EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000011880 (Gene tree)
Gene ID: 100218275
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 60397 bases
Position: chr2:132478382-132538778
Accession: 100218275
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000012245	ResIII	PF04851.15	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000012379	-	2751	XM_002200027	ENSTGUP00000012245	917 (aa)	XP_002200063	H0ZNR8

Gene Model

Click here to download ENSTGUG00000011880's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000011880's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000011880	-	55	31.818	ENSTGUG00000013392	-	52	31.953
ENSTGUG00000011880	-	59	32.113	ENSTGUG00000000524	ERCC6L2	85	31.940
ENSTGUG00000011880	-	55	33.090	ENSTGUG00000003127	SMARCAD1	65	33.086
ENSTGUG00000011880	-	50	31.349	ENSTGUG00000004992	ERCC6L	85	31.349
ENSTGUG00000011880	-	52	33.200	ENSTGUG00000015488	-	55	33.200
ENSTGUG00000011880	-	66	45.032	ENSTGUG00000008233	RAD54L	81	44.960

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000011880	-	99	68.553	ENSG00000197275	RAD54B	99	68.553	Homo_sapiens
ENSTGUG00000011880	-	79	74.483	ENSG00000265817	FSBP	99	74.483	Homo_sapiens
ENSTGUG00000011880	-	99	67.682	ENSAMEG00000005834	-	99	67.682	Ailuropoda_melanoleuca
ENSTGUG00000011880	-	99	57.638	ENSACIG00000013005	rad54b	99	57.638	Amphilophus_citrinellus
ENSTGUG00000011880	-	99	56.416	ENSAOCG00000008523	rad54b	99	56.416	Amphiprion_ocellaris
ENSTGUG00000011880	-	99	56.039	ENSAPEG00000001673	rad54b	99	56.148	Amphiprion_percula
ENSTGUG00000011880	-	99	56.338	ENSATEG00000001527	rad54b	99	56.338	Anabas_testudineus
ENSTGUG00000011880	-	100	87.691	ENSAPLG00000014366	-	99	87.691	Anas_platyrhynchos
ENSTGUG00000011880	-	87	76.071	ENSACAG00000003671	-	98	76.071	Anolis_carolinensis
ENSTGUG00000011880	-	70	74.303	ENSANAG00000019528	-	99	74.303	Aotus_nancymaae
ENSTGUG00000011880	-	99	57.174	ENSACLG00000007826	rad54b	99	57.174	Astatotilapia_calliptera
ENSTGUG00000011880	-	85	60.902	ENSAMXG00000039985	rad54b	95	60.897	Astyanax_mexicanus
ENSTGUG00000011880	-	99	67.101	ENSBTAG00000000632	RAD54B	99	67.101	Bos_taurus
ENSTGUG00000011880	-	79	34.441	WBGene00013792	Y116A8C.13	95	32.151	Caenorhabditis_elegans
ENSTGUG00000011880	-	99	67.822	ENSCJAG00000000080	-	99	74.207	Callithrix_jacchus
ENSTGUG00000011880	-	99	66.993	ENSCAFG00000009179	RAD54B	99	66.993	Canis_familiaris
ENSTGUG00000011880	-	99	67.102	ENSCAFG00020012084	-	99	67.102	Canis_lupus_dingo
ENSTGUG00000011880	-	99	67.065	ENSCHIG00000008230	-	99	67.065	Capra_hircus
ENSTGUG00000011880	-	99	68.004	ENSTSYG00000013234	-	99	68.004	Carlito_syrichta
ENSTGUG00000011880	-	99	67.068	ENSCPOG00000011643	-	99	67.068	Cavia_porcellus
ENSTGUG00000011880	-	99	68.256	ENSCCAG00000011754	-	99	74.483	Cebus_capucinus
ENSTGUG00000011880	-	99	68.290	ENSCATG00000030661	-	99	74.069	Cercocebus_atys
ENSTGUG00000011880	-	99	66.449	ENSCLAG00000010476	-	99	66.449	Chinchilla_lanigera
ENSTGUG00000011880	-	99	68.182	ENSCSAG00000012712	-	99	68.182	Chlorocebus_sabaeus
ENSTGUG00000011880	-	100	77.826	ENSCPBG00000003204	-	99	77.882	Chrysemys_picta_bellii
ENSTGUG00000011880	-	99	68.074	ENSCANG00000017939	-	99	74.345	Colobus_angolensis_palliatus
ENSTGUG00000011880	-	99	64.853	ENSCGRG00001020184	Rad54b	99	64.853	Cricetulus_griseus_chok1gshd
ENSTGUG00000011880	-	99	63.656	ENSCGRG00000016752	Rad54b	99	63.656	Cricetulus_griseus_crigri
ENSTGUG00000011880	-	88	60.197	ENSCSEG00000001601	rad54b	98	87.500	Cynoglossus_semilaevis
ENSTGUG00000011880	-	99	58.868	ENSCVAG00000009200	rad54b	99	58.868	Cyprinodon_variegatus
ENSTGUG00000011880	-	88	59.656	ENSDARG00000092134	rad54b	99	61.883	Danio_rerio
ENSTGUG00000011880	-	99	67.454	ENSDNOG00000015535	-	99	67.454	Dasypus_novemcinctus
ENSTGUG00000011880	-	99	66.958	ENSDORG00000002492	Rad54b	99	66.958	Dipodomys_ordii
ENSTGUG00000011880	-	87	66.834	ENSETEG00000010605	-	100	66.834	Echinops_telfairi
ENSTGUG00000011880	-	99	46.386	ENSEBUG00000009104	rad54b	98	46.378	Eptatretus_burgeri
ENSTGUG00000011880	-	94	68.083	ENSEASG00005004021	-	97	68.083	Equus_asinus_asinus
ENSTGUG00000011880	-	99	66.595	ENSECAG00000021949	-	99	66.595	Equus_caballus
ENSTGUG00000011880	-	71	73.585	ENSEEUG00000008056	-	72	73.585	Erinaceus_europaeus
ENSTGUG00000011880	-	99	54.057	ENSELUG00000009287	rad54b	99	54.202	Esox_lucius
ENSTGUG00000011880	-	99	67.135	ENSFCAG00000015513	-	99	73.901	Felis_catus
ENSTGUG00000011880	-	100	93.784	ENSFALG00000005467	-	99	93.784	Ficedula_albicollis
ENSTGUG00000011880	-	99	66.810	ENSFDAG00000020541	-	100	66.810	Fukomys_damarensis
ENSTGUG00000011880	-	86	60.755	ENSFHEG00000014382	rad54b	86	60.755	Fundulus_heteroclitus
ENSTGUG00000011880	-	85	60.576	ENSGMOG00000014774	rad54b	98	60.576	Gadus_morhua
ENSTGUG00000011880	-	100	85.730	ENSGALG00000043597	RAD54B	99	85.730	Gallus_gallus
ENSTGUG00000011880	-	99	58.089	ENSGAFG00000007901	rad54b	99	58.089	Gambusia_affinis
ENSTGUG00000011880	-	100	56.897	ENSGACG00000009128	rad54b	100	56.897	Gasterosteus_aculeatus
ENSTGUG00000011880	-	100	77.657	ENSGAGG00000018747	-	99	77.657	Gopherus_agassizii
ENSTGUG00000011880	-	99	68.506	ENSGGOG00000023516	-	99	68.506	Gorilla_gorilla
ENSTGUG00000011880	-	99	56.310	ENSHBUG00000016017	rad54b	99	56.310	Haplochromis_burtoni
ENSTGUG00000011880	-	99	66.774	ENSHGLG00000008263	RAD54B	99	66.774	Heterocephalus_glaber_female
ENSTGUG00000011880	-	99	66.132	ENSHGLG00100008108	-	99	66.132	Heterocephalus_glaber_male
ENSTGUG00000011880	-	100	55.328	ENSHCOG00000004764	rad54b	98	57.791	Hippocampus_comes
ENSTGUG00000011880	-	99	54.984	ENSIPUG00000018531	rad54b	99	54.984	Ictalurus_punctatus
ENSTGUG00000011880	-	100	66.449	ENSSTOG00000010791	-	99	66.449	Ictidomys_tridecemlineatus
ENSTGUG00000011880	-	99	67.029	ENSJJAG00000010314	Rad54b	99	67.029	Jaculus_jaculus
ENSTGUG00000011880	-	86	60.809	ENSKMAG00000004744	rad54b	91	60.809	Kryptolebias_marmoratus
ENSTGUG00000011880	-	81	70.916	ENSLACG00000000859	-	100	70.916	Latimeria_chalumnae
ENSTGUG00000011880	-	99	61.129	ENSLOCG00000010100	rad54b	94	67.459	Lepisosteus_oculatus
ENSTGUG00000011880	-	87	71.267	ENSLAFG00000015315	-	98	71.267	Loxodonta_africana
ENSTGUG00000011880	-	99	68.290	ENSMFAG00000031629	-	99	74.069	Macaca_fascicularis
ENSTGUG00000011880	-	99	68.290	ENSMMUG00000005659	-	99	68.290	Macaca_mulatta
ENSTGUG00000011880	-	99	68.256	ENSMNEG00000016408	-	99	68.256	Macaca_nemestrina
ENSTGUG00000011880	-	99	68.627	ENSMLEG00000006946	-	99	68.627	Mandrillus_leucophaeus
ENSTGUG00000011880	-	99	56.634	ENSMAMG00000012269	rad54b	99	56.634	Mastacembelus_armatus
ENSTGUG00000011880	-	99	56.416	ENSMZEG00005005281	rad54b	94	61.839	Maylandia_zebra
ENSTGUG00000011880	-	100	85.403	ENSMGAG00000012024	-	99	85.403	Meleagris_gallopavo
ENSTGUG00000011880	-	99	65.755	ENSMAUG00000013586	Rad54b	99	65.755	Mesocricetus_auratus
ENSTGUG00000011880	-	87	73.400	ENSMICG00000000754	-	91	73.400	Microcebus_murinus
ENSTGUG00000011880	-	99	64.333	ENSMOCG00000020035	Rad54b	99	64.333	Microtus_ochrogaster
ENSTGUG00000011880	-	88	59.613	ENSMMOG00000003394	rad54b	92	59.613	Mola_mola
ENSTGUG00000011880	-	88	72.615	ENSMODG00000007343	-	99	72.615	Monodelphis_domestica
ENSTGUG00000011880	-	70	61.051	ENSMALG00000001520	rad54b	99	61.051	Monopterus_albus
ENSTGUG00000011880	-	99	64.513	MGP_CAROLIEiJ_G0025810	Rad54b	99	64.513	Mus_caroli
ENSTGUG00000011880	-	99	64.732	ENSMUSG00000078773	Rad54b	99	64.513	Mus_musculus
ENSTGUG00000011880	-	99	64.841	MGP_PahariEiJ_G0023933	Rad54b	99	64.732	Mus_pahari
ENSTGUG00000011880	-	99	65.498	MGP_SPRETEiJ_G0026758	Rad54b	99	65.498	Mus_spretus
ENSTGUG00000011880	-	88	72.649	ENSMPUG00000008878	-	99	72.649	Mustela_putorius_furo
ENSTGUG00000011880	-	99	66.739	ENSMLUG00000008953	-	99	66.739	Myotis_lucifugus
ENSTGUG00000011880	-	99	66.196	ENSNGAG00000017537	Rad54b	99	66.196	Nannospalax_galili
ENSTGUG00000011880	-	99	57.283	ENSNBRG00000013394	rad54b	99	57.283	Neolamprologus_brichardi
ENSTGUG00000011880	-	99	67.857	ENSNLEG00000003062	-	99	74.069	Nomascus_leucogenys
ENSTGUG00000011880	-	71	70.370	ENSMEUG00000012426	-	71	70.370	Notamacropus_eugenii
ENSTGUG00000011880	-	99	66.703	ENSODEG00000019564	-	99	66.703	Octodon_degus
ENSTGUG00000011880	-	76	80.851	ENSODEG00000002650	-	93	80.851	Octodon_degus
ENSTGUG00000011880	-	99	57.553	ENSONIG00000006067	rad54b	99	57.553	Oreochromis_niloticus
ENSTGUG00000011880	-	82	76.298	ENSOANG00000011348	-	99	76.298	Ornithorhynchus_anatinus
ENSTGUG00000011880	-	99	65.659	ENSOCUG00000016478	-	99	65.659	Oryctolagus_cuniculus
ENSTGUG00000011880	-	99	56.782	ENSORLG00000008918	rad54b	99	64.861	Oryzias_latipes
ENSTGUG00000011880	-	70	64.706	ENSORLG00020012171	rad54b	99	64.706	Oryzias_latipes_hni
ENSTGUG00000011880	-	99	56.782	ENSORLG00015018536	rad54b	99	56.782	Oryzias_latipes_hsok
ENSTGUG00000011880	-	84	62.259	ENSOMEG00000004345	rad54b	99	62.259	Oryzias_melastigma
ENSTGUG00000011880	-	99	66.594	ENSOGAG00000007854	-	99	66.594	Otolemur_garnettii
ENSTGUG00000011880	-	87	72.105	ENSOARG00000007691	-	98	72.105	Ovis_aries
ENSTGUG00000011880	-	99	66.921	ENSPPAG00000029572	-	99	66.921	Pan_paniscus
ENSTGUG00000011880	-	99	67.243	ENSPPRG00000007571	-	99	73.901	Panthera_pardus
ENSTGUG00000011880	-	79	73.901	ENSPTIG00000012670	-	99	73.901	Panthera_tigris_altaica
ENSTGUG00000011880	-	99	68.226	ENSPTRG00000020427	-	99	74.345	Pan_troglodytes
ENSTGUG00000011880	-	99	68.398	ENSPANG00000019566	-	99	68.398	Papio_anubis
ENSTGUG00000011880	-	100	59.572	ENSPKIG00000014974	rad54b	99	59.572	Paramormyrops_kingsleyae
ENSTGUG00000011880	-	100	73.861	ENSPSIG00000002383	-	99	78.213	Pelodiscus_sinensis
ENSTGUG00000011880	-	99	64.770	ENSPEMG00000012133	Rad54b	99	64.770	Peromyscus_maniculatus_bairdii
ENSTGUG00000011880	-	86	59.125	ENSPMAG00000002916	rad54b	99	59.250	Petromyzon_marinus
ENSTGUG00000011880	-	88	73.383	ENSPCIG00000020151	-	94	72.637	Phascolarctos_cinereus
ENSTGUG00000011880	-	99	57.595	ENSPFOG00000023411	rad54b	99	57.595	Poecilia_formosa
ENSTGUG00000011880	-	99	57.700	ENSPLAG00000010430	rad54b	99	57.700	Poecilia_latipinna
ENSTGUG00000011880	-	99	57.413	ENSPMEG00000016873	rad54b	98	63.158	Poecilia_mexicana
ENSTGUG00000011880	-	99	57.375	ENSPREG00000018443	rad54b	99	57.375	Poecilia_reticulata
ENSTGUG00000011880	-	99	68.280	ENSPPYG00000018750	-	99	68.280	Pongo_abelii
ENSTGUG00000011880	-	99	67.570	ENSPCOG00000026845	-	99	72.966	Propithecus_coquereli
ENSTGUG00000011880	-	81	72.752	ENSPVAG00000000261	-	86	72.752	Pteropus_vampyrus
ENSTGUG00000011880	-	86	61.917	ENSPNYG00000018303	rad54b	96	61.917	Pundamilia_nyererei
ENSTGUG00000011880	-	99	56.959	ENSPNAG00000000295	rad54b	99	56.959	Pygocentrus_nattereri
ENSTGUG00000011880	-	99	64.442	ENSRNOG00000039949	Rad54b	99	64.442	Rattus_norvegicus
ENSTGUG00000011880	-	99	67.532	ENSRBIG00000020419	-	99	67.532	Rhinopithecus_bieti
ENSTGUG00000011880	-	99	67.424	ENSRROG00000039897	-	99	67.424	Rhinopithecus_roxellana
ENSTGUG00000011880	-	85	35.819	YBR073W	RDH54	68	39.265	Saccharomyces_cerevisiae
ENSTGUG00000011880	-	99	67.570	ENSSBOG00000028501	-	99	67.570	Saimiri_boliviensis_boliviensis
ENSTGUG00000011880	-	99	67.791	ENSSHAG00000017038	-	99	67.791	Sarcophilus_harrisii
ENSTGUG00000011880	-	65	66.337	ENSSFOG00015008483	rad54b	93	66.337	Scleropages_formosus
ENSTGUG00000011880	-	99	55.556	ENSSMAG00000018659	rad54b	99	56.725	Scophthalmus_maximus
ENSTGUG00000011880	-	97	56.230	ENSSDUG00000001122	rad54b	96	56.494	Seriola_dumerili
ENSTGUG00000011880	-	99	55.777	ENSSLDG00000013787	rad54b	99	56.034	Seriola_lalandi_dorsalis
ENSTGUG00000011880	-	100	75.027	ENSSPUG00000016497	-	99	75.027	Sphenodon_punctatus
ENSTGUG00000011880	-	99	58.009	ENSSPAG00000012800	rad54b	99	58.009	Stegastes_partitus
ENSTGUG00000011880	-	99	66.992	ENSSSCG00000006101	-	99	73.091	Sus_scrofa
ENSTGUG00000011880	-	99	55.288	ENSTRUG00000010015	rad54b	99	55.335	Takifugu_rubripes
ENSTGUG00000011880	-	99	63.192	ENSTTRG00000006312	-	99	63.192	Tursiops_truncatus
ENSTGUG00000011880	-	99	67.900	ENSUMAG00000016401	-	99	67.900	Ursus_maritimus
ENSTGUG00000011880	-	99	66.594	ENSVPAG00000003157	-	99	66.594	Vicugna_pacos
ENSTGUG00000011880	-	99	55.043	ENSXETG00000025924	rad54b	99	59.748	Xenopus_tropicalis
ENSTGUG00000011880	-	99	57.622	ENSXMAG00000013141	rad54b	99	57.622	Xiphophorus_maculatus