EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000012571 (Gene tree)
Gene ID: 100223891
Gene Symbol: -
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 11475 bases
Position: chr5:45450928-45462402
Accession: 100223891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000012947	Beta-Casp	PF10996.8	1.6e-20	1	1
ENSTGUP00000012947	Lactamase_B	PF00753.27	2.2e-06	1	1
ENSTGUP00000012947	RMMBL	PF07521.12	4.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000013095	-	2719	XM_002200557	ENSTGUP00000012947	782 (aa)	XP_002200593	H0ZQQ7

Gene Model

Click here to download ENSTGUG00000012571's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000012571's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000012571	-	100	96.424	ENSG00000165934	CPSF2	100	96.424	Homo_sapiens
ENSTGUG00000012571	-	100	85.406	ENSAPOG00000001242	cpsf2	100	85.406	Acanthochromis_polyacanthus
ENSTGUG00000012571	-	100	85.805	ENSACIG00000009331	cpsf2	100	85.805	Amphilophus_citrinellus
ENSTGUG00000012571	-	100	85.660	ENSAOCG00000014095	cpsf2	100	85.660	Amphiprion_ocellaris
ENSTGUG00000012571	-	100	85.660	ENSAPEG00000009158	cpsf2	100	85.660	Amphiprion_percula
ENSTGUG00000012571	-	96	86.034	ENSATEG00000017644	cpsf2	100	83.946	Anabas_testudineus
ENSTGUG00000012571	-	100	98.852	ENSAPLG00000006330	CPSF2	100	98.852	Anas_platyrhynchos
ENSTGUG00000012571	-	100	96.041	ENSACAG00000009245	CPSF2	100	96.041	Anolis_carolinensis
ENSTGUG00000012571	-	100	96.424	ENSANAG00000022915	CPSF2	100	96.424	Aotus_nancymaae
ENSTGUG00000012571	-	100	85.896	ENSAMXG00000018696	cpsf2	100	85.896	Astyanax_mexicanus
ENSTGUG00000012571	-	100	96.807	ENSBTAG00000010227	CPSF2	100	96.807	Bos_taurus
ENSTGUG00000012571	-	100	40.376	WBGene00017313	cpsf-2	100	40.307	Caenorhabditis_elegans
ENSTGUG00000012571	-	100	96.424	ENSCJAG00000018069	CPSF2	100	96.424	Callithrix_jacchus
ENSTGUG00000012571	-	100	96.424	ENSCAFG00000010909	CPSF2	100	96.424	Canis_familiaris
ENSTGUG00000012571	-	100	96.424	ENSCAFG00020020670	CPSF2	100	96.424	Canis_lupus_dingo
ENSTGUG00000012571	-	100	96.807	ENSCHIG00000023848	CPSF2	100	96.807	Capra_hircus
ENSTGUG00000012571	-	100	95.913	ENSTSYG00000009036	CPSF2	100	95.913	Carlito_syrichta
ENSTGUG00000012571	-	100	96.552	ENSCPOG00000010899	CPSF2	100	96.552	Cavia_porcellus
ENSTGUG00000012571	-	100	96.424	ENSCCAG00000028088	CPSF2	100	96.424	Cebus_capucinus
ENSTGUG00000012571	-	100	96.552	ENSCATG00000030132	CPSF2	100	96.552	Cercocebus_atys
ENSTGUG00000012571	-	100	96.424	ENSCLAG00000012404	CPSF2	100	96.424	Chinchilla_lanigera
ENSTGUG00000012571	-	100	96.552	ENSCSAG00000011300	CPSF2	100	96.552	Chlorocebus_sabaeus
ENSTGUG00000012571	-	100	90.166	ENSCHOG00000012904	CPSF2	100	90.166	Choloepus_hoffmanni
ENSTGUG00000012571	-	100	97.957	ENSCPBG00000008766	CPSF2	97	97.957	Chrysemys_picta_bellii
ENSTGUG00000012571	-	100	54.613	ENSCING00000007881	-	100	54.239	Ciona_intestinalis
ENSTGUG00000012571	-	94	96.453	ENSCANG00000041651	CPSF2	100	96.453	Colobus_angolensis_palliatus
ENSTGUG00000012571	-	100	96.296	ENSCGRG00001006901	Cpsf2	100	96.296	Cricetulus_griseus_chok1gshd
ENSTGUG00000012571	-	100	96.296	ENSCGRG00000012416	Cpsf2	100	96.296	Cricetulus_griseus_crigri
ENSTGUG00000012571	-	100	83.777	ENSCSEG00000004116	cpsf2	100	83.777	Cynoglossus_semilaevis
ENSTGUG00000012571	-	100	85.279	ENSCVAG00000000095	cpsf2	100	85.279	Cyprinodon_variegatus
ENSTGUG00000012571	-	100	85.190	ENSDARG00000028971	cpsf2	100	85.190	Danio_rerio
ENSTGUG00000012571	-	100	96.679	ENSDNOG00000042757	CPSF2	100	96.679	Dasypus_novemcinctus
ENSTGUG00000012571	-	100	96.169	ENSDORG00000013709	Cpsf2	100	96.169	Dipodomys_ordii
ENSTGUG00000012571	-	100	52.993	FBgn0027873	Cpsf100	100	52.750	Drosophila_melanogaster
ENSTGUG00000012571	-	100	87.500	ENSETEG00000012123	CPSF2	100	87.500	Echinops_telfairi
ENSTGUG00000012571	-	52	76.225	ENSEBUG00000012098	cpsf2	93	76.225	Eptatretus_burgeri
ENSTGUG00000012571	-	91	96.587	ENSEASG00005021193	CPSF2	100	96.587	Equus_asinus_asinus
ENSTGUG00000012571	-	100	96.296	ENSECAG00000023935	CPSF2	100	96.296	Equus_caballus
ENSTGUG00000012571	-	100	84.316	ENSELUG00000008442	cpsf2	100	84.316	Esox_lucius
ENSTGUG00000012571	-	100	96.296	ENSFCAG00000007886	CPSF2	100	96.296	Felis_catus
ENSTGUG00000012571	-	100	99.616	ENSFALG00000002412	CPSF2	100	99.616	Ficedula_albicollis
ENSTGUG00000012571	-	100	96.424	ENSFDAG00000006327	CPSF2	100	96.424	Fukomys_damarensis
ENSTGUG00000012571	-	96	84.635	ENSFHEG00000015465	cpsf2	98	85.026	Fundulus_heteroclitus
ENSTGUG00000012571	-	100	83.480	ENSGMOG00000008761	cpsf2	100	83.480	Gadus_morhua
ENSTGUG00000012571	-	100	98.721	ENSGALG00000010783	CPSF2	100	98.721	Gallus_gallus
ENSTGUG00000012571	-	100	85.406	ENSGAFG00000001407	cpsf2	100	85.406	Gambusia_affinis
ENSTGUG00000012571	-	100	84.898	ENSGACG00000008418	cpsf2	100	84.898	Gasterosteus_aculeatus
ENSTGUG00000012571	-	100	97.829	ENSGAGG00000008287	CPSF2	100	97.829	Gopherus_agassizii
ENSTGUG00000012571	-	100	96.424	ENSGGOG00000011799	CPSF2	100	96.424	Gorilla_gorilla
ENSTGUG00000012571	-	100	85.406	ENSHBUG00000023466	cpsf2	100	85.406	Haplochromis_burtoni
ENSTGUG00000012571	-	100	96.296	ENSHGLG00000018311	CPSF2	100	96.296	Heterocephalus_glaber_female
ENSTGUG00000012571	-	100	96.296	ENSHGLG00100016460	CPSF2	100	96.296	Heterocephalus_glaber_male
ENSTGUG00000012571	-	100	84.898	ENSHCOG00000019527	cpsf2	98	84.898	Hippocampus_comes
ENSTGUG00000012571	-	100	85.896	ENSIPUG00000020857	cpsf2	100	85.896	Ictalurus_punctatus
ENSTGUG00000012571	-	100	96.424	ENSSTOG00000009528	CPSF2	100	96.424	Ictidomys_tridecemlineatus
ENSTGUG00000012571	-	100	96.552	ENSJJAG00000017925	Cpsf2	100	96.552	Jaculus_jaculus
ENSTGUG00000012571	-	100	84.772	ENSKMAG00000019429	cpsf2	100	84.772	Kryptolebias_marmoratus
ENSTGUG00000012571	-	95	84.337	ENSLBEG00000011585	cpsf2	100	84.337	Labrus_bergylta
ENSTGUG00000012571	-	100	91.049	ENSLACG00000019024	CPSF2	100	91.049	Latimeria_chalumnae
ENSTGUG00000012571	-	100	88.086	ENSLOCG00000014102	cpsf2	100	88.086	Lepisosteus_oculatus
ENSTGUG00000012571	-	100	96.178	ENSLAFG00000004891	CPSF2	100	96.178	Loxodonta_africana
ENSTGUG00000012571	-	100	96.552	ENSMFAG00000041212	CPSF2	100	96.552	Macaca_fascicularis
ENSTGUG00000012571	-	100	96.552	ENSMMUG00000000699	CPSF2	100	96.552	Macaca_mulatta
ENSTGUG00000012571	-	100	96.552	ENSMNEG00000031584	CPSF2	100	96.552	Macaca_nemestrina
ENSTGUG00000012571	-	100	96.552	ENSMLEG00000029394	CPSF2	100	96.552	Mandrillus_leucophaeus
ENSTGUG00000012571	-	100	85.406	ENSMAMG00000004235	cpsf2	100	85.406	Mastacembelus_armatus
ENSTGUG00000012571	-	100	85.533	ENSMZEG00005001769	cpsf2	100	85.533	Maylandia_zebra
ENSTGUG00000012571	-	100	98.467	ENSMGAG00000013122	CPSF2	100	98.467	Meleagris_gallopavo
ENSTGUG00000012571	-	100	96.296	ENSMAUG00000015160	Cpsf2	100	96.296	Mesocricetus_auratus
ENSTGUG00000012571	-	100	96.679	ENSMICG00000016441	CPSF2	100	96.679	Microcebus_murinus
ENSTGUG00000012571	-	100	96.296	ENSMOCG00000015372	Cpsf2	100	96.296	Microtus_ochrogaster
ENSTGUG00000012571	-	100	81.091	ENSMMOG00000015590	cpsf2	100	81.091	Mola_mola
ENSTGUG00000012571	-	100	97.063	ENSMODG00000002042	CPSF2	100	97.063	Monodelphis_domestica
ENSTGUG00000012571	-	100	82.360	ENSMALG00000022275	cpsf2	100	82.360	Monopterus_albus
ENSTGUG00000012571	-	100	95.658	ENSMUSG00000041781	Cpsf2	100	95.658	Mus_musculus
ENSTGUG00000012571	-	100	95.913	MGP_PahariEiJ_G0029791	Cpsf2	100	95.913	Mus_pahari
ENSTGUG00000012571	-	100	95.658	MGP_SPRETEiJ_G0018877	Cpsf2	100	95.658	Mus_spretus
ENSTGUG00000012571	-	100	96.424	ENSMPUG00000007617	CPSF2	98	96.424	Mustela_putorius_furo
ENSTGUG00000012571	-	100	96.169	ENSMLUG00000005570	CPSF2	100	96.169	Myotis_lucifugus
ENSTGUG00000012571	-	100	96.679	ENSNGAG00000020312	Cpsf2	100	96.679	Nannospalax_galili
ENSTGUG00000012571	-	100	85.678	ENSNBRG00000022402	cpsf2	100	85.678	Neolamprologus_brichardi
ENSTGUG00000012571	-	100	95.530	ENSNLEG00000017132	CPSF2	100	95.530	Nomascus_leucogenys
ENSTGUG00000012571	-	91	99.353	ENSMEUG00000008138	CPSF2	91	99.353	Notamacropus_eugenii
ENSTGUG00000012571	-	94	89.617	ENSOPRG00000008484	-	100	89.617	Ochotona_princeps
ENSTGUG00000012571	-	100	96.424	ENSODEG00000008682	CPSF2	100	96.424	Octodon_degus
ENSTGUG00000012571	-	100	85.914	ENSONIG00000005901	cpsf2	100	85.914	Oreochromis_niloticus
ENSTGUG00000012571	-	100	96.296	ENSOANG00000003822	CPSF2	100	96.296	Ornithorhynchus_anatinus
ENSTGUG00000012571	-	100	96.552	ENSOCUG00000005713	CPSF2	100	96.552	Oryctolagus_cuniculus
ENSTGUG00000012571	-	100	79.822	ENSORLG00000011628	cpsf2	100	79.822	Oryzias_latipes
ENSTGUG00000012571	-	100	84.645	ENSORLG00020016980	cpsf2	100	84.645	Oryzias_latipes_hni
ENSTGUG00000012571	-	100	84.645	ENSORLG00015011910	cpsf2	100	84.645	Oryzias_latipes_hsok
ENSTGUG00000012571	-	100	83.838	ENSOMEG00000022876	cpsf2	100	84.157	Oryzias_melastigma
ENSTGUG00000012571	-	100	93.758	ENSOARG00000012889	CPSF2	100	93.758	Ovis_aries
ENSTGUG00000012571	-	100	96.424	ENSPPAG00000039666	CPSF2	100	96.424	Pan_paniscus
ENSTGUG00000012571	-	99	96.292	ENSPPRG00000010869	CPSF2	100	96.292	Panthera_pardus
ENSTGUG00000012571	-	100	96.296	ENSPTIG00000021202	CPSF2	100	96.296	Panthera_tigris_altaica
ENSTGUG00000012571	-	100	96.424	ENSPTRG00000006651	CPSF2	100	96.424	Pan_troglodytes
ENSTGUG00000012571	-	100	96.552	ENSPANG00000017417	CPSF2	100	96.552	Papio_anubis
ENSTGUG00000012571	-	100	81.321	ENSPKIG00000021453	cpsf2	100	81.321	Paramormyrops_kingsleyae
ENSTGUG00000012571	-	100	97.063	ENSPSIG00000006289	CPSF2	100	97.063	Pelodiscus_sinensis
ENSTGUG00000012571	-	76	79.734	ENSPMGG00000002511	cpsf2	100	79.900	Periophthalmus_magnuspinnatus
ENSTGUG00000012571	-	100	96.424	ENSPEMG00000007917	Cpsf2	100	96.424	Peromyscus_maniculatus_bairdii
ENSTGUG00000012571	-	100	74.083	ENSPMAG00000006205	cpsf2	100	74.083	Petromyzon_marinus
ENSTGUG00000012571	-	100	97.063	ENSPCIG00000011393	CPSF2	100	97.063	Phascolarctos_cinereus
ENSTGUG00000012571	-	100	85.406	ENSPFOG00000018648	cpsf2	100	85.406	Poecilia_formosa
ENSTGUG00000012571	-	100	85.406	ENSPLAG00000019199	cpsf2	99	85.406	Poecilia_latipinna
ENSTGUG00000012571	-	96	85.771	ENSPMEG00000012100	cpsf2	100	85.007	Poecilia_mexicana
ENSTGUG00000012571	-	100	85.406	ENSPREG00000008960	cpsf2	100	85.406	Poecilia_reticulata
ENSTGUG00000012571	-	63	94.970	ENSPPYG00000029685	-	100	94.970	Pongo_abelii
ENSTGUG00000012571	-	100	96.296	ENSPCAG00000012477	CPSF2	100	96.296	Procavia_capensis
ENSTGUG00000012571	-	100	96.552	ENSPCOG00000026387	CPSF2	100	96.552	Propithecus_coquereli
ENSTGUG00000012571	-	65	98.469	ENSPVAG00000004223	CPSF2	65	98.469	Pteropus_vampyrus
ENSTGUG00000012571	-	100	85.551	ENSPNYG00000023356	cpsf2	100	85.551	Pundamilia_nyererei
ENSTGUG00000012571	-	100	86.785	ENSPNAG00000001849	cpsf2	100	86.785	Pygocentrus_nattereri
ENSTGUG00000012571	-	100	96.296	ENSRNOG00000005733	Cpsf2	100	96.296	Rattus_norvegicus
ENSTGUG00000012571	-	100	96.552	ENSRBIG00000044792	CPSF2	100	96.552	Rhinopithecus_bieti
ENSTGUG00000012571	-	100	96.552	ENSRROG00000034875	CPSF2	100	96.552	Rhinopithecus_roxellana
ENSTGUG00000012571	-	100	96.424	ENSSBOG00000024571	CPSF2	100	96.424	Saimiri_boliviensis_boliviensis
ENSTGUG00000012571	-	100	97.063	ENSSHAG00000010458	CPSF2	100	97.063	Sarcophilus_harrisii
ENSTGUG00000012571	-	100	86.802	ENSSFOG00015002117	cpsf2	100	87.039	Scleropages_formosus
ENSTGUG00000012571	-	100	83.838	ENSSMAG00000002001	cpsf2	100	84.791	Scophthalmus_maximus
ENSTGUG00000012571	-	100	86.168	ENSSDUG00000004084	cpsf2	100	86.168	Seriola_dumerili
ENSTGUG00000012571	-	100	86.058	ENSSLDG00000024330	cpsf2	100	86.058	Seriola_lalandi_dorsalis
ENSTGUG00000012571	-	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSTGUG00000012571	-	100	97.063	ENSSPUG00000013485	CPSF2	100	97.063	Sphenodon_punctatus
ENSTGUG00000012571	-	100	85.025	ENSSPAG00000013284	cpsf2	100	85.025	Stegastes_partitus
ENSTGUG00000012571	-	100	96.424	ENSSSCG00000002447	CPSF2	100	96.424	Sus_scrofa
ENSTGUG00000012571	-	100	84.684	ENSTRUG00000003742	cpsf2	100	84.684	Takifugu_rubripes
ENSTGUG00000012571	-	100	83.671	ENSTNIG00000012228	cpsf2	100	84.430	Tetraodon_nigroviridis
ENSTGUG00000012571	-	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSTGUG00000012571	-	88	97.917	ENSTTRG00000008697	CPSF2	88	97.917	Tursiops_truncatus
ENSTGUG00000012571	-	100	96.552	ENSUAMG00000028071	CPSF2	100	96.552	Ursus_americanus
ENSTGUG00000012571	-	100	96.552	ENSUMAG00000005029	CPSF2	100	96.552	Ursus_maritimus
ENSTGUG00000012571	-	99	96.419	ENSVPAG00000003503	CPSF2	100	96.419	Vicugna_pacos
ENSTGUG00000012571	-	100	96.424	ENSVVUG00000024642	CPSF2	100	96.424	Vulpes_vulpes
ENSTGUG00000012571	-	100	92.209	ENSXETG00000010289	cpsf2	100	92.209	Xenopus_tropicalis
ENSTGUG00000012571	-	100	85.660	ENSXCOG00000001764	cpsf2	100	85.660	Xiphophorus_couchianus
ENSTGUG00000012571	-	100	85.787	ENSXMAG00000017048	cpsf2	100	85.787	Xiphophorus_maculatus