EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000012104 (Gene tree)
Gene ID: 100220552
Gene Symbol: RNASEH2B
Alias: AGS2|DLEU8|FLJ11712
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 27266 bases
Position: chr1:55414502-55441767
Accession: 25671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000012470	RNase_H2-Ydr279	PF09468.10	2.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000012609	RNASEH2B-201	1106	-	ENSTGUP00000012470	271 (aa)	-	H0ZPE0

Gene Model

Click here to download ENSTGUG00000012104's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000012104's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000012104	RNASEH2B	99	63.197	ENSG00000136104	RNASEH2B	94	67.059	Homo_sapiens
ENSTGUG00000012104	RNASEH2B	99	64.338	ENSAPOG00000010496	rnaseh2b	88	64.338	Acanthochromis_polyacanthus
ENSTGUG00000012104	RNASEH2B	99	61.765	ENSAMEG00000012040	RNASEH2B	92	61.765	Ailuropoda_melanoleuca
ENSTGUG00000012104	RNASEH2B	96	57.471	ENSACIG00000021991	rnaseh2b	97	56.000	Amphilophus_citrinellus
ENSTGUG00000012104	RNASEH2B	99	63.971	ENSAOCG00000013398	rnaseh2b	88	63.971	Amphiprion_ocellaris
ENSTGUG00000012104	RNASEH2B	99	63.971	ENSAPEG00000006033	rnaseh2b	88	63.971	Amphiprion_percula
ENSTGUG00000012104	RNASEH2B	99	63.603	ENSATEG00000008370	rnaseh2b	88	63.603	Anabas_testudineus
ENSTGUG00000012104	RNASEH2B	100	90.406	ENSAPLG00000008955	RNASEH2B	100	90.406	Anas_platyrhynchos
ENSTGUG00000012104	RNASEH2B	99	68.015	ENSACAG00000011679	RNASEH2B	92	68.015	Anolis_carolinensis
ENSTGUG00000012104	RNASEH2B	99	62.454	ENSANAG00000020662	RNASEH2B	87	62.454	Aotus_nancymaae
ENSTGUG00000012104	RNASEH2B	100	61.905	ENSACLG00000000467	rnaseh2b	89	61.905	Astatotilapia_calliptera
ENSTGUG00000012104	RNASEH2B	99	63.100	ENSAMXG00000014351	rnaseh2b	88	63.100	Astyanax_mexicanus
ENSTGUG00000012104	RNASEH2B	98	60.967	ENSBTAG00000020149	RNASEH2B	87	60.967	Bos_taurus
ENSTGUG00000012104	RNASEH2B	78	57.746	ENSCJAG00000003822	-	79	57.746	Callithrix_jacchus
ENSTGUG00000012104	RNASEH2B	98	62.172	ENSCJAG00000008585	-	88	62.172	Callithrix_jacchus
ENSTGUG00000012104	RNASEH2B	99	61.710	ENSCAFG00000004295	RNASEH2B	88	60.595	Canis_familiaris
ENSTGUG00000012104	RNASEH2B	99	61.710	ENSCAFG00020000250	RNASEH2B	88	61.710	Canis_lupus_dingo
ENSTGUG00000012104	RNASEH2B	85	54.701	ENSCHIG00000012982	-	82	54.701	Capra_hircus
ENSTGUG00000012104	RNASEH2B	98	59.551	ENSCHIG00000018220	RNASEH2B	87	59.551	Capra_hircus
ENSTGUG00000012104	RNASEH2B	99	61.710	ENSTSYG00000009176	-	87	61.710	Carlito_syrichta
ENSTGUG00000012104	RNASEH2B	98	52.809	ENSTSYG00000031177	-	87	52.809	Carlito_syrichta
ENSTGUG00000012104	RNASEH2B	99	52.788	ENSCAPG00000009978	RNASEH2B	91	53.676	Cavia_aperea
ENSTGUG00000012104	RNASEH2B	99	58.889	ENSCPOG00000032527	RNASEH2B	87	58.889	Cavia_porcellus
ENSTGUG00000012104	RNASEH2B	99	62.825	ENSCCAG00000026979	RNASEH2B	88	62.921	Cebus_capucinus
ENSTGUG00000012104	RNASEH2B	96	62.835	ENSCATG00000031336	RNASEH2B	74	62.835	Cercocebus_atys
ENSTGUG00000012104	RNASEH2B	99	60.967	ENSCLAG00000003517	RNASEH2B	74	60.967	Chinchilla_lanigera
ENSTGUG00000012104	RNASEH2B	97	62.172	ENSCSAG00000017701	RNASEH2B	81	62.172	Chlorocebus_sabaeus
ENSTGUG00000012104	RNASEH2B	100	51.825	ENSCHOG00000013688	RNASEH2B	89	51.825	Choloepus_hoffmanni
ENSTGUG00000012104	RNASEH2B	100	76.103	ENSCPBG00000008684	RNASEH2B	90	73.307	Chrysemys_picta_bellii
ENSTGUG00000012104	RNASEH2B	97	39.286	ENSCING00000016454	-	88	39.286	Ciona_intestinalis
ENSTGUG00000012104	RNASEH2B	99	62.500	ENSCANG00000041511	-	87	62.500	Colobus_angolensis_palliatus
ENSTGUG00000012104	RNASEH2B	99	61.624	ENSCGRG00001000611	Rnaseh2b	88	61.624	Cricetulus_griseus_chok1gshd
ENSTGUG00000012104	RNASEH2B	99	61.624	ENSCGRG00000006077	Rnaseh2b	88	61.624	Cricetulus_griseus_crigri
ENSTGUG00000012104	RNASEH2B	99	63.197	ENSCSEG00000004910	rnaseh2b	91	62.548	Cynoglossus_semilaevis
ENSTGUG00000012104	RNASEH2B	99	62.132	ENSCVAG00000005212	rnaseh2b	88	62.132	Cyprinodon_variegatus
ENSTGUG00000012104	RNASEH2B	99	61.255	ENSDARG00000005128	rnaseh2b	88	61.255	Danio_rerio
ENSTGUG00000012104	RNASEH2B	98	54.682	ENSDNOG00000034290	-	87	54.682	Dasypus_novemcinctus
ENSTGUG00000012104	RNASEH2B	99	57.621	ENSDNOG00000049666	-	87	57.621	Dasypus_novemcinctus
ENSTGUG00000012104	RNASEH2B	99	61.940	ENSDORG00000010708	Rnaseh2b	87	61.940	Dipodomys_ordii
ENSTGUG00000012104	RNASEH2B	94	38.996	ENSEBUG00000005965	rnaseh2b	98	40.154	Eptatretus_burgeri
ENSTGUG00000012104	RNASEH2B	99	62.082	ENSEASG00005017323	RNASEH2B	87	62.082	Equus_asinus_asinus
ENSTGUG00000012104	RNASEH2B	99	61.710	ENSECAG00000014262	RNASEH2B	87	61.710	Equus_caballus
ENSTGUG00000012104	RNASEH2B	99	61.765	ENSELUG00000019560	rnaseh2b	88	61.765	Esox_lucius
ENSTGUG00000012104	RNASEH2B	96	61.686	ENSFCAG00000014257	RNASEH2B	82	61.686	Felis_catus
ENSTGUG00000012104	RNASEH2B	100	96.324	ENSFALG00000008435	RNASEH2B	93	96.324	Ficedula_albicollis
ENSTGUG00000012104	RNASEH2B	99	59.108	ENSFDAG00000009920	RNASEH2B	93	59.108	Fukomys_damarensis
ENSTGUG00000012104	RNASEH2B	99	61.765	ENSFHEG00000012160	rnaseh2b	88	61.765	Fundulus_heteroclitus
ENSTGUG00000012104	RNASEH2B	96	60.902	ENSGMOG00000016830	rnaseh2b	92	60.902	Gadus_morhua
ENSTGUG00000012104	RNASEH2B	100	86.397	ENSGALG00000017015	RNASEH2B	89	86.397	Gallus_gallus
ENSTGUG00000012104	RNASEH2B	99	61.029	ENSGAFG00000021222	rnaseh2b	88	61.029	Gambusia_affinis
ENSTGUG00000012104	RNASEH2B	99	61.372	ENSGACG00000002821	rnaseh2b	88	61.372	Gasterosteus_aculeatus
ENSTGUG00000012104	RNASEH2B	100	76.471	ENSGAGG00000014722	RNASEH2B	97	76.471	Gopherus_agassizii
ENSTGUG00000012104	RNASEH2B	99	62.868	ENSGGOG00000001044	RNASEH2B	87	62.868	Gorilla_gorilla
ENSTGUG00000012104	RNASEH2B	100	62.271	ENSHBUG00000006049	rnaseh2b	90	62.452	Haplochromis_burtoni
ENSTGUG00000012104	RNASEH2B	99	60.967	ENSHGLG00100015953	RNASEH2B	91	60.967	Heterocephalus_glaber_male
ENSTGUG00000012104	RNASEH2B	99	57.875	ENSHCOG00000003318	rnaseh2b	92	59.770	Hippocampus_comes
ENSTGUG00000012104	RNASEH2B	99	62.825	ENSIPUG00000023815	rnaseh2b	87	62.825	Ictalurus_punctatus
ENSTGUG00000012104	RNASEH2B	98	61.798	ENSSTOG00000015126	RNASEH2B	91	61.798	Ictidomys_tridecemlineatus
ENSTGUG00000012104	RNASEH2B	99	61.993	ENSJJAG00000013335	Rnaseh2b	91	61.993	Jaculus_jaculus
ENSTGUG00000012104	RNASEH2B	99	63.235	ENSKMAG00000002198	rnaseh2b	88	63.235	Kryptolebias_marmoratus
ENSTGUG00000012104	RNASEH2B	99	66.171	ENSLBEG00000019331	rnaseh2b	87	66.171	Labrus_bergylta
ENSTGUG00000012104	RNASEH2B	83	62.996	ENSLACG00000010782	RNASEH2B	91	62.996	Latimeria_chalumnae
ENSTGUG00000012104	RNASEH2B	100	64.835	ENSLOCG00000009296	rnaseh2b	88	64.835	Lepisosteus_oculatus
ENSTGUG00000012104	RNASEH2B	99	60.741	ENSLAFG00000030158	RNASEH2B	87	60.741	Loxodonta_africana
ENSTGUG00000012104	RNASEH2B	99	62.362	ENSMFAG00000038464	-	87	62.362	Macaca_fascicularis
ENSTGUG00000012104	RNASEH2B	99	57.353	ENSMMUG00000021746	RNASEH2B	86	57.353	Macaca_mulatta
ENSTGUG00000012104	RNASEH2B	99	62.362	ENSMNEG00000030580	RNASEH2B	87	62.362	Macaca_nemestrina
ENSTGUG00000012104	RNASEH2B	99	61.679	ENSMLEG00000043911	-	88	61.679	Mandrillus_leucophaeus
ENSTGUG00000012104	RNASEH2B	99	64.338	ENSMAMG00000017109	rnaseh2b	88	64.338	Mastacembelus_armatus
ENSTGUG00000012104	RNASEH2B	98	61.423	ENSMZEG00005021926	rnaseh2b	87	61.423	Maylandia_zebra
ENSTGUG00000012104	RNASEH2B	100	86.081	ENSMGAG00000015025	RNASEH2B	95	86.081	Meleagris_gallopavo
ENSTGUG00000012104	RNASEH2B	99	61.624	ENSMAUG00000016520	Rnaseh2b	88	61.624	Mesocricetus_auratus
ENSTGUG00000012104	RNASEH2B	99	60.595	ENSMICG00000000528	RNASEH2B	87	60.595	Microcebus_murinus
ENSTGUG00000012104	RNASEH2B	99	62.868	ENSMMOG00000019799	rnaseh2b	94	62.868	Mola_mola
ENSTGUG00000012104	RNASEH2B	100	70.956	ENSMODG00000010775	RNASEH2B	89	70.956	Monodelphis_domestica
ENSTGUG00000012104	RNASEH2B	99	63.971	ENSMALG00000004463	rnaseh2b	89	63.971	Monopterus_albus
ENSTGUG00000012104	RNASEH2B	82	64.126	MGP_CAROLIEiJ_G0019389	Rnaseh2b	82	64.126	Mus_caroli
ENSTGUG00000012104	RNASEH2B	99	61.255	ENSMUSG00000021932	Rnaseh2b	88	61.255	Mus_musculus
ENSTGUG00000012104	RNASEH2B	99	50.804	MGP_PahariEiJ_G0030407	-	90	50.804	Mus_pahari
ENSTGUG00000012104	RNASEH2B	77	59.048	ENSMPUG00000018010	RNASEH2B	88	59.048	Mustela_putorius_furo
ENSTGUG00000012104	RNASEH2B	99	63.941	ENSMLUG00000004065	-	87	63.941	Myotis_lucifugus
ENSTGUG00000012104	RNASEH2B	100	62.271	ENSNBRG00000003253	rnaseh2b	89	62.271	Neolamprologus_brichardi
ENSTGUG00000012104	RNASEH2B	99	62.132	ENSNLEG00000003804	RNASEH2B	87	62.132	Nomascus_leucogenys
ENSTGUG00000012104	RNASEH2B	99	68.750	ENSMEUG00000003665	RNASEH2B	93	68.750	Notamacropus_eugenii
ENSTGUG00000012104	RNASEH2B	59	60.870	ENSOPRG00000003695	-	79	47.200	Ochotona_princeps
ENSTGUG00000012104	RNASEH2B	99	61.338	ENSODEG00000006793	-	87	61.338	Octodon_degus
ENSTGUG00000012104	RNASEH2B	80	54.378	ENSODEG00000005412	-	90	54.378	Octodon_degus
ENSTGUG00000012104	RNASEH2B	100	62.271	ENSONIG00000006657	rnaseh2b	89	62.271	Oreochromis_niloticus
ENSTGUG00000012104	RNASEH2B	100	68.592	ENSOANG00000015537	RNASEH2B	96	68.592	Ornithorhynchus_anatinus
ENSTGUG00000012104	RNASEH2B	100	60.662	ENSOCUG00000008904	RNASEH2B	85	60.662	Oryctolagus_cuniculus
ENSTGUG00000012104	RNASEH2B	99	62.963	ENSORLG00000011850	rnaseh2b	89	62.963	Oryzias_latipes
ENSTGUG00000012104	RNASEH2B	99	63.333	ENSORLG00020012081	rnaseh2b	89	63.333	Oryzias_latipes_hni
ENSTGUG00000012104	RNASEH2B	99	62.963	ENSORLG00015015468	rnaseh2b	89	62.963	Oryzias_latipes_hsok
ENSTGUG00000012104	RNASEH2B	99	63.197	ENSOMEG00000012441	rnaseh2b	88	63.197	Oryzias_melastigma
ENSTGUG00000012104	RNASEH2B	99	61.397	ENSOGAG00000016486	RNASEH2B	91	61.397	Otolemur_garnettii
ENSTGUG00000012104	RNASEH2B	98	59.551	ENSOARG00000008701	RNASEH2B	90	59.551	Ovis_aries
ENSTGUG00000012104	RNASEH2B	99	62.132	ENSPPAG00000026374	RNASEH2B	93	59.155	Pan_paniscus
ENSTGUG00000012104	RNASEH2B	99	60.440	ENSPPRG00000012450	RNASEH2B	89	60.440	Panthera_pardus
ENSTGUG00000012104	RNASEH2B	99	60.806	ENSPTIG00000013918	RNASEH2B	97	60.806	Panthera_tigris_altaica
ENSTGUG00000012104	RNASEH2B	99	62.500	ENSPTRG00000005886	RNASEH2B	95	63.600	Pan_troglodytes
ENSTGUG00000012104	RNASEH2B	99	61.679	ENSPANG00000022424	-	88	61.679	Papio_anubis
ENSTGUG00000012104	RNASEH2B	99	58.303	ENSPKIG00000013386	rnaseh2b	88	58.303	Paramormyrops_kingsleyae
ENSTGUG00000012104	RNASEH2B	62	75.000	ENSPSIG00000002224	RNASEH2B	78	75.000	Pelodiscus_sinensis
ENSTGUG00000012104	RNASEH2B	72	62.245	ENSPMGG00000010299	rnaseh2b	95	62.245	Periophthalmus_magnuspinnatus
ENSTGUG00000012104	RNASEH2B	99	62.731	ENSPEMG00000019721	Rnaseh2b	88	62.731	Peromyscus_maniculatus_bairdii
ENSTGUG00000012104	RNASEH2B	88	67.500	ENSPCIG00000014535	-	81	67.500	Phascolarctos_cinereus
ENSTGUG00000012104	RNASEH2B	99	62.044	ENSPFOG00000016722	rnaseh2b	88	62.044	Poecilia_formosa
ENSTGUG00000012104	RNASEH2B	99	62.500	ENSPLAG00000011755	rnaseh2b	88	62.500	Poecilia_latipinna
ENSTGUG00000012104	RNASEH2B	99	62.500	ENSPMEG00000002721	rnaseh2b	88	62.500	Poecilia_mexicana
ENSTGUG00000012104	RNASEH2B	99	62.132	ENSPREG00000007737	rnaseh2b	88	62.132	Poecilia_reticulata
ENSTGUG00000012104	RNASEH2B	99	62.500	ENSPPYG00000005378	RNASEH2B	87	62.500	Pongo_abelii
ENSTGUG00000012104	RNASEH2B	99	61.111	ENSPCOG00000026623	RNASEH2B	87	61.111	Propithecus_coquereli
ENSTGUG00000012104	RNASEH2B	87	62.083	ENSPVAG00000000508	RNASEH2B	90	62.083	Pteropus_vampyrus
ENSTGUG00000012104	RNASEH2B	100	62.271	ENSPNYG00000013552	rnaseh2b	90	62.452	Pundamilia_nyererei
ENSTGUG00000012104	RNASEH2B	99	59.926	ENSPNAG00000024825	rnaseh2b	88	59.926	Pygocentrus_nattereri
ENSTGUG00000012104	RNASEH2B	99	60.517	ENSRNOG00000009192	Rnaseh2b	88	60.517	Rattus_norvegicus
ENSTGUG00000012104	RNASEH2B	97	55.303	ENSRBIG00000036017	-	86	55.303	Rhinopithecus_bieti
ENSTGUG00000012104	RNASEH2B	99	62.082	ENSRBIG00000028928	-	87	62.082	Rhinopithecus_bieti
ENSTGUG00000012104	RNASEH2B	79	49.065	ENSRROG00000044915	-	81	50.235	Rhinopithecus_roxellana
ENSTGUG00000012104	RNASEH2B	99	62.082	ENSRROG00000018808	-	87	62.082	Rhinopithecus_roxellana
ENSTGUG00000012104	RNASEH2B	99	62.454	ENSSBOG00000008081	RNASEH2B	96	62.454	Saimiri_boliviensis_boliviensis
ENSTGUG00000012104	RNASEH2B	100	69.118	ENSSHAG00000016190	RNASEH2B	89	69.118	Sarcophilus_harrisii
ENSTGUG00000012104	RNASEH2B	100	61.905	ENSSFOG00015010190	rnaseh2b	89	61.905	Scleropages_formosus
ENSTGUG00000012104	RNASEH2B	99	61.993	ENSSMAG00000001546	rnaseh2b	88	61.993	Scophthalmus_maximus
ENSTGUG00000012104	RNASEH2B	99	65.074	ENSSDUG00000007567	rnaseh2b	88	65.074	Seriola_dumerili
ENSTGUG00000012104	RNASEH2B	99	64.207	ENSSLDG00000012485	rnaseh2b	88	64.207	Seriola_lalandi_dorsalis
ENSTGUG00000012104	RNASEH2B	97	69.318	ENSSPUG00000006745	-	95	69.318	Sphenodon_punctatus
ENSTGUG00000012104	RNASEH2B	99	64.338	ENSSPAG00000020926	rnaseh2b	88	64.338	Stegastes_partitus
ENSTGUG00000012104	RNASEH2B	98	60.674	ENSSSCG00000024385	RNASEH2B	95	61.885	Sus_scrofa
ENSTGUG00000012104	RNASEH2B	99	63.971	ENSTRUG00000015098	rnaseh2b	88	63.971	Takifugu_rubripes
ENSTGUG00000012104	RNASEH2B	99	62.963	ENSTNIG00000013861	rnaseh2b	87	62.963	Tetraodon_nigroviridis
ENSTGUG00000012104	RNASEH2B	98	54.444	ENSTTRG00000010761	RNASEH2B	87	54.444	Tursiops_truncatus
ENSTGUG00000012104	RNASEH2B	99	63.197	ENSUAMG00000022849	RNASEH2B	96	63.197	Ursus_americanus
ENSTGUG00000012104	RNASEH2B	99	62.825	ENSUMAG00000018556	RNASEH2B	96	62.825	Ursus_maritimus
ENSTGUG00000012104	RNASEH2B	98	63.060	ENSVPAG00000005679	RNASEH2B	93	63.060	Vicugna_pacos
ENSTGUG00000012104	RNASEH2B	99	62.082	ENSVVUG00000024015	RNASEH2B	80	62.082	Vulpes_vulpes
ENSTGUG00000012104	RNASEH2B	100	66.667	ENSXETG00000020720	rnaseh2b	89	66.667	Xenopus_tropicalis
ENSTGUG00000012104	RNASEH2B	99	61.255	ENSXCOG00000018732	rnaseh2b	90	60.674	Xiphophorus_couchianus
ENSTGUG00000012104	RNASEH2B	99	62.132	ENSXMAG00000022554	rnaseh2b	88	62.132	Xiphophorus_maculatus