EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000011945 (Gene tree)
Gene ID: 100225763
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 32710 bases
Position: chr5:36009057-36041766
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000012323	SRP54	PF00448.22	1.8e-77	1	1
ENSTGUP00000012323	SRP54_N	PF02881.19	1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000012459	-	2073	-	ENSTGUP00000012323	500 (aa)	-	H0ZNZ4

Gene Model

Click here to download ENSTGUG00000011945's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000011945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000011945	-	95	98.734	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSTGUG00000011945	-	95	95.148	ENSAPOG00000011314	srp54	94	95.148	Acanthochromis_polyacanthus
ENSTGUG00000011945	-	95	98.734	ENSAMEG00000015544	SRP54	94	98.734	Ailuropoda_melanoleuca
ENSTGUG00000011945	-	90	93.987	ENSACIG00000022831	srp54	97	93.987	Amphilophus_citrinellus
ENSTGUG00000011945	-	95	95.148	ENSAOCG00000019401	srp54	94	95.148	Amphiprion_ocellaris
ENSTGUG00000011945	-	95	95.148	ENSAPEG00000001977	srp54	94	95.148	Amphiprion_percula
ENSTGUG00000011945	-	95	95.570	ENSATEG00000013877	srp54	94	95.570	Anabas_testudineus
ENSTGUG00000011945	-	100	100.000	ENSAPLG00000010125	SRP54	100	100.000	Anas_platyrhynchos
ENSTGUG00000011945	-	59	82.609	ENSACAG00000001124	-	90	82.609	Anolis_carolinensis
ENSTGUG00000011945	-	95	98.945	ENSACAG00000002103	-	94	98.945	Anolis_carolinensis
ENSTGUG00000011945	-	81	95.792	ENSACAG00000010631	-	93	95.792	Anolis_carolinensis
ENSTGUG00000011945	-	100	98.800	ENSANAG00000022133	SRP54	97	98.800	Aotus_nancymaae
ENSTGUG00000011945	-	95	95.359	ENSACLG00000015866	srp54	94	95.359	Astatotilapia_calliptera
ENSTGUG00000011945	-	95	95.359	ENSAMXG00000032669	SRP54	94	95.359	Astyanax_mexicanus
ENSTGUG00000011945	-	95	98.734	ENSBTAG00000019085	SRP54	94	98.734	Bos_taurus
ENSTGUG00000011945	-	95	71.908	WBGene00009012	F21D5.7	96	71.908	Caenorhabditis_elegans
ENSTGUG00000011945	-	100	98.800	ENSCJAG00000006581	SRP54	97	98.800	Callithrix_jacchus
ENSTGUG00000011945	-	95	98.734	ENSCAFG00000013331	SRP54	94	98.734	Canis_familiaris
ENSTGUG00000011945	-	95	98.734	ENSCAFG00020023427	SRP54	94	98.734	Canis_lupus_dingo
ENSTGUG00000011945	-	95	98.734	ENSCHIG00000026345	SRP54	94	98.734	Capra_hircus
ENSTGUG00000011945	-	100	98.800	ENSTSYG00000002680	-	97	98.800	Carlito_syrichta
ENSTGUG00000011945	-	99	85.455	ENSTSYG00000035333	-	97	85.455	Carlito_syrichta
ENSTGUG00000011945	-	95	63.469	ENSCAPG00000008780	SRP54	100	63.469	Cavia_aperea
ENSTGUG00000011945	-	95	98.312	ENSCPOG00000003691	SRP54	94	98.312	Cavia_porcellus
ENSTGUG00000011945	-	85	98.205	ENSCCAG00000024179	SRP54	93	98.458	Cebus_capucinus
ENSTGUG00000011945	-	100	98.800	ENSCATG00000034083	SRP54	95	98.800	Cercocebus_atys
ENSTGUG00000011945	-	95	98.734	ENSCLAG00000015076	SRP54	94	98.734	Chinchilla_lanigera
ENSTGUG00000011945	-	95	98.734	ENSCSAG00000015575	SRP54	94	98.734	Chlorocebus_sabaeus
ENSTGUG00000011945	-	95	86.498	ENSCHOG00000008986	SRP54	99	86.498	Choloepus_hoffmanni
ENSTGUG00000011945	-	95	99.578	ENSCPBG00000026195	SRP54	94	99.578	Chrysemys_picta_bellii
ENSTGUG00000011945	-	95	82.700	ENSCING00000007380	-	94	82.700	Ciona_intestinalis
ENSTGUG00000011945	-	100	98.800	ENSCANG00000028532	SRP54	97	98.800	Colobus_angolensis_palliatus
ENSTGUG00000011945	-	95	98.312	ENSCGRG00001009525	-	94	98.312	Cricetulus_griseus_chok1gshd
ENSTGUG00000011945	-	77	98.701	ENSCGRG00000009453	-	89	98.701	Cricetulus_griseus_crigri
ENSTGUG00000011945	-	95	94.515	ENSCSEG00000012392	srp54	94	94.515	Cynoglossus_semilaevis
ENSTGUG00000011945	-	95	95.148	ENSCVAG00000010395	srp54	94	95.148	Cyprinodon_variegatus
ENSTGUG00000011945	-	95	95.359	ENSDARG00000098367	srp54	94	95.359	Danio_rerio
ENSTGUG00000011945	-	95	98.734	ENSDNOG00000032525	SRP54	94	98.734	Dasypus_novemcinctus
ENSTGUG00000011945	-	90	84.513	ENSDORG00000005159	-	98	84.513	Dipodomys_ordii
ENSTGUG00000011945	-	95	77.637	FBgn0010747	Srp54k	93	77.637	Drosophila_melanogaster
ENSTGUG00000011945	-	78	56.298	ENSETEG00000012102	-	93	56.298	Echinops_telfairi
ENSTGUG00000011945	-	95	97.468	ENSETEG00000016307	-	94	97.468	Echinops_telfairi
ENSTGUG00000011945	-	95	88.819	ENSEBUG00000009437	-	94	88.819	Eptatretus_burgeri
ENSTGUG00000011945	-	95	98.734	ENSEASG00005002057	SRP54	94	98.734	Equus_asinus_asinus
ENSTGUG00000011945	-	95	98.734	ENSECAG00000018042	SRP54	93	98.734	Equus_caballus
ENSTGUG00000011945	-	95	81.435	ENSEEUG00000001511	SRP54	94	81.435	Erinaceus_europaeus
ENSTGUG00000011945	-	95	94.515	ENSELUG00000003395	srp54	94	94.515	Esox_lucius
ENSTGUG00000011945	-	95	98.523	ENSFCAG00000032033	SRP54	94	98.523	Felis_catus
ENSTGUG00000011945	-	95	100.000	ENSFALG00000005995	SRP54	94	100.000	Ficedula_albicollis
ENSTGUG00000011945	-	95	98.734	ENSFDAG00000016767	SRP54	95	98.734	Fukomys_damarensis
ENSTGUG00000011945	-	95	94.726	ENSFHEG00000004263	srp54	94	94.726	Fundulus_heteroclitus
ENSTGUG00000011945	-	90	89.062	ENSGMOG00000011391	srp54	94	89.062	Gadus_morhua
ENSTGUG00000011945	-	95	100.000	ENSGALG00000023135	SRP54	94	100.000	Gallus_gallus
ENSTGUG00000011945	-	95	95.359	ENSGAFG00000011586	srp54	94	95.359	Gambusia_affinis
ENSTGUG00000011945	-	95	94.726	ENSGACG00000004181	srp54	100	94.470	Gasterosteus_aculeatus
ENSTGUG00000011945	-	95	99.578	ENSGAGG00000014766	SRP54	94	99.578	Gopherus_agassizii
ENSTGUG00000011945	-	95	98.734	ENSGGOG00000002926	SRP54	94	98.734	Gorilla_gorilla
ENSTGUG00000011945	-	95	95.359	ENSHBUG00000005678	srp54	94	95.359	Haplochromis_burtoni
ENSTGUG00000011945	-	95	98.734	ENSHGLG00000002850	SRP54	94	98.734	Heterocephalus_glaber_female
ENSTGUG00000011945	-	95	98.734	ENSHGLG00100005263	SRP54	94	98.734	Heterocephalus_glaber_male
ENSTGUG00000011945	-	95	66.105	ENSHGLG00100007281	-	93	66.105	Heterocephalus_glaber_male
ENSTGUG00000011945	-	95	93.460	ENSHCOG00000021127	srp54	94	93.460	Hippocampus_comes
ENSTGUG00000011945	-	95	94.937	ENSIPUG00000001420	srp54	94	94.937	Ictalurus_punctatus
ENSTGUG00000011945	-	95	98.734	ENSSTOG00000016023	SRP54	94	98.734	Ictidomys_tridecemlineatus
ENSTGUG00000011945	-	95	93.249	ENSJJAG00000013417	-	94	93.249	Jaculus_jaculus
ENSTGUG00000011945	-	82	74.390	ENSJJAG00000016404	-	92	74.390	Jaculus_jaculus
ENSTGUG00000011945	-	95	94.726	ENSKMAG00000007707	srp54	94	94.726	Kryptolebias_marmoratus
ENSTGUG00000011945	-	95	95.148	ENSLBEG00000021122	srp54	94	95.148	Labrus_bergylta
ENSTGUG00000011945	-	95	95.148	ENSLBEG00000018690	srp54	94	95.148	Labrus_bergylta
ENSTGUG00000011945	-	95	95.992	ENSLACG00000017890	SRP54	94	95.992	Latimeria_chalumnae
ENSTGUG00000011945	-	95	96.203	ENSLOCG00000009440	srp54	94	96.203	Lepisosteus_oculatus
ENSTGUG00000011945	-	95	98.734	ENSLAFG00000012007	SRP54	94	98.734	Loxodonta_africana
ENSTGUG00000011945	-	100	98.800	ENSMFAG00000044371	SRP54	95	98.800	Macaca_fascicularis
ENSTGUG00000011945	-	100	98.800	ENSMMUG00000015073	FAM177A1	95	98.800	Macaca_mulatta
ENSTGUG00000011945	-	100	98.800	ENSMNEG00000006947	SRP54	95	98.800	Macaca_nemestrina
ENSTGUG00000011945	-	100	98.800	ENSMLEG00000042251	SRP54	95	98.800	Mandrillus_leucophaeus
ENSTGUG00000011945	-	95	95.359	ENSMAMG00000004803	srp54	94	95.359	Mastacembelus_armatus
ENSTGUG00000011945	-	95	95.359	ENSMZEG00005027528	srp54	94	95.359	Maylandia_zebra
ENSTGUG00000011945	-	95	94.958	ENSMGAG00000012481	SRP54	94	94.958	Meleagris_gallopavo
ENSTGUG00000011945	-	95	98.523	ENSMAUG00000014447	-	94	98.523	Mesocricetus_auratus
ENSTGUG00000011945	-	100	98.800	ENSMICG00000010270	SRP54	97	98.800	Microcebus_murinus
ENSTGUG00000011945	-	82	98.293	ENSMOCG00000000948	-	93	98.293	Microtus_ochrogaster
ENSTGUG00000011945	-	91	92.511	ENSMMOG00000020303	srp54	99	92.511	Mola_mola
ENSTGUG00000011945	-	95	98.523	ENSMODG00000023150	-	94	98.523	Monodelphis_domestica
ENSTGUG00000011945	-	95	98.523	ENSMODG00000012925	-	94	98.523	Monodelphis_domestica
ENSTGUG00000011945	-	89	94.808	ENSMALG00000009163	srp54	98	94.808	Monopterus_albus
ENSTGUG00000011945	-	95	98.523	MGP_CAROLIEiJ_G0017754	-	94	98.523	Mus_caroli
ENSTGUG00000011945	-	95	98.523	ENSMUSG00000073079	Srp54a	100	99.091	Mus_musculus
ENSTGUG00000011945	-	95	98.523	ENSMUSG00000112449	Srp54b	94	98.523	Mus_musculus
ENSTGUG00000011945	-	95	97.679	ENSMUSG00000079108	Srp54c	94	97.679	Mus_musculus
ENSTGUG00000011945	-	95	98.523	MGP_PahariEiJ_G0029510	-	94	98.523	Mus_pahari
ENSTGUG00000011945	-	95	98.734	ENSMPUG00000016302	SRP54	94	98.734	Mustela_putorius_furo
ENSTGUG00000011945	-	95	98.101	ENSMLUG00000008958	SRP54	94	98.101	Myotis_lucifugus
ENSTGUG00000011945	-	95	87.975	ENSNGAG00000019806	-	93	87.975	Nannospalax_galili
ENSTGUG00000011945	-	82	94.878	ENSNBRG00000006000	srp54	93	94.878	Neolamprologus_brichardi
ENSTGUG00000011945	-	100	98.800	ENSNLEG00000003496	SRP54	97	98.800	Nomascus_leucogenys
ENSTGUG00000011945	-	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSTGUG00000011945	-	52	100.000	ENSOPRG00000014502	-	54	100.000	Ochotona_princeps
ENSTGUG00000011945	-	95	98.734	ENSODEG00000004865	SRP54	94	98.734	Octodon_degus
ENSTGUG00000011945	-	95	95.359	ENSONIG00000011768	srp54	94	95.359	Oreochromis_niloticus
ENSTGUG00000011945	-	95	98.734	ENSOANG00000014051	SRP54	94	98.734	Ornithorhynchus_anatinus
ENSTGUG00000011945	-	95	98.312	ENSOCUG00000007838	SRP54	94	98.312	Oryctolagus_cuniculus
ENSTGUG00000011945	-	95	95.148	ENSORLG00000010027	srp54	94	95.148	Oryzias_latipes
ENSTGUG00000011945	-	95	95.148	ENSORLG00020001878	srp54	94	95.148	Oryzias_latipes_hni
ENSTGUG00000011945	-	95	95.148	ENSORLG00015021866	srp54	94	95.148	Oryzias_latipes_hsok
ENSTGUG00000011945	-	95	94.937	ENSOMEG00000020952	srp54	94	94.937	Oryzias_melastigma
ENSTGUG00000011945	-	95	98.734	ENSOGAG00000012188	SRP54	94	98.734	Otolemur_garnettii
ENSTGUG00000011945	-	95	98.734	ENSOARG00000007160	SRP54	94	98.734	Ovis_aries
ENSTGUG00000011945	-	95	98.734	ENSPPAG00000017434	SRP54	94	98.734	Pan_paniscus
ENSTGUG00000011945	-	95	97.468	ENSPPRG00000014047	SRP54	94	97.468	Panthera_pardus
ENSTGUG00000011945	-	95	98.523	ENSPTIG00000000744	SRP54	90	98.523	Panthera_tigris_altaica
ENSTGUG00000011945	-	95	98.734	ENSPTRG00000006259	FAM177A1	94	98.734	Pan_troglodytes
ENSTGUG00000011945	-	100	98.800	ENSPANG00000023853	SRP54	95	98.800	Papio_anubis
ENSTGUG00000011945	-	95	94.937	ENSPKIG00000001953	srp54	94	94.937	Paramormyrops_kingsleyae
ENSTGUG00000011945	-	95	99.367	ENSPSIG00000006476	SRP54	94	99.367	Pelodiscus_sinensis
ENSTGUG00000011945	-	92	92.174	ENSPMGG00000004127	srp54	99	92.174	Periophthalmus_magnuspinnatus
ENSTGUG00000011945	-	95	85.654	ENSPEMG00000019634	-	94	85.654	Peromyscus_maniculatus_bairdii
ENSTGUG00000011945	-	95	90.295	ENSPMAG00000006078	-	94	90.295	Petromyzon_marinus
ENSTGUG00000011945	-	95	98.523	ENSPCIG00000016175	SRP54	94	98.523	Phascolarctos_cinereus
ENSTGUG00000011945	-	95	95.359	ENSPFOG00000008870	srp54	94	95.359	Poecilia_formosa
ENSTGUG00000011945	-	95	95.359	ENSPLAG00000009889	srp54	94	95.359	Poecilia_latipinna
ENSTGUG00000011945	-	95	95.359	ENSPMEG00000008601	srp54	94	95.359	Poecilia_mexicana
ENSTGUG00000011945	-	95	95.359	ENSPREG00000004505	srp54	94	95.359	Poecilia_reticulata
ENSTGUG00000011945	-	95	93.249	ENSPPYG00000005739	SRP54	94	93.249	Pongo_abelii
ENSTGUG00000011945	-	95	94.304	ENSPCAG00000006268	SRP54	94	94.304	Procavia_capensis
ENSTGUG00000011945	-	100	96.806	ENSPCOG00000022473	SRP54	97	96.806	Propithecus_coquereli
ENSTGUG00000011945	-	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSTGUG00000011945	-	95	95.359	ENSPNYG00000009717	srp54	94	95.359	Pundamilia_nyererei
ENSTGUG00000011945	-	95	95.570	ENSPNAG00000008544	srp54	94	95.570	Pygocentrus_nattereri
ENSTGUG00000011945	-	95	98.734	ENSRNOG00000032776	Srp54a	94	98.734	Rattus_norvegicus
ENSTGUG00000011945	-	100	98.800	ENSRROG00000041292	SRP54	97	98.800	Rhinopithecus_roxellana
ENSTGUG00000011945	-	86	52.834	YPR088C	SRP54	81	52.834	Saccharomyces_cerevisiae
ENSTGUG00000011945	-	96	97.908	ENSSBOG00000035145	SRP54	95	97.908	Saimiri_boliviensis_boliviensis
ENSTGUG00000011945	-	63	99.042	ENSSHAG00000000671	SRP54	91	99.042	Sarcophilus_harrisii
ENSTGUG00000011945	-	95	95.570	ENSSFOG00015013920	srp54	94	95.570	Scleropages_formosus
ENSTGUG00000011945	-	95	94.515	ENSSMAG00000002441	srp54	89	94.515	Scophthalmus_maximus
ENSTGUG00000011945	-	95	94.937	ENSSDUG00000018586	srp54	94	94.937	Seriola_dumerili
ENSTGUG00000011945	-	95	94.726	ENSSLDG00000010476	srp54	94	94.726	Seriola_lalandi_dorsalis
ENSTGUG00000011945	-	95	98.734	ENSSARG00000002744	SRP54	94	98.734	Sorex_araneus
ENSTGUG00000011945	-	95	99.578	ENSSPUG00000013101	SRP54	94	99.578	Sphenodon_punctatus
ENSTGUG00000011945	-	95	95.148	ENSSPAG00000002354	srp54	94	95.148	Stegastes_partitus
ENSTGUG00000011945	-	95	98.734	ENSSSCG00000001955	SRP54	94	98.734	Sus_scrofa
ENSTGUG00000011945	-	95	94.515	ENSTRUG00000007057	srp54	94	94.515	Takifugu_rubripes
ENSTGUG00000011945	-	95	94.304	ENSTNIG00000002589	srp54	94	94.304	Tetraodon_nigroviridis
ENSTGUG00000011945	-	83	89.448	ENSTBEG00000011409	SRP54	93	89.448	Tupaia_belangeri
ENSTGUG00000011945	-	95	87.975	ENSTTRG00000000928	SRP54	94	87.975	Tursiops_truncatus
ENSTGUG00000011945	-	52	98.855	ENSUAMG00000012385	SRP54	100	98.855	Ursus_americanus
ENSTGUG00000011945	-	95	98.734	ENSUMAG00000011234	SRP54	94	98.734	Ursus_maritimus
ENSTGUG00000011945	-	95	98.523	ENSVPAG00000005668	SRP54	100	98.523	Vicugna_pacos
ENSTGUG00000011945	-	95	98.734	ENSVVUG00000019962	SRP54	94	98.734	Vulpes_vulpes
ENSTGUG00000011945	-	95	80.713	ENSXETG00000012290	srp54	94	80.713	Xenopus_tropicalis
ENSTGUG00000011945	-	89	95.260	ENSXCOG00000004658	srp54	96	95.260	Xiphophorus_couchianus
ENSTGUG00000011945	-	95	95.359	ENSXMAG00000018315	srp54	94	95.359	Xiphophorus_maculatus