EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000011750 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 49025 bases
Position: chr7:33151033-33200057
Accession: 9757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000012127	R3H	PF01424.22	7.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000012261	R3HDM1-201	3222	-	ENSTGUP00000012127	1073 (aa)	-	H0ZNF1

Gene Model

Click here to download ENSTGUG00000011750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000011750's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000011750	R3HDM1	69	48.526	ENSTGUG00000001697	ARPP21	89	51.823
ENSTGUG00000011750	R3HDM1	74	48.662	ENSTGUG00000015881	R3HDM2	99	47.917

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000011750	R3HDM1	100	73.622	ENSG00000048991	R3HDM1	99	79.461	Homo_sapiens
ENSTGUG00000011750	R3HDM1	89	47.637	ENSAPOG00000020850	r3hdm1	93	48.602	Acanthochromis_polyacanthus
ENSTGUG00000011750	R3HDM1	100	74.324	ENSAMEG00000014886	R3HDM1	100	74.234	Ailuropoda_melanoleuca
ENSTGUG00000011750	R3HDM1	89	47.359	ENSAOCG00000005192	r3hdm1	96	47.610	Amphiprion_ocellaris
ENSTGUG00000011750	R3HDM1	89	45.821	ENSAPEG00000016108	r3hdm1	96	46.707	Amphiprion_percula
ENSTGUG00000011750	R3HDM1	89	45.393	ENSATEG00000000232	r3hdm1	96	46.169	Anabas_testudineus
ENSTGUG00000011750	R3HDM1	100	86.276	ENSAPLG00000015231	R3HDM1	100	86.185	Anas_platyrhynchos
ENSTGUG00000011750	R3HDM1	100	75.132	ENSACAG00000001676	R3HDM1	100	75.835	Anolis_carolinensis
ENSTGUG00000011750	R3HDM1	100	73.466	ENSANAG00000035334	R3HDM1	100	75.616	Aotus_nancymaae
ENSTGUG00000011750	R3HDM1	80	48.617	ENSACLG00000027282	r3hdm1	91	49.444	Astatotilapia_calliptera
ENSTGUG00000011750	R3HDM1	64	38.728	ENSAMXG00000020587	arpp21	88	38.248	Astyanax_mexicanus
ENSTGUG00000011750	R3HDM1	92	70.264	ENSAMXG00000012861	R3HDM1	100	66.447	Astyanax_mexicanus
ENSTGUG00000011750	R3HDM1	100	54.802	ENSAMXG00000003536	r3hdm1	100	61.772	Astyanax_mexicanus
ENSTGUG00000011750	R3HDM1	100	71.265	ENSBTAG00000013302	R3HDM1	100	71.466	Bos_taurus
ENSTGUG00000011750	R3HDM1	100	73.327	ENSCJAG00000011718	R3HDM1	100	75.369	Callithrix_jacchus
ENSTGUG00000011750	R3HDM1	100	74.144	ENSCAFG00000005075	R3HDM1	100	74.054	Canis_familiaris
ENSTGUG00000011750	R3HDM1	100	74.054	ENSCAFG00020016119	R3HDM1	99	79.228	Canis_lupus_dingo
ENSTGUG00000011750	R3HDM1	100	74.071	ENSCHIG00000020851	R3HDM1	100	74.071	Capra_hircus
ENSTGUG00000011750	R3HDM1	100	70.192	ENSCPOG00000012784	R3HDM1	95	80.574	Cavia_porcellus
ENSTGUG00000011750	R3HDM1	100	72.900	ENSCCAG00000027199	R3HDM1	100	74.631	Cebus_capucinus
ENSTGUG00000011750	R3HDM1	99	81.783	ENSCATG00000023642	R3HDM1	100	73.532	Cercocebus_atys
ENSTGUG00000011750	R3HDM1	100	69.398	ENSCLAG00000007962	R3HDM1	100	76.744	Chinchilla_lanigera
ENSTGUG00000011750	R3HDM1	100	71.203	ENSCSAG00000016356	R3HDM1	100	71.429	Chlorocebus_sabaeus
ENSTGUG00000011750	R3HDM1	87	61.224	ENSCHOG00000013638	R3HDM1	91	61.088	Choloepus_hoffmanni
ENSTGUG00000011750	R3HDM1	80	92.647	ENSCPBG00000009645	R3HDM1	100	92.620	Chrysemys_picta_bellii
ENSTGUG00000011750	R3HDM1	100	73.195	ENSCANG00000034748	R3HDM1	100	75.616	Colobus_angolensis_palliatus
ENSTGUG00000011750	R3HDM1	99	70.676	ENSCGRG00001012357	R3hdm1	97	70.526	Cricetulus_griseus_chok1gshd
ENSTGUG00000011750	R3HDM1	99	72.267	ENSCGRG00000012080	R3hdm1	100	78.738	Cricetulus_griseus_crigri
ENSTGUG00000011750	R3HDM1	89	42.910	ENSCSEG00000008944	r3hdm1	96	44.046	Cynoglossus_semilaevis
ENSTGUG00000011750	R3HDM1	89	46.984	ENSCVAG00000007582	r3hdm1	96	48.286	Cyprinodon_variegatus
ENSTGUG00000011750	R3HDM1	65	35.359	ENSDARG00000061081	arpp21	90	36.351	Danio_rerio
ENSTGUG00000011750	R3HDM1	100	70.837	ENSDNOG00000000771	R3HDM1	100	70.747	Dasypus_novemcinctus
ENSTGUG00000011750	R3HDM1	100	64.919	ENSETEG00000013606	R3HDM1	100	65.611	Echinops_telfairi
ENSTGUG00000011750	R3HDM1	60	42.174	ENSEBUG00000014746	arpp21	97	44.025	Eptatretus_burgeri
ENSTGUG00000011750	R3HDM1	100	74.027	ENSEASG00005007392	R3HDM1	100	73.937	Equus_asinus_asinus
ENSTGUG00000011750	R3HDM1	100	73.893	ENSECAG00000019114	R3HDM1	100	73.803	Equus_caballus
ENSTGUG00000011750	R3HDM1	85	72.832	ENSEEUG00000012589	R3HDM1	85	71.875	Erinaceus_europaeus
ENSTGUG00000011750	R3HDM1	93	55.258	ENSELUG00000004909	R3HDM1	99	55.376	Esox_lucius
ENSTGUG00000011750	R3HDM1	93	50.781	ENSELUG00000014413	r3hdm1	100	51.934	Esox_lucius
ENSTGUG00000011750	R3HDM1	100	74.141	ENSFCAG00000027113	R3HDM1	100	74.051	Felis_catus
ENSTGUG00000011750	R3HDM1	93	91.268	ENSFALG00000013731	R3HDM1	88	91.404	Ficedula_albicollis
ENSTGUG00000011750	R3HDM1	100	69.668	ENSFDAG00000016478	R3HDM1	99	79.044	Fukomys_damarensis
ENSTGUG00000011750	R3HDM1	89	45.880	ENSFHEG00000018713	r3hdm1	100	46.605	Fundulus_heteroclitus
ENSTGUG00000011750	R3HDM1	58	62.446	ENSGMOG00000006042	-	74	64.286	Gadus_morhua
ENSTGUG00000011750	R3HDM1	83	88.235	ENSGALG00000012246	R3HDM1	99	88.197	Gallus_gallus
ENSTGUG00000011750	R3HDM1	79	48.373	ENSGAFG00000006203	r3hdm1	90	49.377	Gambusia_affinis
ENSTGUG00000011750	R3HDM1	86	47.323	ENSGACG00000014925	r3hdm1	99	46.756	Gasterosteus_aculeatus
ENSTGUG00000011750	R3HDM1	100	80.657	ENSGAGG00000007840	R3HDM1	96	87.970	Gopherus_agassizii
ENSTGUG00000011750	R3HDM1	100	73.713	ENSGGOG00000008156	R3HDM1	100	73.984	Gorilla_gorilla
ENSTGUG00000011750	R3HDM1	100	70.000	ENSHGLG00000015718	R3HDM1	99	78.676	Heterocephalus_glaber_female
ENSTGUG00000011750	R3HDM1	100	54.380	ENSHGLG00100015374	-	100	54.015	Heterocephalus_glaber_male
ENSTGUG00000011750	R3HDM1	100	69.825	ENSHGLG00100003184	-	100	77.076	Heterocephalus_glaber_male
ENSTGUG00000011750	R3HDM1	79	43.249	ENSHCOG00000013366	r3hdm1	88	59.901	Hippocampus_comes
ENSTGUG00000011750	R3HDM1	87	65.000	ENSIPUG00000013629	r3hdm1	95	70.159	Ictalurus_punctatus
ENSTGUG00000011750	R3HDM1	81	66.271	ENSIPUG00000001676	R3HDM1	99	66.429	Ictalurus_punctatus
ENSTGUG00000011750	R3HDM1	100	73.532	ENSSTOG00000007572	R3HDM1	99	80.882	Ictidomys_tridecemlineatus
ENSTGUG00000011750	R3HDM1	94	71.230	ENSLACG00000005334	R3HDM1	99	71.389	Latimeria_chalumnae
ENSTGUG00000011750	R3HDM1	100	67.238	ENSLOCG00000001641	r3hdm1	100	67.058	Lepisosteus_oculatus
ENSTGUG00000011750	R3HDM1	100	72.042	ENSLAFG00000009065	R3HDM1	100	71.716	Loxodonta_africana
ENSTGUG00000011750	R3HDM1	92	83.292	ENSMFAG00000030331	R3HDM1	100	73.803	Macaca_fascicularis
ENSTGUG00000011750	R3HDM1	100	73.351	ENSMMUG00000009844	R3HDM1	100	73.622	Macaca_mulatta
ENSTGUG00000011750	R3HDM1	92	83.292	ENSMNEG00000027793	R3HDM1	100	73.713	Macaca_nemestrina
ENSTGUG00000011750	R3HDM1	100	73.532	ENSMLEG00000043189	R3HDM1	100	73.803	Mandrillus_leucophaeus
ENSTGUG00000011750	R3HDM1	89	48.266	ENSMAMG00000004532	r3hdm1	96	48.800	Mastacembelus_armatus
ENSTGUG00000011750	R3HDM1	89	47.834	ENSMZEG00005003157	r3hdm1	96	48.448	Maylandia_zebra
ENSTGUG00000011750	R3HDM1	100	86.551	ENSMGAG00000012461	R3HDM1	100	86.264	Meleagris_gallopavo
ENSTGUG00000011750	R3HDM1	100	70.332	ENSMAUG00000010315	R3hdm1	100	78.738	Mesocricetus_auratus
ENSTGUG00000011750	R3HDM1	100	72.032	ENSMICG00000005900	-	100	74.384	Microcebus_murinus
ENSTGUG00000011750	R3HDM1	88	74.201	ENSMICG00000042655	-	100	74.138	Microcebus_murinus
ENSTGUG00000011750	R3HDM1	90	72.649	ENSMODG00000000923	R3HDM1	97	72.771	Monodelphis_domestica
ENSTGUG00000011750	R3HDM1	99	46.962	ENSMALG00000009000	r3hdm1	100	46.609	Monopterus_albus
ENSTGUG00000011750	R3HDM1	100	70.202	MGP_CAROLIEiJ_G0014543	R3hdm1	99	79.412	Mus_caroli
ENSTGUG00000011750	R3HDM1	100	69.851	ENSMUSG00000056211	R3hdm1	99	79.412	Mus_musculus
ENSTGUG00000011750	R3HDM1	100	70.114	MGP_PahariEiJ_G0027779	R3hdm1	99	79.228	Mus_pahari
ENSTGUG00000011750	R3HDM1	100	69.939	MGP_SPRETEiJ_G0015350	R3hdm1	99	79.412	Mus_spretus
ENSTGUG00000011750	R3HDM1	100	73.827	ENSMPUG00000002412	R3HDM1	100	73.736	Mustela_putorius_furo
ENSTGUG00000011750	R3HDM1	100	72.956	ENSMLUG00000013824	R3HDM1	100	73.136	Myotis_lucifugus
ENSTGUG00000011750	R3HDM1	100	73.442	ENSNLEG00000008622	R3HDM1	100	73.713	Nomascus_leucogenys
ENSTGUG00000011750	R3HDM1	89	65.468	ENSMEUG00000011784	R3HDM1	99	65.776	Notamacropus_eugenii
ENSTGUG00000011750	R3HDM1	100	69.177	ENSODEG00000008607	R3HDM1	100	77.741	Octodon_degus
ENSTGUG00000011750	R3HDM1	94	47.866	ENSONIG00000012017	r3hdm1	99	47.593	Oreochromis_niloticus
ENSTGUG00000011750	R3HDM1	100	76.594	ENSOANG00000007987	R3HDM1	100	76.776	Ornithorhynchus_anatinus
ENSTGUG00000011750	R3HDM1	89	73.529	ENSOCUG00000017366	R3HDM1	98	73.428	Oryctolagus_cuniculus
ENSTGUG00000011750	R3HDM1	89	46.125	ENSORLG00000004297	r3hdm1	96	46.418	Oryzias_latipes
ENSTGUG00000011750	R3HDM1	89	47.019	ENSORLG00015017355	r3hdm1	100	44.197	Oryzias_latipes_hsok
ENSTGUG00000011750	R3HDM1	100	73.442	ENSOGAG00000003136	R3HDM1	100	73.532	Otolemur_garnettii
ENSTGUG00000011750	R3HDM1	100	73.956	ENSOARG00000010788	R3HDM1	100	73.956	Ovis_aries
ENSTGUG00000011750	R3HDM1	100	73.490	ENSPPAG00000027858	R3HDM1	100	73.760	Pan_paniscus
ENSTGUG00000011750	R3HDM1	100	74.051	ENSPPRG00000002626	R3HDM1	100	73.960	Panthera_pardus
ENSTGUG00000011750	R3HDM1	100	74.141	ENSPTIG00000016581	R3HDM1	100	75.123	Panthera_tigris_altaica
ENSTGUG00000011750	R3HDM1	100	73.399	ENSPTRG00000012494	R3HDM1	100	73.670	Pan_troglodytes
ENSTGUG00000011750	R3HDM1	100	73.532	ENSPANG00000026448	R3HDM1	100	73.803	Papio_anubis
ENSTGUG00000011750	R3HDM1	83	74.522	ENSPKIG00000004328	r3hdm1	96	58.076	Paramormyrops_kingsleyae
ENSTGUG00000011750	R3HDM1	100	80.201	ENSPSIG00000012915	R3HDM1	100	80.201	Pelodiscus_sinensis
ENSTGUG00000011750	R3HDM1	100	70.465	ENSPEMG00000015187	R3hdm1	100	78.405	Peromyscus_maniculatus_bairdii
ENSTGUG00000011750	R3HDM1	87	44.831	ENSPMAG00000003369	-	99	45.358	Petromyzon_marinus
ENSTGUG00000011750	R3HDM1	100	76.044	ENSPCIG00000002491	R3HDM1	100	76.316	Phascolarctos_cinereus
ENSTGUG00000011750	R3HDM1	89	45.463	ENSPFOG00000015036	r3hdm1	96	45.797	Poecilia_formosa
ENSTGUG00000011750	R3HDM1	79	48.698	ENSPLAG00000018042	r3hdm1	90	49.321	Poecilia_latipinna
ENSTGUG00000011750	R3HDM1	79	48.860	ENSPMEG00000023947	r3hdm1	90	49.377	Poecilia_mexicana
ENSTGUG00000011750	R3HDM1	89	47.042	ENSPREG00000007902	r3hdm1	93	60.310	Poecilia_reticulata
ENSTGUG00000011750	R3HDM1	100	72.834	ENSPPYG00000012815	R3HDM1	100	73.105	Pongo_abelii
ENSTGUG00000011750	R3HDM1	94	79.697	ENSPCAG00000006208	R3HDM1	94	79.697	Procavia_capensis
ENSTGUG00000011750	R3HDM1	100	70.863	ENSPCOG00000012698	R3HDM1	100	70.773	Propithecus_coquereli
ENSTGUG00000011750	R3HDM1	100	65.347	ENSPVAG00000006098	R3HDM1	100	65.617	Pteropus_vampyrus
ENSTGUG00000011750	R3HDM1	83	75.244	ENSPNAG00000005436	R3HDM1	99	75.163	Pygocentrus_nattereri
ENSTGUG00000011750	R3HDM1	66	38.482	ENSPNAG00000004162	arpp21	91	38.358	Pygocentrus_nattereri
ENSTGUG00000011750	R3HDM1	92	63.934	ENSPNAG00000013952	r3hdm1	100	63.850	Pygocentrus_nattereri
ENSTGUG00000011750	R3HDM1	100	69.676	ENSRNOG00000004099	R3hdm1	100	69.474	Rattus_norvegicus
ENSTGUG00000011750	R3HDM1	100	72.227	ENSRBIG00000033317	R3HDM1	100	74.127	Rhinopithecus_bieti
ENSTGUG00000011750	R3HDM1	100	73.195	ENSRROG00000034534	R3HDM1	100	73.646	Rhinopithecus_roxellana
ENSTGUG00000011750	R3HDM1	100	73.351	ENSSBOG00000020389	R3HDM1	100	75.369	Saimiri_boliviensis_boliviensis
ENSTGUG00000011750	R3HDM1	100	76.572	ENSSHAG00000016999	R3HDM1	100	76.937	Sarcophilus_harrisii
ENSTGUG00000011750	R3HDM1	100	57.838	ENSSFOG00015019851	-	100	58.009	Scleropages_formosus
ENSTGUG00000011750	R3HDM1	100	61.636	ENSSFOG00015014134	r3hdm1	100	61.783	Scleropages_formosus
ENSTGUG00000011750	R3HDM1	89	47.147	ENSSDUG00000010749	r3hdm1	96	47.937	Seriola_dumerili
ENSTGUG00000011750	R3HDM1	99	47.301	ENSSLDG00000004499	r3hdm1	99	47.400	Seriola_lalandi_dorsalis
ENSTGUG00000011750	R3HDM1	65	71.074	ENSSARG00000000352	-	64	71.074	Sorex_araneus
ENSTGUG00000011750	R3HDM1	100	81.187	ENSSPUG00000004167	R3HDM1	100	80.822	Sphenodon_punctatus
ENSTGUG00000011750	R3HDM1	89	48.618	ENSSPAG00000004648	r3hdm1	98	49.258	Stegastes_partitus
ENSTGUG00000011750	R3HDM1	100	73.984	ENSSSCG00000015692	R3HDM1	100	73.893	Sus_scrofa
ENSTGUG00000011750	R3HDM1	79	45.396	ENSTRUG00000011654	r3hdm1	89	45.746	Takifugu_rubripes
ENSTGUG00000011750	R3HDM1	87	45.761	ENSTNIG00000010362	r3hdm1	94	46.383	Tetraodon_nigroviridis
ENSTGUG00000011750	R3HDM1	100	68.478	ENSTTRG00000003935	R3HDM1	100	68.478	Tursiops_truncatus
ENSTGUG00000011750	R3HDM1	70	75.641	ENSUAMG00000024806	R3HDM1	99	78.676	Ursus_americanus
ENSTGUG00000011750	R3HDM1	100	70.370	ENSUMAG00000005552	R3HDM1	100	70.280	Ursus_maritimus
ENSTGUG00000011750	R3HDM1	93	69.938	ENSVPAG00000007333	R3HDM1	93	70.041	Vicugna_pacos
ENSTGUG00000011750	R3HDM1	100	71.779	ENSVVUG00000006457	R3HDM1	100	71.891	Vulpes_vulpes
ENSTGUG00000011750	R3HDM1	90	66.159	ENSXETG00000019330	r3hdm1	100	66.362	Xenopus_tropicalis
ENSTGUG00000011750	R3HDM1	64	50.066	ENSXCOG00000017448	r3hdm1	90	50.135	Xiphophorus_couchianus
ENSTGUG00000011750	R3HDM1	89	45.915	ENSXMAG00000007885	r3hdm1	96	46.784	Xiphophorus_maculatus