EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000011492 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 19941 bases
Position: chr5:27631430-27651370
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000011842	RRM_1	PF00076.22	4.3e-34	1	2
ENSTGUP00000011842	RRM_1	PF00076.22	4.3e-34	2	2
ENSTGUP00000011842	RRM_3	PF08777.11	2.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000011971	-	902	-	ENSTGUP00000011842	258 (aa)	-	H0ZML9

Gene Model

Click here to download ENSTGUG00000011492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000011492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000011492	-	65	38.690	ENSTGUG00000008416	-	79	40.940
ENSTGUG00000011492	-	68	67.797	ENSTGUG00000011425	SRSF5	67	70.787
ENSTGUG00000011492	-	67	62.222	ENSTGUG00000003455	SRSF6	52	63.388

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000011492	-	68	76.087	ENSAPOG00000017395	srsf5a	62	77.717	Acanthochromis_polyacanthus
ENSTGUG00000011492	-	68	72.727	ENSACIG00000011892	srsf5a	96	72.388	Amphilophus_citrinellus
ENSTGUG00000011492	-	68	74.863	ENSAOCG00000014967	srsf5a	62	78.689	Amphiprion_ocellaris
ENSTGUG00000011492	-	68	74.863	ENSAPEG00000009297	srsf5a	62	78.689	Amphiprion_percula
ENSTGUG00000011492	-	84	62.249	ENSATEG00000000198	srsf5a	65	78.075	Anabas_testudineus
ENSTGUG00000011492	-	96	86.400	ENSAPLG00000002469	-	93	87.308	Anas_platyrhynchos
ENSTGUG00000011492	-	68	85.393	ENSACAG00000029015	-	68	85.955	Anolis_carolinensis
ENSTGUG00000011492	-	68	71.204	ENSACLG00000027166	srsf5a	65	73.822	Astatotilapia_calliptera
ENSTGUG00000011492	-	68	79.459	ENSAMXG00000030476	srsf5a	67	80.000	Astyanax_mexicanus
ENSTGUG00000011492	-	68	88.827	ENSCPBG00000021518	-	93	76.245	Chrysemys_picta_bellii
ENSTGUG00000011492	-	68	53.571	ENSCSAVG00000011376	-	78	55.102	Ciona_savignyi
ENSTGUG00000011492	-	68	70.984	ENSCSEG00000008109	srsf5a	62	73.711	Cynoglossus_semilaevis
ENSTGUG00000011492	-	67	68.617	ENSCVAG00000016982	srsf5a	96	66.917	Cyprinodon_variegatus
ENSTGUG00000011492	-	70	78.723	ENSDARG00000029818	srsf5a	100	75.188	Danio_rerio
ENSTGUG00000011492	-	68	75.648	ENSELUG00000020439	srsf5a	62	76.684	Esox_lucius
ENSTGUG00000011492	-	100	99.612	ENSFALG00000005098	-	93	99.612	Ficedula_albicollis
ENSTGUG00000011492	-	84	57.519	ENSFHEG00000003955	srsf5a	95	62.676	Fundulus_heteroclitus
ENSTGUG00000011492	-	68	77.401	ENSGMOG00000000869	srsf5a	94	77.401	Gadus_morhua
ENSTGUG00000011492	-	100	95.769	ENSGALG00000033259	SRSF5A	93	95.769	Gallus_gallus
ENSTGUG00000011492	-	68	77.528	ENSGACG00000011761	srsf5a	70	78.090	Gasterosteus_aculeatus
ENSTGUG00000011492	-	68	88.827	ENSGAGG00000007312	-	93	76.245	Gopherus_agassizii
ENSTGUG00000011492	-	68	71.579	ENSHBUG00000014048	srsf5a	64	74.211	Haplochromis_burtoni
ENSTGUG00000011492	-	68	75.806	ENSHCOG00000017557	srsf5a	62	76.882	Hippocampus_comes
ENSTGUG00000011492	-	68	77.368	ENSIPUG00000003439	srsf5a	69	76.316	Ictalurus_punctatus
ENSTGUG00000011492	-	68	70.745	ENSKMAG00000014937	srsf5a	58	71.204	Kryptolebias_marmoratus
ENSTGUG00000011492	-	68	71.282	ENSLBEG00000017153	srsf5a	83	67.532	Labrus_bergylta
ENSTGUG00000011492	-	68	80.556	ENSLACG00000017874	-	70	81.111	Latimeria_chalumnae
ENSTGUG00000011492	-	68	81.081	ENSLOCG00000014075	srsf5a	61	81.622	Lepisosteus_oculatus
ENSTGUG00000011492	-	68	79.121	ENSMAMG00000000192	srsf5a	65	79.558	Mastacembelus_armatus
ENSTGUG00000011492	-	68	71.579	ENSMZEG00005010485	srsf5a	64	74.211	Maylandia_zebra
ENSTGUG00000011492	-	72	96.791	ENSMGAG00000011888	-	96	97.484	Meleagris_gallopavo
ENSTGUG00000011492	-	68	79.444	ENSMMOG00000009793	srsf5a	61	80.556	Mola_mola
ENSTGUG00000011492	-	68	77.273	ENSMALG00000021194	srsf5a	63	77.273	Monopterus_albus
ENSTGUG00000011492	-	68	71.958	ENSNBRG00000000771	srsf5a	64	74.603	Neolamprologus_brichardi
ENSTGUG00000011492	-	68	71.958	ENSONIG00000019583	srsf5a	64	74.603	Oreochromis_niloticus
ENSTGUG00000011492	-	69	76.087	ENSORLG00000009268	srsf5a	61	77.348	Oryzias_latipes
ENSTGUG00000011492	-	69	76.087	ENSORLG00020003281	srsf5	61	77.348	Oryzias_latipes_hni
ENSTGUG00000011492	-	69	76.087	ENSORLG00015023075	srsf5	61	77.348	Oryzias_latipes_hsok
ENSTGUG00000011492	-	68	77.222	ENSOMEG00000000628	srsf5a	66	78.333	Oryzias_melastigma
ENSTGUG00000011492	-	68	78.495	ENSPKIG00000002054	srsf5a	68	78.495	Paramormyrops_kingsleyae
ENSTGUG00000011492	-	68	89.266	ENSPSIG00000008238	-	69	89.266	Pelodiscus_sinensis
ENSTGUG00000011492	-	69	73.118	ENSPMGG00000020125	srsf5a	55	74.457	Periophthalmus_magnuspinnatus
ENSTGUG00000011492	-	68	70.157	ENSPFOG00000022993	srsf5a	72	72.052	Poecilia_formosa
ENSTGUG00000011492	-	68	70.000	ENSPLAG00000005508	srsf5a	71	71.930	Poecilia_latipinna
ENSTGUG00000011492	-	68	70.157	ENSPMEG00000016339	srsf5a	72	72.052	Poecilia_mexicana
ENSTGUG00000011492	-	68	71.579	ENSPNYG00000021245	srsf5a	64	74.211	Pundamilia_nyererei
ENSTGUG00000011492	-	68	79.348	ENSPNAG00000021333	srsf5a	66	79.891	Pygocentrus_nattereri
ENSTGUG00000011492	-	68	79.032	ENSSFOG00015008377	srsf5	66	78.495	Scleropages_formosus
ENSTGUG00000011492	-	68	70.500	ENSSMAG00000010899	srsf5a	80	54.093	Scophthalmus_maximus
ENSTGUG00000011492	-	68	75.824	ENSSDUG00000006103	srsf5a	63	79.670	Seriola_dumerili
ENSTGUG00000011492	-	68	75.824	ENSSLDG00000004146	srsf5a	63	79.670	Seriola_lalandi_dorsalis
ENSTGUG00000011492	-	68	83.708	ENSSPUG00000002052	-	68	84.270	Sphenodon_punctatus
ENSTGUG00000011492	-	68	75.410	ENSSPAG00000002821	srsf5a	63	79.235	Stegastes_partitus
ENSTGUG00000011492	-	68	72.396	ENSTRUG00000022908	srsf5a	65	75.000	Takifugu_rubripes
ENSTGUG00000011492	-	94	68.582	ENSXETG00000017937	srsf5a	72	79.787	Xenopus_tropicalis