	rbm25a	54	77.349	Kryptolebias_marmoratus
ENSTGUG00000011246	-	50	74.884	ENSKMAG00000018826	rbm25b	54	73.303	Kryptolebias_marmoratus
ENSTGUG00000011246	-	52	84.545	ENSLOCG00000014196	rbm25b	51	84.541	Lepisosteus_oculatus
ENSTGUG00000011246	-	80	77.228	ENSMAMG00000000165	rbm25a	51	78.535	Mastacembelus_armatus
ENSTGUG00000011246	-	51	79.677	ENSMZEG00005011183	rbm25a	54	78.795	Maylandia_zebra
ENSTGUG00000011246	-	57	66.860	ENSMALG00000020441	rbm25b	84	74.324	Monopterus_albus
ENSTGUG00000011246	-	70	96.752	MGP_CAROLIEiJ_G0017921	Rbm25	99	96.752	Mus_caroli
ENSTGUG00000011246	-	70	96.752	ENSMUSG00000010608	Rbm25	99	96.752	Mus_musculus
ENSTGUG00000011246	-	70	96.752	MGP_PahariEiJ_G0029677	Rbm25	99	96.752	Mus_pahari
ENSTGUG00000011246	-	70	96.752	MGP_SPRETEiJ_G0018766	-	99	96.752	Mus_spretus
ENSTGUG00000011246	-	100	96.292	ENSPSIG00000006058	RBM25	99	96.778	Pelodiscus_sinensis
ENSTGUG00000011246	-	86	79.625	ENSPREG00000009228	rbm25a	53	78.606	Poecilia_reticulata
ENSTGUG00000011246	-	77	96.250	ENSPCAG00000006226	RBM25	77	96.250	Procavia_capensis
ENSTGUG00000011246	-	51	79.677	ENSPNYG00000022596	rbm25a	52	78.795	Pundamilia_nyererei
ENSTGUG00000011246	-	50	72.767	ENSSLDG00000024573	rbm25b	96	73.982	Seriola_lalandi_dorsalis
ENSTGUG00000011246	-	61	96.282	ENSSSCG00000039876	RBM25	99	96.282	Sus_scrofa
ENSTGUG00000011246	-	85	77.241	ENSTRUG00000017964	rbm25b	52	78.261	Takifugu_rubripes
ENSTGUG00000011246	-	92	66.160	ENSTNIG00000012222	rbm25b	66	78.365	Tetraodon_nigroviridis
ENSTGUG00000011246	-	61	96.296	ENSTBEG00000010538	-	54	96.032	Tupaia_belangeri
ENSTGUG00000011246	-	77	93.086	ENSVPAG00000009052	RBM25	76	93.827	Vicugna_pacos
ENSTGUG00000011246	-	95	72.932	ENSXETG00000021857	rbm25	53	87.407	Xenopus_tropicalis
ENSTGUG00000011246	-	100	71.260	ENSXCOG00000004043	RBM25	53	78.947	Xiphophorus_couchianus
ENSTGUG00000011246	-	54	68.776	ENSXCOG00000002222	rbm25b	52	72.837	Xiphophorus_couchianus
ENSTGUG00000011246	-	54	68.958	ENSXMAG00000017290	rbm25b	52	72.554	Xiphophorus_maculatus
ENSTGUG00000011246	-	100	69.882	ENSXMAG00000009077	RBM25	51	74.880	Xiphophorus_maculatus