EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000012337 (Gene tree)
Gene ID: 100218191
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 4331 bases
Position: chr5:39670364-39674694
Accession: 100218191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000012702	RRM_1	PF00076.22	2.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000012844	SLIRP-201	730	-	ENSTGUP00000012702	106 (aa)	XP_002200577	H0ZQ18

Gene Model

Click here to download ENSTGUG00000012337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000012337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000012337	SLIRP	75	34.722	ENSTGUG00000001168	HNRNPAB	53	39.394
ENSTGUG00000012337	SLIRP	68	33.333	ENSTGUG00000002850	HNRNPDL	51	34.848
ENSTGUG00000012337	SLIRP	66	32.857	ENSTGUG00000014159	-	50	36.207

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000012337	SLIRP	81	48.837	ENSG00000119705	SLIRP	92	54.286	Homo_sapiens
ENSTGUG00000012337	SLIRP	83	51.136	ENSAPOG00000001298	slirp	78	55.128	Acanthochromis_polyacanthus
ENSTGUG00000012337	SLIRP	83	52.222	ENSAMEG00000003975	SLIRP	77	52.857	Ailuropoda_melanoleuca
ENSTGUG00000012337	SLIRP	87	55.435	ENSACIG00000023083	slirp	77	61.538	Amphilophus_citrinellus
ENSTGUG00000012337	SLIRP	88	53.763	ENSAOCG00000006342	slirp	79	57.692	Amphiprion_ocellaris
ENSTGUG00000012337	SLIRP	88	53.763	ENSAPEG00000015719	-	80	57.692	Amphiprion_percula
ENSTGUG00000012337	SLIRP	88	53.763	ENSAPEG00000015917	slirp	79	57.692	Amphiprion_percula
ENSTGUG00000012337	SLIRP	78	57.831	ENSATEG00000013525	slirp	78	58.974	Anabas_testudineus
ENSTGUG00000012337	SLIRP	77	46.341	ENSAMXG00000018693	slirp	76	48.684	Astyanax_mexicanus
ENSTGUG00000012337	SLIRP	88	50.000	ENSCJAG00000016946	SLIRP	72	53.731	Callithrix_jacchus
ENSTGUG00000012337	SLIRP	84	47.253	ENSCAFG00020015876	-	64	52.113	Canis_lupus_dingo
ENSTGUG00000012337	SLIRP	88	50.000	ENSCCAG00000030130	SLIRP	66	53.521	Cebus_capucinus
ENSTGUG00000012337	SLIRP	86	52.128	ENSCATG00000036327	SLIRP	72	58.209	Cercocebus_atys
ENSTGUG00000012337	SLIRP	69	56.164	ENSCSAG00000011736	SLIRP	73	53.750	Chlorocebus_sabaeus
ENSTGUG00000012337	SLIRP	75	56.962	ENSCPBG00000026327	SLIRP	78	57.143	Chrysemys_picta_bellii
ENSTGUG00000012337	SLIRP	63	56.716	ENSCANG00000032892	SLIRP	71	53.947	Colobus_angolensis_palliatus
ENSTGUG00000012337	SLIRP	86	47.826	ENSCGRG00001024068	Slirp	64	53.521	Cricetulus_griseus_chok1gshd
ENSTGUG00000012337	SLIRP	86	47.826	ENSCGRG00000017440	Slirp	64	53.521	Cricetulus_griseus_crigri
ENSTGUG00000012337	SLIRP	76	51.852	ENSCSEG00000015766	slirp	79	52.564	Cynoglossus_semilaevis
ENSTGUG00000012337	SLIRP	71	58.667	ENSCVAG00000012504	slirp	74	58.667	Cyprinodon_variegatus
ENSTGUG00000012337	SLIRP	88	52.688	ENSDARG00000097753	slirp	76	60.256	Danio_rerio
ENSTGUG00000012337	SLIRP	67	53.521	ENSDNOG00000007721	SLIRP	65	53.521	Dasypus_novemcinctus
ENSTGUG00000012337	SLIRP	98	45.283	ENSDORG00000012379	Slirp	77	47.674	Dipodomys_ordii
ENSTGUG00000012337	SLIRP	75	58.750	ENSETEG00000010345	SLIRP	66	59.155	Echinops_telfairi
ENSTGUG00000012337	SLIRP	86	53.763	ENSEASG00005020193	SLIRP	64	56.338	Equus_asinus_asinus
ENSTGUG00000012337	SLIRP	76	50.617	ENSEEUG00000007257	SLIRP	69	54.286	Erinaceus_europaeus
ENSTGUG00000012337	SLIRP	88	52.688	ENSELUG00000016800	slirp	77	56.410	Esox_lucius
ENSTGUG00000012337	SLIRP	88	49.474	ENSFCAG00000036326	SLIRP	68	55.224	Felis_catus
ENSTGUG00000012337	SLIRP	88	89.247	ENSFALG00000012583	SLIRP	88	89.247	Ficedula_albicollis
ENSTGUG00000012337	SLIRP	86	47.253	ENSFDAG00000008347	SLIRP	63	50.704	Fukomys_damarensis
ENSTGUG00000012337	SLIRP	70	50.000	ENSFHEG00000004709	slirp	65	58.333	Fundulus_heteroclitus
ENSTGUG00000012337	SLIRP	92	44.330	ENSGMOG00000016948	slirp	74	48.052	Gadus_morhua
ENSTGUG00000012337	SLIRP	92	77.778	ENSGALG00000031238	SLIRP	78	89.189	Gallus_gallus
ENSTGUG00000012337	SLIRP	87	52.174	ENSGAFG00000010998	slirp	78	58.974	Gambusia_affinis
ENSTGUG00000012337	SLIRP	74	52.564	ENSGACG00000020137	slirp	91	52.564	Gasterosteus_aculeatus
ENSTGUG00000012337	SLIRP	97	52.830	ENSGAGG00000009953	SLIRP	54	57.692	Gopherus_agassizii
ENSTGUG00000012337	SLIRP	81	48.837	ENSGGOG00000011059	-	72	55.224	Gorilla_gorilla
ENSTGUG00000012337	SLIRP	69	47.945	ENSHGLG00000018491	SLIRP	64	47.887	Heterocephalus_glaber_female
ENSTGUG00000012337	SLIRP	69	47.945	ENSHGLG00100014153	SLIRP	64	47.887	Heterocephalus_glaber_male
ENSTGUG00000012337	SLIRP	88	53.763	ENSHCOG00000006795	slirp	79	61.538	Hippocampus_comes
ENSTGUG00000012337	SLIRP	88	55.914	ENSIPUG00000010214	SLIRP	78	58.974	Ictalurus_punctatus
ENSTGUG00000012337	SLIRP	81	47.674	ENSSTOG00000034316	SLIRP	77	47.674	Ictidomys_tridecemlineatus
ENSTGUG00000012337	SLIRP	77	53.659	ENSKMAG00000002038	slirp	75	55.128	Kryptolebias_marmoratus
ENSTGUG00000012337	SLIRP	89	50.000	ENSLBEG00000007564	slirp	78	53.846	Labrus_bergylta
ENSTGUG00000012337	SLIRP	88	55.914	ENSLACG00000013434	SLIRP	75	60.256	Latimeria_chalumnae
ENSTGUG00000012337	SLIRP	78	51.807	ENSMFAG00000042960	SLIRP	72	58.209	Macaca_fascicularis
ENSTGUG00000012337	SLIRP	66	58.571	ENSMMUG00000029256	SLIRP	72	58.209	Macaca_mulatta
ENSTGUG00000012337	SLIRP	78	51.807	ENSMNEG00000028921	SLIRP	72	58.209	Macaca_nemestrina
ENSTGUG00000012337	SLIRP	80	53.409	ENSMLEG00000043644	SLIRP	71	55.263	Mandrillus_leucophaeus
ENSTGUG00000012337	SLIRP	83	54.545	ENSMZEG00005004617	slirp	79	58.974	Maylandia_zebra
ENSTGUG00000012337	SLIRP	99	46.226	ENSMAUG00000003857	Slirp	77	47.674	Mesocricetus_auratus
ENSTGUG00000012337	SLIRP	87	46.739	ENSMICG00000012080	SLIRP	64	52.941	Microcebus_murinus
ENSTGUG00000012337	SLIRP	88	50.000	ENSMOCG00000016019	Slirp	77	47.674	Microtus_ochrogaster
ENSTGUG00000012337	SLIRP	86	53.846	ENSMMOG00000018268	slirp	78	57.692	Mola_mola
ENSTGUG00000012337	SLIRP	65	49.275	ENSMODG00000005207	-	97	49.275	Monodelphis_domestica
ENSTGUG00000012337	SLIRP	80	55.294	ENSMALG00000012581	slirp	80	57.692	Monopterus_albus
ENSTGUG00000012337	SLIRP	86	49.462	MGP_CAROLIEiJ_G0017995	Slirp	80	47.674	Mus_caroli
ENSTGUG00000012337	SLIRP	86	49.462	ENSMUSG00000021040	Slirp	77	47.674	Mus_musculus
ENSTGUG00000012337	SLIRP	86	49.462	MGP_SPRETEiJ_G0018840	Slirp	77	47.674	Mus_spretus
ENSTGUG00000012337	SLIRP	69	53.425	ENSMLUG00000029544	-	64	53.521	Myotis_lucifugus
ENSTGUG00000012337	SLIRP	68	51.389	ENSMLUG00000024998	-	63	51.429	Myotis_lucifugus
ENSTGUG00000012337	SLIRP	86	47.253	ENSNGAG00000016363	Slirp	67	51.429	Nannospalax_galili
ENSTGUG00000012337	SLIRP	86	53.763	ENSNLEG00000032459	-	73	57.353	Nomascus_leucogenys
ENSTGUG00000012337	SLIRP	82	51.724	ENSNLEG00000027238	-	79	57.971	Nomascus_leucogenys
ENSTGUG00000012337	SLIRP	80	49.412	ENSODEG00000012580	SLIRP	76	54.286	Octodon_degus
ENSTGUG00000012337	SLIRP	83	54.545	ENSONIG00000011692	slirp	79	58.974	Oreochromis_niloticus
ENSTGUG00000012337	SLIRP	92	50.505	ENSOANG00000022366	SLIRP	65	55.556	Ornithorhynchus_anatinus
ENSTGUG00000012337	SLIRP	87	51.087	ENSORLG00000010761	slirp	60	57.692	Oryzias_latipes
ENSTGUG00000012337	SLIRP	85	53.333	ENSORLG00020022188	slirp	78	58.974	Oryzias_latipes_hni
ENSTGUG00000012337	SLIRP	91	50.000	ENSORLG00015020171	slirp	77	57.692	Oryzias_latipes_hsok
ENSTGUG00000012337	SLIRP	87	52.174	ENSOMEG00000019321	slirp	78	57.692	Oryzias_melastigma
ENSTGUG00000012337	SLIRP	66	54.286	ENSPPAG00000040710	-	72	55.224	Pan_paniscus
ENSTGUG00000012337	SLIRP	88	49.474	ENSPPRG00000014350	SLIRP	68	55.224	Panthera_pardus
ENSTGUG00000012337	SLIRP	88	49.474	ENSPTIG00000014196	SLIRP	68	55.224	Panthera_tigris_altaica
ENSTGUG00000012337	SLIRP	81	48.837	ENSPTRG00000030691	SLIRP	72	55.224	Pan_troglodytes
ENSTGUG00000012337	SLIRP	92	49.000	ENSPANG00000026323	SLIRP	72	58.209	Papio_anubis
ENSTGUG00000012337	SLIRP	63	51.429	ENSPKIG00000008831	slirp	59	55.000	Paramormyrops_kingsleyae
ENSTGUG00000012337	SLIRP	71	60.000	ENSPMGG00000010541	slirp	86	60.000	Periophthalmus_magnuspinnatus
ENSTGUG00000012337	SLIRP	72	48.684	ENSPEMG00000013234	Slirp	69	48.571	Peromyscus_maniculatus_bairdii
ENSTGUG00000012337	SLIRP	60	50.000	ENSPMAG00000009355	slirp	84	44.737	Petromyzon_marinus
ENSTGUG00000012337	SLIRP	83	47.727	ENSPCIG00000026842	-	80	51.351	Phascolarctos_cinereus
ENSTGUG00000012337	SLIRP	87	51.087	ENSPFOG00000006758	slirp	78	57.692	Poecilia_formosa
ENSTGUG00000012337	SLIRP	87	51.087	ENSPLAG00000011140	slirp	78	57.692	Poecilia_latipinna
ENSTGUG00000012337	SLIRP	87	51.087	ENSPMEG00000019535	slirp	78	57.692	Poecilia_mexicana
ENSTGUG00000012337	SLIRP	83	53.409	ENSPREG00000011673	slirp	78	57.692	Poecilia_reticulata
ENSTGUG00000012337	SLIRP	69	57.534	ENSPPYG00000006030	SLIRP	64	58.571	Pongo_abelii
ENSTGUG00000012337	SLIRP	78	45.783	ENSPCOG00000015159	SLIRP	64	51.471	Propithecus_coquereli
ENSTGUG00000012337	SLIRP	88	51.613	ENSPNAG00000008633	slirp	79	58.974	Pygocentrus_nattereri
ENSTGUG00000012337	SLIRP	78	51.807	ENSRBIG00000032222	-	72	58.209	Rhinopithecus_bieti
ENSTGUG00000012337	SLIRP	63	56.716	ENSRBIG00000032998	-	62	56.716	Rhinopithecus_bieti
ENSTGUG00000012337	SLIRP	67	50.704	ENSRBIG00000035817	-	74	48.750	Rhinopithecus_bieti
ENSTGUG00000012337	SLIRP	61	58.462	ENSRBIG00000031396	-	65	58.462	Rhinopithecus_bieti
ENSTGUG00000012337	SLIRP	70	54.054	ENSRROG00000041312	-	79	53.750	Rhinopithecus_roxellana
ENSTGUG00000012337	SLIRP	78	51.807	ENSRROG00000036656	-	72	58.209	Rhinopithecus_roxellana
ENSTGUG00000012337	SLIRP	63	58.209	ENSRROG00000017133	-	70	58.209	Rhinopithecus_roxellana
ENSTGUG00000012337	SLIRP	61	56.923	ENSRROG00000035604	-	65	56.923	Rhinopithecus_roxellana
ENSTGUG00000012337	SLIRP	82	50.000	ENSSBOG00000020014	SLIRP	72	55.224	Saimiri_boliviensis_boliviensis
ENSTGUG00000012337	SLIRP	87	48.421	ENSSFOG00015011165	slirp	78	54.545	Scleropages_formosus
ENSTGUG00000012337	SLIRP	74	46.154	ENSSMAG00000012930	slirp	76	46.154	Scophthalmus_maximus
ENSTGUG00000012337	SLIRP	87	47.826	ENSSDUG00000021883	slirp	51	53.846	Seriola_dumerili
ENSTGUG00000012337	SLIRP	87	47.826	ENSSLDG00000023136	slirp	71	53.846	Seriola_lalandi_dorsalis
ENSTGUG00000012337	SLIRP	90	54.737	ENSSPUG00000009346	SLIRP	79	58.442	Sphenodon_punctatus
ENSTGUG00000012337	SLIRP	88	45.161	ENSSPAG00000013477	slirp	77	49.351	Stegastes_partitus
ENSTGUG00000012337	SLIRP	81	48.837	ENSSSCG00000028167	SLIRP	77	48.837	Sus_scrofa
ENSTGUG00000012337	SLIRP	86	47.826	ENSTRUG00000020127	slirp	78	49.367	Takifugu_rubripes
ENSTGUG00000012337	SLIRP	97	52.381	ENSUAMG00000022445	SLIRP	64	57.746	Ursus_americanus
ENSTGUG00000012337	SLIRP	84	56.044	ENSUMAG00000007166	SLIRP	64	57.746	Ursus_maritimus
ENSTGUG00000012337	SLIRP	84	49.451	ENSVPAG00000001781	SLIRP	66	53.521	Vicugna_pacos
ENSTGUG00000012337	SLIRP	80	47.059	ENSVVUG00000004436	SLIRP	77	44.186	Vulpes_vulpes
ENSTGUG00000012337	SLIRP	73	59.740	ENSXETG00000030343	SLIRP	87	59.740	Xenopus_tropicalis
ENSTGUG00000012337	SLIRP	87	50.000	ENSXCOG00000009422	slirp	78	56.410	Xiphophorus_couchianus
ENSTGUG00000012337	SLIRP	87	51.087	ENSXMAG00000015655	slirp	78	57.692	Xiphophorus_maculatus