EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000011418 (Gene tree)
Gene ID: -
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 10668 bases
Position: chr3:57595572-57606239
Accession: 100225677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000011772	CAF1	PF04857.20	3.5e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000011901	PNLDC1-201	1587	XM_012572593	ENSTGUP00000011772	485 (aa)	XP_012428047	H0ZME9

Gene Model

Click here to download ENSTGUG00000011418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000011418's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000011418	PNLDC1	68	30.362	ENSTGUG00000004971	PARN	55	30.362

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000011418	PNLDC1	68	30.556	ENSG00000140694	PARN	58	30.029	Homo_sapiens
ENSTGUG00000011418	PNLDC1	99	58.557	ENSG00000146453	PNLDC1	93	58.557	Homo_sapiens
ENSTGUG00000011418	PNLDC1	69	30.833	ENSAMEG00000011208	PARN	55	30.833	Ailuropoda_melanoleuca
ENSTGUG00000011418	PNLDC1	99	58.763	ENSAMEG00000015371	PNLDC1	91	58.763	Ailuropoda_melanoleuca
ENSTGUG00000011418	PNLDC1	68	30.278	ENSAPLG00000013914	PARN	55	30.833	Anas_platyrhynchos
ENSTGUG00000011418	PNLDC1	99	78.645	ENSAPLG00000007014	PNLDC1	93	78.645	Anas_platyrhynchos
ENSTGUG00000011418	PNLDC1	68	30.278	ENSACAG00000004973	PARN	54	30.278	Anolis_carolinensis
ENSTGUG00000011418	PNLDC1	100	59.588	ENSACAG00000013667	PNLDC1	92	59.588	Anolis_carolinensis
ENSTGUG00000011418	PNLDC1	99	57.938	ENSANAG00000034713	PNLDC1	91	58.209	Aotus_nancymaae
ENSTGUG00000011418	PNLDC1	68	30.833	ENSANAG00000031516	PARN	55	30.833	Aotus_nancymaae
ENSTGUG00000011418	PNLDC1	99	58.111	ENSBTAG00000015166	PNLDC1	92	58.111	Bos_taurus
ENSTGUG00000011418	PNLDC1	68	30.362	ENSBTAG00000018097	PARN	58	30.702	Bos_taurus
ENSTGUG00000011418	PNLDC1	99	57.938	ENSCJAG00000011865	PNLDC1	95	57.938	Callithrix_jacchus
ENSTGUG00000011418	PNLDC1	68	31.198	ENSCJAG00000015866	PARN	56	30.663	Callithrix_jacchus
ENSTGUG00000011418	PNLDC1	68	30.278	ENSCAFG00000018795	PARN	55	30.278	Canis_familiaris
ENSTGUG00000011418	PNLDC1	99	59.794	ENSCAFG00000000740	PNLDC1	91	59.794	Canis_familiaris
ENSTGUG00000011418	PNLDC1	68	30.278	ENSCAFG00020024126	PARN	55	30.278	Canis_lupus_dingo
ENSTGUG00000011418	PNLDC1	99	57.377	ENSCAFG00020017742	PNLDC1	91	57.377	Canis_lupus_dingo
ENSTGUG00000011418	PNLDC1	99	57.172	ENSCHIG00000003141	PNLDC1	92	56.289	Capra_hircus
ENSTGUG00000011418	PNLDC1	68	31.198	ENSCHIG00000018143	PARN	55	31.198	Capra_hircus
ENSTGUG00000011418	PNLDC1	99	56.907	ENSTSYG00000005606	PNLDC1	91	56.907	Carlito_syrichta
ENSTGUG00000011418	PNLDC1	95	46.767	ENSCAPG00000011893	PNLDC1	89	46.767	Cavia_aperea
ENSTGUG00000011418	PNLDC1	68	31.198	ENSCPOG00000002263	PARN	55	31.198	Cavia_porcellus
ENSTGUG00000011418	PNLDC1	99	56.584	ENSCPOG00000019565	PNLDC1	91	56.584	Cavia_porcellus
ENSTGUG00000011418	PNLDC1	99	58.144	ENSCCAG00000026232	PNLDC1	91	58.144	Cebus_capucinus
ENSTGUG00000011418	PNLDC1	68	30.833	ENSCCAG00000030367	PARN	55	30.833	Cebus_capucinus
ENSTGUG00000011418	PNLDC1	99	57.526	ENSCATG00000033196	PNLDC1	91	57.526	Cercocebus_atys
ENSTGUG00000011418	PNLDC1	99	59.588	ENSCLAG00000003228	PNLDC1	91	59.588	Chinchilla_lanigera
ENSTGUG00000011418	PNLDC1	68	31.389	ENSCLAG00000015406	PARN	55	31.389	Chinchilla_lanigera
ENSTGUG00000011418	PNLDC1	68	30.641	ENSCSAG00000008142	PARN	55	30.641	Chlorocebus_sabaeus
ENSTGUG00000011418	PNLDC1	99	56.674	ENSCSAG00000012478	PNLDC1	93	56.674	Chlorocebus_sabaeus
ENSTGUG00000011418	PNLDC1	96	69.032	ENSCPBG00000004050	PNLDC1	91	69.032	Chrysemys_picta_bellii
ENSTGUG00000011418	PNLDC1	65	30.994	ENSCPBG00000006609	PARN	58	30.994	Chrysemys_picta_bellii
ENSTGUG00000011418	PNLDC1	99	57.320	ENSCANG00000043076	PNLDC1	93	57.320	Colobus_angolensis_palliatus
ENSTGUG00000011418	PNLDC1	99	47.325	ENSCGRG00001011981	-	89	47.325	Cricetulus_griseus_chok1gshd
ENSTGUG00000011418	PNLDC1	69	30.791	ENSCGRG00001012096	Parn	55	31.638	Cricetulus_griseus_chok1gshd
ENSTGUG00000011418	PNLDC1	99	58.557	ENSCGRG00001007470	-	91	58.557	Cricetulus_griseus_chok1gshd
ENSTGUG00000011418	PNLDC1	99	48.765	ENSCGRG00000003103	-	89	48.765	Cricetulus_griseus_crigri
ENSTGUG00000011418	PNLDC1	99	58.557	ENSCGRG00000010221	-	91	58.557	Cricetulus_griseus_crigri
ENSTGUG00000011418	PNLDC1	69	30.791	ENSCGRG00000004939	Parn	55	31.638	Cricetulus_griseus_crigri
ENSTGUG00000011418	PNLDC1	68	30.028	ENSCVAG00000014848	parn	51	30.447	Cyprinodon_variegatus
ENSTGUG00000011418	PNLDC1	68	30.362	ENSDNOG00000000833	PARN	62	30.362	Dasypus_novemcinctus
ENSTGUG00000011418	PNLDC1	99	58.282	ENSDNOG00000013709	PNLDC1	92	58.282	Dasypus_novemcinctus
ENSTGUG00000011418	PNLDC1	99	55.350	ENSDORG00000011517	Pnldc1	91	55.350	Dipodomys_ordii
ENSTGUG00000011418	PNLDC1	96	52.778	ENSETEG00000007587	PNLDC1	94	52.778	Echinops_telfairi
ENSTGUG00000011418	PNLDC1	99	32.311	ENSEBUG00000008118	PNLDC1	90	32.311	Eptatretus_burgeri
ENSTGUG00000011418	PNLDC1	99	55.488	ENSEASG00005019029	PNLDC1	91	55.488	Equus_asinus_asinus
ENSTGUG00000011418	PNLDC1	68	30.556	ENSEASG00005011400	PARN	55	30.556	Equus_asinus_asinus
ENSTGUG00000011418	PNLDC1	99	60.619	ENSECAG00000012898	PNLDC1	91	60.619	Equus_caballus
ENSTGUG00000011418	PNLDC1	68	30.556	ENSECAG00000017792	PARN	55	30.556	Equus_caballus
ENSTGUG00000011418	PNLDC1	73	62.500	ENSEEUG00000005717	-	85	62.500	Erinaceus_europaeus
ENSTGUG00000011418	PNLDC1	99	60.000	ENSFCAG00000002848	PNLDC1	91	60.000	Felis_catus
ENSTGUG00000011418	PNLDC1	68	31.476	ENSFCAG00000044961	PARN	55	31.476	Felis_catus
ENSTGUG00000011418	PNLDC1	100	92.813	ENSFALG00000012081	PNLDC1	97	92.813	Ficedula_albicollis
ENSTGUG00000011418	PNLDC1	68	32.033	ENSFDAG00000009234	PARN	56	32.033	Fukomys_damarensis
ENSTGUG00000011418	PNLDC1	99	58.932	ENSFDAG00000021334	PNLDC1	91	58.932	Fukomys_damarensis
ENSTGUG00000011418	PNLDC1	68	30.726	ENSGALG00000003091	PARN	55	30.726	Gallus_gallus
ENSTGUG00000011418	PNLDC1	77	77.273	ENSGALG00000011624	PNLDC1	73	77.273	Gallus_gallus
ENSTGUG00000011418	PNLDC1	99	68.944	ENSGAGG00000015276	PNLDC1	97	68.817	Gopherus_agassizii
ENSTGUG00000011418	PNLDC1	99	58.351	ENSGGOG00000014077	PNLDC1	93	58.351	Gorilla_gorilla
ENSTGUG00000011418	PNLDC1	68	30.556	ENSGGOG00000025224	PARN	57	30.556	Gorilla_gorilla
ENSTGUG00000011418	PNLDC1	68	31.944	ENSHGLG00000010886	PARN	55	31.944	Heterocephalus_glaber_female
ENSTGUG00000011418	PNLDC1	99	59.381	ENSHGLG00000006889	PNLDC1	91	59.381	Heterocephalus_glaber_female
ENSTGUG00000011418	PNLDC1	68	31.944	ENSHGLG00100014659	PARN	55	31.944	Heterocephalus_glaber_male
ENSTGUG00000011418	PNLDC1	99	59.381	ENSHGLG00100018275	PNLDC1	91	59.381	Heterocephalus_glaber_male
ENSTGUG00000011418	PNLDC1	68	30.362	ENSSTOG00000007519	PARN	55	30.362	Ictidomys_tridecemlineatus
ENSTGUG00000011418	PNLDC1	100	59.918	ENSSTOG00000005595	PNLDC1	92	59.918	Ictidomys_tridecemlineatus
ENSTGUG00000011418	PNLDC1	99	54.733	ENSJJAG00000009937	Pnldc1	91	54.733	Jaculus_jaculus
ENSTGUG00000011418	PNLDC1	68	30.084	ENSKMAG00000009462	parn	52	30.084	Kryptolebias_marmoratus
ENSTGUG00000011418	PNLDC1	68	30.919	ENSLAFG00000015036	PARN	56	30.919	Loxodonta_africana
ENSTGUG00000011418	PNLDC1	56	59.124	ENSLAFG00000030189	PNLDC1	80	59.124	Loxodonta_africana
ENSTGUG00000011418	PNLDC1	99	57.732	ENSMFAG00000041296	PNLDC1	91	57.732	Macaca_fascicularis
ENSTGUG00000011418	PNLDC1	65	30.117	ENSMFAG00000044852	PARN	58	30.117	Macaca_fascicularis
ENSTGUG00000011418	PNLDC1	99	57.732	ENSMMUG00000004181	PNLDC1	93	56.998	Macaca_mulatta
ENSTGUG00000011418	PNLDC1	68	30.641	ENSMMUG00000018849	PARN	55	30.641	Macaca_mulatta
ENSTGUG00000011418	PNLDC1	99	57.732	ENSMNEG00000034271	PNLDC1	91	57.732	Macaca_nemestrina
ENSTGUG00000011418	PNLDC1	68	30.641	ENSMNEG00000045108	PARN	55	30.641	Macaca_nemestrina
ENSTGUG00000011418	PNLDC1	99	55.052	ENSMLEG00000044059	PNLDC1	91	55.052	Mandrillus_leucophaeus
ENSTGUG00000011418	PNLDC1	100	75.103	ENSMGAG00000012470	PNLDC1	93	75.103	Meleagris_gallopavo
ENSTGUG00000011418	PNLDC1	68	30.362	ENSMGAG00000001004	PARN	55	30.362	Meleagris_gallopavo
ENSTGUG00000011418	PNLDC1	99	48.125	ENSMAUG00000012298	Pnldc1	90	48.125	Mesocricetus_auratus
ENSTGUG00000011418	PNLDC1	99	58.351	ENSMICG00000008021	PNLDC1	91	58.351	Microcebus_murinus
ENSTGUG00000011418	PNLDC1	69	30.791	ENSMOCG00000022211	Parn	71	31.638	Microtus_ochrogaster
ENSTGUG00000011418	PNLDC1	99	59.343	ENSMOCG00000014287	Pnldc1	91	59.343	Microtus_ochrogaster
ENSTGUG00000011418	PNLDC1	68	30.663	ENSMODG00000004915	PARN	71	30.663	Monodelphis_domestica
ENSTGUG00000011418	PNLDC1	100	62.168	ENSMODG00000007420	PNLDC1	91	62.168	Monodelphis_domestica
ENSTGUG00000011418	PNLDC1	69	30.508	MGP_CAROLIEiJ_G0020466	Parn	55	31.356	Mus_caroli
ENSTGUG00000011418	PNLDC1	99	58.557	MGP_CAROLIEiJ_G0021045	Pnldc1	91	58.557	Mus_caroli
ENSTGUG00000011418	PNLDC1	69	30.791	ENSMUSG00000022685	Parn	66	36.957	Mus_musculus
ENSTGUG00000011418	PNLDC1	99	58.763	ENSMUSG00000073460	Pnldc1	91	58.763	Mus_musculus
ENSTGUG00000011418	PNLDC1	69	31.073	MGP_PahariEiJ_G0016172	Parn	55	31.921	Mus_pahari
ENSTGUG00000011418	PNLDC1	99	58.776	MGP_PahariEiJ_G0023361	Pnldc1	92	58.776	Mus_pahari
ENSTGUG00000011418	PNLDC1	99	58.763	MGP_SPRETEiJ_G0021975	Pnldc1	91	58.763	Mus_spretus
ENSTGUG00000011418	PNLDC1	69	30.791	MGP_SPRETEiJ_G0021361	Parn	55	31.638	Mus_spretus
ENSTGUG00000011418	PNLDC1	99	58.969	ENSMPUG00000004920	PNLDC1	91	58.969	Mustela_putorius_furo
ENSTGUG00000011418	PNLDC1	68	30.278	ENSMPUG00000014464	PARN	55	30.278	Mustela_putorius_furo
ENSTGUG00000011418	PNLDC1	99	60.619	ENSMLUG00000000747	PNLDC1	91	60.619	Myotis_lucifugus
ENSTGUG00000011418	PNLDC1	69	30.471	ENSMLUG00000005414	PARN	71	30.471	Myotis_lucifugus
ENSTGUG00000011418	PNLDC1	99	59.794	ENSNGAG00000017714	Pnldc1	91	59.794	Nannospalax_galili
ENSTGUG00000011418	PNLDC1	68	30.556	ENSNLEG00000010241	PARN	55	30.556	Nomascus_leucogenys
ENSTGUG00000011418	PNLDC1	99	58.557	ENSNLEG00000011282	PNLDC1	93	58.557	Nomascus_leucogenys
ENSTGUG00000011418	PNLDC1	59	53.448	ENSMEUG00000014042	-	100	53.448	Notamacropus_eugenii
ENSTGUG00000011418	PNLDC1	65	51.104	ENSMEUG00000011926	-	63	51.104	Notamacropus_eugenii
ENSTGUG00000011418	PNLDC1	78	56.614	ENSOPRG00000003813	PNLDC1	71	56.614	Ochotona_princeps
ENSTGUG00000011418	PNLDC1	99	59.016	ENSODEG00000008047	PNLDC1	92	59.016	Octodon_degus
ENSTGUG00000011418	PNLDC1	99	51.553	ENSOANG00000012199	PNLDC1	91	51.860	Ornithorhynchus_anatinus
ENSTGUG00000011418	PNLDC1	68	31.285	ENSOCUG00000000322	PARN	55	31.285	Oryctolagus_cuniculus
ENSTGUG00000011418	PNLDC1	99	58.557	ENSOCUG00000013867	PNLDC1	91	58.557	Oryctolagus_cuniculus
ENSTGUG00000011418	PNLDC1	99	58.969	ENSOGAG00000007331	PNLDC1	91	58.969	Otolemur_garnettii
ENSTGUG00000011418	PNLDC1	99	56.879	ENSOARG00000004585	PNLDC1	91	56.879	Ovis_aries
ENSTGUG00000011418	PNLDC1	69	31.111	ENSOARG00000007574	PARN	71	31.111	Ovis_aries
ENSTGUG00000011418	PNLDC1	68	30.556	ENSPPAG00000031438	PARN	55	30.556	Pan_paniscus
ENSTGUG00000011418	PNLDC1	99	57.938	ENSPPAG00000026651	PNLDC1	92	57.851	Pan_paniscus
ENSTGUG00000011418	PNLDC1	68	31.476	ENSPPRG00000018583	PARN	55	31.476	Panthera_pardus
ENSTGUG00000011418	PNLDC1	99	60.000	ENSPPRG00000012854	PNLDC1	91	60.000	Panthera_pardus
ENSTGUG00000011418	PNLDC1	68	31.476	ENSPTIG00000012135	PARN	55	31.476	Panthera_tigris_altaica
ENSTGUG00000011418	PNLDC1	99	57.938	ENSPTIG00000011501	PNLDC1	91	57.938	Panthera_tigris_altaica
ENSTGUG00000011418	PNLDC1	99	57.938	ENSPTRG00000018762	PNLDC1	93	57.938	Pan_troglodytes
ENSTGUG00000011418	PNLDC1	68	30.556	ENSPTRG00000007792	PARN	55	30.556	Pan_troglodytes
ENSTGUG00000011418	PNLDC1	99	57.732	ENSPANG00000022009	PNLDC1	91	57.732	Papio_anubis
ENSTGUG00000011418	PNLDC1	68	30.641	ENSPSIG00000014804	PARN	58	31.287	Pelodiscus_sinensis
ENSTGUG00000011418	PNLDC1	69	31.445	ENSPEMG00000018439	Parn	55	31.445	Peromyscus_maniculatus_bairdii
ENSTGUG00000011418	PNLDC1	99	59.588	ENSPEMG00000016301	Pnldc1	91	59.588	Peromyscus_maniculatus_bairdii
ENSTGUG00000011418	PNLDC1	66	32.000	ENSPMAG00000003956	parn	67	32.500	Petromyzon_marinus
ENSTGUG00000011418	PNLDC1	89	63.279	ENSPCIG00000023412	PNLDC1	98	63.279	Phascolarctos_cinereus
ENSTGUG00000011418	PNLDC1	68	30.663	ENSPPYG00000007123	PARN	55	30.663	Pongo_abelii
ENSTGUG00000011418	PNLDC1	99	54.898	ENSPPYG00000017148	PNLDC1	91	54.898	Pongo_abelii
ENSTGUG00000011418	PNLDC1	99	52.990	ENSPCAG00000014169	PNLDC1	91	52.990	Procavia_capensis
ENSTGUG00000011418	PNLDC1	99	58.351	ENSPCOG00000025722	PNLDC1	91	58.351	Propithecus_coquereli
ENSTGUG00000011418	PNLDC1	68	30.726	ENSPVAG00000002547	PARN	56	30.726	Pteropus_vampyrus
ENSTGUG00000011418	PNLDC1	69	61.877	ENSPVAG00000005325	PNLDC1	64	61.877	Pteropus_vampyrus
ENSTGUG00000011418	PNLDC1	68	30.084	ENSPNAG00000018905	parn	58	30.362	Pygocentrus_nattereri
ENSTGUG00000011418	PNLDC1	99	59.381	ENSRNOG00000023140	Pnldc1	100	54.321	Rattus_norvegicus
ENSTGUG00000011418	PNLDC1	69	31.356	ENSRNOG00000002912	Parn	82	42.169	Rattus_norvegicus
ENSTGUG00000011418	PNLDC1	99	57.732	ENSRBIG00000033806	PNLDC1	91	57.732	Rhinopithecus_bieti
ENSTGUG00000011418	PNLDC1	99	57.732	ENSRROG00000043919	PNLDC1	93	57.732	Rhinopithecus_roxellana
ENSTGUG00000011418	PNLDC1	68	30.919	ENSSBOG00000034726	PARN	54	30.919	Saimiri_boliviensis_boliviensis
ENSTGUG00000011418	PNLDC1	99	58.144	ENSSBOG00000019135	PNLDC1	91	58.144	Saimiri_boliviensis_boliviensis
ENSTGUG00000011418	PNLDC1	100	62.168	ENSSHAG00000015192	PNLDC1	93	62.168	Sarcophilus_harrisii
ENSTGUG00000011418	PNLDC1	68	30.641	ENSSHAG00000008493	PARN	79	30.641	Sarcophilus_harrisii
ENSTGUG00000011418	PNLDC1	65	30.117	ENSSARG00000014339	PARN	58	30.117	Sorex_araneus
ENSTGUG00000011418	PNLDC1	55	65.169	ENSSPUG00000004627	PNLDC1	99	62.054	Sphenodon_punctatus
ENSTGUG00000011418	PNLDC1	68	30.084	ENSSPUG00000007719	PARN	55	30.919	Sphenodon_punctatus
ENSTGUG00000011418	PNLDC1	99	58.197	ENSSSCG00000004046	PNLDC1	95	58.197	Sus_scrofa
ENSTGUG00000011418	PNLDC1	99	50.722	ENSTBEG00000009131	PNLDC1	93	50.722	Tupaia_belangeri
ENSTGUG00000011418	PNLDC1	70	57.018	ENSTTRG00000010409	PNLDC1	64	57.018	Tursiops_truncatus
ENSTGUG00000011418	PNLDC1	68	30.168	ENSTTRG00000002843	PARN	55	30.168	Tursiops_truncatus
ENSTGUG00000011418	PNLDC1	99	49.091	ENSUAMG00000015783	PNLDC1	91	49.091	Ursus_americanus
ENSTGUG00000011418	PNLDC1	99	54.379	ENSUMAG00000011903	PNLDC1	96	54.379	Ursus_maritimus
ENSTGUG00000011418	PNLDC1	68	30.919	ENSUMAG00000004527	PARN	55	30.919	Ursus_maritimus
ENSTGUG00000011418	PNLDC1	99	59.588	ENSVVUG00000006586	PNLDC1	98	59.588	Vulpes_vulpes
ENSTGUG00000011418	PNLDC1	68	30.278	ENSVVUG00000019509	PARN	55	30.278	Vulpes_vulpes
ENSTGUG00000011418	PNLDC1	68	31.373	ENSXETG00000010994	parn	67	31.373	Xenopus_tropicalis
ENSTGUG00000011418	PNLDC1	68	30.084	ENSXMAG00000014783	parn	51	30.084	Xiphophorus_maculatus