EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000012047 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 12893 bases
Position: chr1A:64742865-64755757
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000012410	CSD	PF00313.22	2.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000012548	YBX3-201	1413	-	ENSTGUP00000012410	283 (aa)	-	H0ZP80

Gene Model

Click here to download ENSTGUG00000012047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000012047's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000012047	YBX3	74	98.077	ENSG00000060138	YBX3	98	90.000	Homo_sapiens
ENSTGUG00000012047	YBX3	100	67.719	ENSAMEG00000009393	YBX3	81	68.421	Ailuropoda_melanoleuca
ENSTGUG00000012047	YBX3	100	71.959	ENSAPLG00000003147	YBX3	100	71.959	Anas_platyrhynchos
ENSTGUG00000012047	YBX3	61	83.333	ENSANAG00000033366	-	63	83.333	Aotus_nancymaae
ENSTGUG00000012047	YBX3	75	97.143	ENSANAG00000024492	-	71	97.143	Aotus_nancymaae
ENSTGUG00000012047	YBX3	100	67.368	ENSBTAG00000009663	YBX3	75	64.912	Bos_taurus
ENSTGUG00000012047	YBX3	50	91.781	ENSCJAG00000033824	-	53	92.647	Callithrix_jacchus
ENSTGUG00000012047	YBX3	74	98.077	ENSCJAG00000021660	-	70	98.077	Callithrix_jacchus
ENSTGUG00000012047	YBX3	75	97.143	ENSCAFG00000013401	YBX3	98	97.143	Canis_familiaris
ENSTGUG00000012047	YBX3	100	64.211	ENSCAFG00020006412	YBX3	69	87.619	Canis_lupus_dingo
ENSTGUG00000012047	YBX3	100	67.018	ENSCHIG00000010863	YBX3	79	67.719	Capra_hircus
ENSTGUG00000012047	YBX3	75	97.143	ENSTSYG00000004204	-	83	97.143	Carlito_syrichta
ENSTGUG00000012047	YBX3	68	96.552	ENSTSYG00000035821	-	70	98.765	Carlito_syrichta
ENSTGUG00000012047	YBX3	75	97.143	ENSCPOG00000011329	YBX3	79	97.143	Cavia_porcellus
ENSTGUG00000012047	YBX3	74	98.077	ENSCCAG00000016469	YBX3	70	98.077	Cebus_capucinus
ENSTGUG00000012047	YBX3	74	98.077	ENSCATG00000034411	YBX3	70	98.077	Cercocebus_atys
ENSTGUG00000012047	YBX3	100	67.133	ENSCLAG00000016030	YBX3	93	67.133	Chinchilla_lanigera
ENSTGUG00000012047	YBX3	74	98.020	ENSCPBG00000014147	YBX3	74	98.020	Chrysemys_picta_bellii
ENSTGUG00000012047	YBX3	75	97.143	ENSCANG00000036801	YBX3	87	97.143	Colobus_angolensis_palliatus
ENSTGUG00000012047	YBX3	75	97.143	ENSCGRG00001016148	Ybx3	72	97.143	Cricetulus_griseus_chok1gshd
ENSTGUG00000012047	YBX3	100	64.828	ENSCGRG00000004563	Ybx3	97	65.517	Cricetulus_griseus_crigri
ENSTGUG00000012047	YBX3	100	67.133	ENSDORG00000009103	Ybx3	80	67.832	Dipodomys_ordii
ENSTGUG00000012047	YBX3	99	57.840	ENSETEG00000002557	YBX3	99	56.842	Echinops_telfairi
ENSTGUG00000012047	YBX3	100	64.211	ENSEASG00005014726	YBX3	67	87.654	Equus_asinus_asinus
ENSTGUG00000012047	YBX3	100	64.211	ENSECAG00000013777	YBX3	70	88.462	Equus_caballus
ENSTGUG00000012047	YBX3	74	98.077	ENSFCAG00000027748	YBX3	70	98.077	Felis_catus
ENSTGUG00000012047	YBX3	100	72.903	ENSFALG00000003661	YBX3	100	72.903	Ficedula_albicollis
ENSTGUG00000012047	YBX3	100	64.685	ENSFDAG00000021192	YBX3	91	65.385	Fukomys_damarensis
ENSTGUG00000012047	YBX3	75	100.000	ENSGALG00000031890	YBX3	74	100.000	Gallus_gallus
ENSTGUG00000012047	YBX3	75	98.077	ENSGAGG00000017780	YBX3	74	98.077	Gopherus_agassizii
ENSTGUG00000012047	YBX3	74	98.077	ENSGGOG00000001352	YBX3	70	98.077	Gorilla_gorilla
ENSTGUG00000012047	YBX3	100	60.563	ENSHGLG00000014798	-	84	60.000	Heterocephalus_glaber_female
ENSTGUG00000012047	YBX3	93	59.623	ENSHGLG00000015495	-	77	57.414	Heterocephalus_glaber_female
ENSTGUG00000012047	YBX3	75	98.095	ENSHGLG00100003589	YBX3	85	98.095	Heterocephalus_glaber_male
ENSTGUG00000012047	YBX3	100	63.732	ENSSTOG00000032577	-	80	63.028	Ictidomys_tridecemlineatus
ENSTGUG00000012047	YBX3	100	61.268	ENSSTOG00000002108	-	88	61.268	Ictidomys_tridecemlineatus
ENSTGUG00000012047	YBX3	100	48.951	ENSJJAG00000014239	Ybx3	90	84.615	Jaculus_jaculus
ENSTGUG00000012047	YBX3	100	67.133	ENSLAFG00000017247	YBX3	83	63.251	Loxodonta_africana
ENSTGUG00000012047	YBX3	74	98.077	ENSMFAG00000039369	YBX3	70	98.077	Macaca_fascicularis
ENSTGUG00000012047	YBX3	74	98.077	ENSMNEG00000045109	YBX3	70	98.077	Macaca_nemestrina
ENSTGUG00000012047	YBX3	75	97.143	ENSMLEG00000033618	YBX3	75	97.143	Mandrillus_leucophaeus
ENSTGUG00000012047	YBX3	75	100.000	ENSMGAG00000014224	YBX3	99	100.000	Meleagris_gallopavo
ENSTGUG00000012047	YBX3	75	97.143	ENSMAUG00000012185	Ybx3	84	97.143	Mesocricetus_auratus
ENSTGUG00000012047	YBX3	68	94.231	ENSMICG00000031459	-	54	96.296	Microcebus_murinus
ENSTGUG00000012047	YBX3	75	97.143	ENSMOCG00000016291	Ybx3	89	97.143	Microtus_ochrogaster
ENSTGUG00000012047	YBX3	75	97.143	MGP_CAROLIEiJ_G0028947	Ybx3	72	97.143	Mus_caroli
ENSTGUG00000012047	YBX3	75	97.143	ENSMUSG00000030189	Ybx3	72	97.143	Mus_musculus
ENSTGUG00000012047	YBX3	75	97.143	MGP_PahariEiJ_G0022709	Ybx3	72	97.143	Mus_pahari
ENSTGUG00000012047	YBX3	75	97.143	MGP_SPRETEiJ_G0029994	Ybx3	72	97.143	Mus_spretus
ENSTGUG00000012047	YBX3	99	48.299	ENSMPUG00000011810	YBX3	77	52.041	Mustela_putorius_furo
ENSTGUG00000012047	YBX3	93	64.444	ENSMLUG00000007476	YBX3	100	64.815	Myotis_lucifugus
ENSTGUG00000012047	YBX3	99	63.509	ENSNGAG00000000710	Ybx3	87	89.423	Nannospalax_galili
ENSTGUG00000012047	YBX3	68	87.209	ENSNLEG00000034844	YBX3	66	86.420	Nomascus_leucogenys
ENSTGUG00000012047	YBX3	94	61.194	ENSODEG00000017957	YBX3	84	61.538	Octodon_degus
ENSTGUG00000012047	YBX3	95	64.469	ENSOCUG00000001889	YBX3	81	62.898	Oryctolagus_cuniculus
ENSTGUG00000012047	YBX3	100	65.625	ENSOARG00000020919	YBX3	96	65.398	Ovis_aries
ENSTGUG00000012047	YBX3	74	98.077	ENSPPAG00000039068	YBX3	73	98.077	Pan_paniscus
ENSTGUG00000012047	YBX3	74	98.077	ENSPPRG00000005859	YBX3	70	98.077	Panthera_pardus
ENSTGUG00000012047	YBX3	100	67.719	ENSPTIG00000005322	YBX3	80	68.421	Panthera_tigris_altaica
ENSTGUG00000012047	YBX3	74	98.077	ENSPTRG00000004681	YBX3	70	98.077	Pan_troglodytes
ENSTGUG00000012047	YBX3	74	98.077	ENSPANG00000010280	YBX3	70	98.077	Papio_anubis
ENSTGUG00000012047	YBX3	75	97.115	ENSPSIG00000009247	YBX3	100	97.115	Pelodiscus_sinensis
ENSTGUG00000012047	YBX3	75	97.143	ENSPEMG00000012132	-	85	97.143	Peromyscus_maniculatus_bairdii
ENSTGUG00000012047	YBX3	75	97.143	ENSPEMG00000010391	-	80	97.143	Peromyscus_maniculatus_bairdii
ENSTGUG00000012047	YBX3	91	61.538	ENSPCIG00000029949	YBX3	100	61.538	Phascolarctos_cinereus
ENSTGUG00000012047	YBX3	72	65.217	ENSPCAG00000001397	YBX3	69	65.842	Procavia_capensis
ENSTGUG00000012047	YBX3	100	54.895	ENSPVAG00000006740	YBX3	53	65.672	Pteropus_vampyrus
ENSTGUG00000012047	YBX3	75	97.143	ENSRNOG00000005480	Ybx3	72	97.143	Rattus_norvegicus
ENSTGUG00000012047	YBX3	75	97.143	ENSRBIG00000039208	YBX3	71	97.143	Rhinopithecus_bieti
ENSTGUG00000012047	YBX3	74	98.077	ENSRROG00000029638	YBX3	70	98.077	Rhinopithecus_roxellana
ENSTGUG00000012047	YBX3	75	97.143	ENSSBOG00000030573	YBX3	71	97.143	Saimiri_boliviensis_boliviensis
ENSTGUG00000012047	YBX3	100	63.140	ENSSHAG00000003262	YBX3	98	63.140	Sarcophilus_harrisii
ENSTGUG00000012047	YBX3	74	98.077	ENSSSCG00000000633	YBX3	68	98.077	Sus_scrofa
ENSTGUG00000012047	YBX3	92	63.433	ENSTTRG00000008045	YBX3	100	63.433	Tursiops_truncatus
ENSTGUG00000012047	YBX3	98	63.669	ENSUAMG00000016662	YBX3	100	64.388	Ursus_americanus
ENSTGUG00000012047	YBX3	100	67.719	ENSUMAG00000016118	YBX3	94	68.421	Ursus_maritimus
ENSTGUG00000012047	YBX3	66	100.000	ENSVPAG00000000876	YBX3	68	100.000	Vicugna_pacos
ENSTGUG00000012047	YBX3	98	62.950	ENSVVUG00000004956	YBX3	100	63.669	Vulpes_vulpes
ENSTGUG00000012047	YBX3	69	93.023	ENSXETG00000016239	ybx3	78	92.593	Xenopus_tropicalis