EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000012980 (Gene tree)
Gene ID: -
Gene Symbol: RNASEH1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 5904 bases
Position: chr3:96263104-96269007
Accession: 100226884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000013367	RNase_H	PF00075.24	9.2e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000013519	-	1275	XM_012572773	ENSTGUP00000013367	299 (aa)	XP_012428227	H0ZRX3

Gene Model

Click here to download ENSTGUG00000012980's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000012980's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000012980	RNASEH1	99	54.575	ENSG00000171865	RNASEH1	99	54.934	Homo_sapiens
ENSTGUG00000012980	RNASEH1	93	56.786	ENSAPOG00000000412	rnaseh1	90	56.228	Acanthochromis_polyacanthus
ENSTGUG00000012980	RNASEH1	92	58.633	ENSAMEG00000018433	RNASEH1	96	56.081	Ailuropoda_melanoleuca
ENSTGUG00000012980	RNASEH1	93	55.755	ENSACIG00000014666	rnaseh1	88	56.835	Amphilophus_citrinellus
ENSTGUG00000012980	RNASEH1	93	56.429	ENSAOCG00000015210	rnaseh1	89	56.272	Amphiprion_ocellaris
ENSTGUG00000012980	RNASEH1	93	56.786	ENSAPEG00000014104	rnaseh1	89	56.631	Amphiprion_percula
ENSTGUG00000012980	RNASEH1	93	56.989	ENSATEG00000000598	rnaseh1	95	56.429	Anabas_testudineus
ENSTGUG00000012980	RNASEH1	88	76.981	ENSAPLG00000001961	RNASEH1	100	76.515	Anas_platyrhynchos
ENSTGUG00000012980	RNASEH1	99	52.134	ENSACAG00000016857	rnaseh1	99	52.134	Anolis_carolinensis
ENSTGUG00000012980	RNASEH1	92	57.914	ENSANAG00000024055	RNASEH1	90	57.914	Aotus_nancymaae
ENSTGUG00000012980	RNASEH1	93	56.028	ENSACLG00000006741	rnaseh1	88	55.245	Astatotilapia_calliptera
ENSTGUG00000012980	RNASEH1	95	48.264	ENSAMXG00000042940	rnaseh1	99	48.944	Astyanax_mexicanus
ENSTGUG00000012980	RNASEH1	99	56.811	ENSBTAG00000016235	RNASEH1	99	56.811	Bos_taurus
ENSTGUG00000012980	RNASEH1	92	36.131	WBGene00004382	rnh-1.0	95	37.624	Caenorhabditis_elegans
ENSTGUG00000012980	RNASEH1	92	57.447	ENSCJAG00000035450	RNASEH1	90	56.383	Callithrix_jacchus
ENSTGUG00000012980	RNASEH1	98	59.122	ENSCAFG00000003259	RNASEH1	96	57.823	Canis_familiaris
ENSTGUG00000012980	RNASEH1	51	75.000	ENSCAFG00020004994	RNASEH1	98	75.000	Canis_lupus_dingo
ENSTGUG00000012980	RNASEH1	97	58.163	ENSCHIG00000022264	-	95	57.338	Capra_hircus
ENSTGUG00000012980	RNASEH1	85	46.875	ENSCHIG00000022230	-	99	46.094	Capra_hircus
ENSTGUG00000012980	RNASEH1	96	58.219	ENSTSYG00000012926	RNASEH1	92	56.997	Carlito_syrichta
ENSTGUG00000012980	RNASEH1	86	59.302	ENSCAPG00000004813	RNASEH1	98	58.915	Cavia_aperea
ENSTGUG00000012980	RNASEH1	99	56.291	ENSCPOG00000022278	Rnaseh1	96	55.960	Cavia_porcellus
ENSTGUG00000012980	RNASEH1	92	58.214	ENSCCAG00000038017	RNASEH1	90	57.500	Cebus_capucinus
ENSTGUG00000012980	RNASEH1	99	56.250	ENSCATG00000016515	-	99	55.082	Cercocebus_atys
ENSTGUG00000012980	RNASEH1	98	52.203	ENSCATG00000016818	-	99	50.492	Cercocebus_atys
ENSTGUG00000012980	RNASEH1	99	56.352	ENSCLAG00000002440	RNASEH1	99	55.049	Chinchilla_lanigera
ENSTGUG00000012980	RNASEH1	99	56.393	ENSCSAG00000006943	RNASEH1	99	55.229	Chlorocebus_sabaeus
ENSTGUG00000012980	RNASEH1	61	72.376	ENSCHOG00000008547	RNASEH1	87	72.376	Choloepus_hoffmanni
ENSTGUG00000012980	RNASEH1	93	67.870	ENSCPBG00000021620	RNASEH1	99	67.870	Chrysemys_picta_bellii
ENSTGUG00000012980	RNASEH1	97	36.897	ENSCING00000014054	-	97	36.897	Ciona_intestinalis
ENSTGUG00000012980	RNASEH1	79	37.344	ENSCSAVG00000000009	-	97	37.344	Ciona_savignyi
ENSTGUG00000012980	RNASEH1	99	56.393	ENSCANG00000037763	RNASEH1	99	55.738	Colobus_angolensis_palliatus
ENSTGUG00000012980	RNASEH1	99	56.766	ENSCGRG00001008950	Rnaseh1	99	55.776	Cricetulus_griseus_chok1gshd
ENSTGUG00000012980	RNASEH1	99	56.766	ENSCGRG00000006029	Rnaseh1	99	55.776	Cricetulus_griseus_crigri
ENSTGUG00000012980	RNASEH1	94	51.246	ENSCSEG00000005741	rnaseh1	95	50.890	Cynoglossus_semilaevis
ENSTGUG00000012980	RNASEH1	99	52.769	ENSCVAG00000018717	rnaseh1	97	53.135	Cyprinodon_variegatus
ENSTGUG00000012980	RNASEH1	95	53.287	ENSDARG00000042571	rnaseh1	99	53.793	Danio_rerio
ENSTGUG00000012980	RNASEH1	98	56.463	ENSDNOG00000016056	RNASEH1	95	55.405	Dasypus_novemcinctus
ENSTGUG00000012980	RNASEH1	99	56.623	ENSDORG00000000704	Rnaseh1	99	56.436	Dipodomys_ordii
ENSTGUG00000012980	RNASEH1	93	37.415	FBgn0023171	rnh1	94	36.395	Drosophila_melanogaster
ENSTGUG00000012980	RNASEH1	92	56.228	ENSETEG00000012674	RNASEH1	89	56.228	Echinops_telfairi
ENSTGUG00000012980	RNASEH1	91	42.652	ENSEBUG00000006116	rnaseh1	77	42.294	Eptatretus_burgeri
ENSTGUG00000012980	RNASEH1	92	47.297	ENSEBUG00000008898	rnaseh1	98	47.297	Eptatretus_burgeri
ENSTGUG00000012980	RNASEH1	98	57.667	ENSEASG00005022200	RNASEH1	94	57.667	Equus_asinus_asinus
ENSTGUG00000012980	RNASEH1	98	57.667	ENSECAG00000020695	RNASEH1	94	57.667	Equus_caballus
ENSTGUG00000012980	RNASEH1	93	55.714	ENSELUG00000010112	rnaseh1	91	55.914	Esox_lucius
ENSTGUG00000012980	RNASEH1	98	57.823	ENSFCAG00000025832	RNASEH1	89	59.420	Felis_catus
ENSTGUG00000012980	RNASEH1	100	87.625	ENSFALG00000002069	RNASEH1	100	87.291	Ficedula_albicollis
ENSTGUG00000012980	RNASEH1	99	55.627	ENSFDAG00000002035	RNASEH1	88	56.270	Fukomys_damarensis
ENSTGUG00000012980	RNASEH1	99	52.475	ENSGMOG00000013818	rnaseh1	99	53.135	Gadus_morhua
ENSTGUG00000012980	RNASEH1	99	78.859	ENSGALG00000016389	RNASEH1	99	78.859	Gallus_gallus
ENSTGUG00000012980	RNASEH1	93	55.477	ENSGAFG00000001776	rnaseh1	96	53.559	Gambusia_affinis
ENSTGUG00000012980	RNASEH1	93	55.556	ENSGACG00000011935	rnaseh1	90	55.197	Gasterosteus_aculeatus
ENSTGUG00000012980	RNASEH1	93	67.870	ENSGAGG00000009150	RNASEH1	62	67.870	Gopherus_agassizii
ENSTGUG00000012980	RNASEH1	99	55.263	ENSGGOG00000034822	RNASEH1	99	54.934	Gorilla_gorilla
ENSTGUG00000012980	RNASEH1	93	56.028	ENSHBUG00000004666	rnaseh1	88	54.737	Haplochromis_burtoni
ENSTGUG00000012980	RNASEH1	93	57.554	ENSHGLG00000002585	Rnaseh1	83	57.040	Heterocephalus_glaber_female
ENSTGUG00000012980	RNASEH1	93	57.554	ENSHGLG00100005105	Rnaseh1	83	57.040	Heterocephalus_glaber_male
ENSTGUG00000012980	RNASEH1	94	56.491	ENSHCOG00000012329	rnaseh1	90	56.098	Hippocampus_comes
ENSTGUG00000012980	RNASEH1	94	53.214	ENSIPUG00000023060	rnaseh1	98	53.214	Ictalurus_punctatus
ENSTGUG00000012980	RNASEH1	93	55.755	ENSSTOG00000012774	RNASEH1	92	54.676	Ictidomys_tridecemlineatus
ENSTGUG00000012980	RNASEH1	90	49.446	ENSJJAG00000008994	-	89	48.708	Jaculus_jaculus
ENSTGUG00000012980	RNASEH1	93	54.839	ENSJJAG00000021481	-	90	54.122	Jaculus_jaculus
ENSTGUG00000012980	RNASEH1	84	58.333	ENSJJAG00000020238	Rnaseh1	90	57.540	Jaculus_jaculus
ENSTGUG00000012980	RNASEH1	99	52.318	ENSKMAG00000001373	rnaseh1	97	52.318	Kryptolebias_marmoratus
ENSTGUG00000012980	RNASEH1	94	53.929	ENSLBEG00000004480	rnaseh1	97	53.571	Labrus_bergylta
ENSTGUG00000012980	RNASEH1	94	53.873	ENSLACG00000007100	RNASEH1	90	54.286	Latimeria_chalumnae
ENSTGUG00000012980	RNASEH1	93	56.989	ENSLOCG00000017212	rnaseh1	98	58.065	Lepisosteus_oculatus
ENSTGUG00000012980	RNASEH1	98	58.305	ENSLAFG00000015091	RNASEH1	96	56.610	Loxodonta_africana
ENSTGUG00000012980	RNASEH1	98	50.676	ENSMFAG00000002323	-	96	51.515	Macaca_fascicularis
ENSTGUG00000012980	RNASEH1	99	55.263	ENSMFAG00000000063	-	99	54.605	Macaca_fascicularis
ENSTGUG00000012980	RNASEH1	98	51.689	ENSMMUG00000019280	-	95	52.041	Macaca_mulatta
ENSTGUG00000012980	RNASEH1	98	51.351	ENSMNEG00000029676	-	96	51.351	Macaca_nemestrina
ENSTGUG00000012980	RNASEH1	99	55.592	ENSMNEG00000040183	-	99	54.934	Macaca_nemestrina
ENSTGUG00000012980	RNASEH1	98	54.209	ENSMLEG00000028662	-	95	54.422	Mandrillus_leucophaeus
ENSTGUG00000012980	RNASEH1	86	57.692	ENSMLEG00000039352	-	98	57.692	Mandrillus_leucophaeus
ENSTGUG00000012980	RNASEH1	92	55.435	ENSMAMG00000019725	rnaseh1	94	55.072	Mastacembelus_armatus
ENSTGUG00000012980	RNASEH1	93	56.028	ENSMZEG00005013006	rnaseh1	88	55.245	Maylandia_zebra
ENSTGUG00000012980	RNASEH1	84	77.689	ENSMGAG00000013979	RNASEH1	99	77.200	Meleagris_gallopavo
ENSTGUG00000012980	RNASEH1	99	55.229	ENSMAUG00000014957	Rnaseh1	100	54.248	Mesocricetus_auratus
ENSTGUG00000012980	RNASEH1	92	61.594	ENSMICG00000033156	RNASEH1	89	60.870	Microcebus_murinus
ENSTGUG00000012980	RNASEH1	93	55.872	ENSMOCG00000015522	Rnaseh1	90	56.272	Microtus_ochrogaster
ENSTGUG00000012980	RNASEH1	92	54.317	ENSMMOG00000015902	rnaseh1	88	53.546	Mola_mola
ENSTGUG00000012980	RNASEH1	99	56.419	ENSMODG00000014491	-	93	55.743	Monodelphis_domestica
ENSTGUG00000012980	RNASEH1	86	48.249	ENSMODG00000028814	-	96	47.860	Monodelphis_domestica
ENSTGUG00000012980	RNASEH1	92	55.674	ENSMALG00000010565	rnaseh1	88	55.036	Monopterus_albus
ENSTGUG00000012980	RNASEH1	99	53.795	MGP_CAROLIEiJ_G0017660	Rnaseh1	99	53.795	Mus_caroli
ENSTGUG00000012980	RNASEH1	99	53.795	ENSMUSG00000020630	Rnaseh1	99	53.795	Mus_musculus
ENSTGUG00000012980	RNASEH1	99	53.795	MGP_PahariEiJ_G0029418	Rnaseh1	99	53.795	Mus_pahari
ENSTGUG00000012980	RNASEH1	99	53.795	MGP_SPRETEiJ_G0018502	Rnaseh1	99	53.795	Mus_spretus
ENSTGUG00000012980	RNASEH1	67	64.500	ENSMPUG00000012984	RNASEH1	95	64.500	Mustela_putorius_furo
ENSTGUG00000012980	RNASEH1	93	57.500	ENSNGAG00000015966	Rnaseh1	85	57.914	Nannospalax_galili
ENSTGUG00000012980	RNASEH1	93	56.028	ENSNBRG00000008739	rnaseh1	88	55.245	Neolamprologus_brichardi
ENSTGUG00000012980	RNASEH1	85	53.101	ENSNLEG00000000059	-	88	53.101	Nomascus_leucogenys
ENSTGUG00000012980	RNASEH1	99	46.711	ENSNLEG00000015400	RNASEH1	99	46.053	Nomascus_leucogenys
ENSTGUG00000012980	RNASEH1	95	41.053	ENSMEUG00000003610	-	93	40.702	Notamacropus_eugenii
ENSTGUG00000012980	RNASEH1	92	55.914	ENSOPRG00000005072	RNASEH1	90	55.319	Ochotona_princeps
ENSTGUG00000012980	RNASEH1	99	55.229	ENSODEG00000000235	Rnaseh1	96	55.592	Octodon_degus
ENSTGUG00000012980	RNASEH1	93	56.028	ENSONIG00000018697	rnaseh1	98	55.245	Oreochromis_niloticus
ENSTGUG00000012980	RNASEH1	92	59.928	ENSOCUG00000006117	RNASEH1	90	58.214	Oryctolagus_cuniculus
ENSTGUG00000012980	RNASEH1	93	55.556	ENSORLG00000018127	rnaseh1	95	55.036	Oryzias_latipes
ENSTGUG00000012980	RNASEH1	93	55.556	ENSORLG00020013660	rnaseh1	88	55.036	Oryzias_latipes_hni
ENSTGUG00000012980	RNASEH1	93	55.556	ENSORLG00015011338	rnaseh1	88	55.036	Oryzias_latipes_hsok
ENSTGUG00000012980	RNASEH1	89	49.275	ENSOMEG00000004710	rnaseh1	97	49.822	Oryzias_melastigma
ENSTGUG00000012980	RNASEH1	92	59.353	ENSOGAG00000017176	RNASEH1	90	57.194	Otolemur_garnettii
ENSTGUG00000012980	RNASEH1	94	51.748	ENSOARG00000005386	RNASEH1	90	50.709	Ovis_aries
ENSTGUG00000012980	RNASEH1	99	54.575	ENSPPAG00000034221	RNASEH1	99	54.934	Pan_paniscus
ENSTGUG00000012980	RNASEH1	98	57.483	ENSPPRG00000015513	RNASEH1	89	59.058	Panthera_pardus
ENSTGUG00000012980	RNASEH1	87	59.846	ENSPTIG00000019034	RNASEH1	84	58.687	Panthera_tigris_altaica
ENSTGUG00000012980	RNASEH1	99	54.575	ENSPTRG00000011614	RNASEH1	99	54.934	Pan_troglodytes
ENSTGUG00000012980	RNASEH1	92	50.714	ENSPTRG00000043403	-	99	49.822	Pan_troglodytes
ENSTGUG00000012980	RNASEH1	99	49.508	ENSPANG00000018246	-	99	49.186	Papio_anubis
ENSTGUG00000012980	RNASEH1	99	56.393	ENSPANG00000000443	RNASEH1	98	57.955	Papio_anubis
ENSTGUG00000012980	RNASEH1	92	53.091	ENSPKIG00000003146	rnaseh1	97	54.182	Paramormyrops_kingsleyae
ENSTGUG00000012980	RNASEH1	99	63.787	ENSPSIG00000002937	RNASEH1	99	66.426	Pelodiscus_sinensis
ENSTGUG00000012980	RNASEH1	96	52.778	ENSPMGG00000017463	rnaseh1	95	51.736	Periophthalmus_magnuspinnatus
ENSTGUG00000012980	RNASEH1	99	55.844	ENSPEMG00000022465	-	99	55.556	Peromyscus_maniculatus_bairdii
ENSTGUG00000012980	RNASEH1	95	55.594	ENSPCIG00000023334	-	92	55.594	Phascolarctos_cinereus
ENSTGUG00000012980	RNASEH1	50	40.789	ENSPCIG00000026047	-	85	40.789	Phascolarctos_cinereus
ENSTGUG00000012980	RNASEH1	93	55.830	ENSPFOG00000002841	rnaseh1	91	55.914	Poecilia_formosa
ENSTGUG00000012980	RNASEH1	69	45.192	ENSPLAG00000021349	-	75	45.455	Poecilia_latipinna
ENSTGUG00000012980	RNASEH1	97	54.181	ENSPMEG00000016826	rnaseh1	96	54.237	Poecilia_mexicana
ENSTGUG00000012980	RNASEH1	93	55.357	ENSPREG00000012197	rnaseh1	91	55.357	Poecilia_reticulata
ENSTGUG00000012980	RNASEH1	97	47.619	ENSPPYG00000025873	RNASEH1	95	46.939	Pongo_abelii
ENSTGUG00000012980	RNASEH1	91	51.064	ENSPPYG00000008067	-	100	50.355	Pongo_abelii
ENSTGUG00000012980	RNASEH1	98	57.338	ENSPCAG00000002500	RNASEH1	95	56.314	Procavia_capensis
ENSTGUG00000012980	RNASEH1	93	54.317	ENSPCOG00000019444	RNASEH1	89	53.986	Propithecus_coquereli
ENSTGUG00000012980	RNASEH1	92	60.072	ENSPVAG00000002070	RNASEH1	90	58.333	Pteropus_vampyrus
ENSTGUG00000012980	RNASEH1	93	55.674	ENSPNYG00000001292	rnaseh1	88	55.755	Pundamilia_nyererei
ENSTGUG00000012980	RNASEH1	95	54.737	ENSPNAG00000022344	rnaseh1	92	54.737	Pygocentrus_nattereri
ENSTGUG00000012980	RNASEH1	99	54.455	ENSRNOG00000008584	Rnaseh1	99	54.125	Rattus_norvegicus
ENSTGUG00000012980	RNASEH1	99	57.049	ENSRBIG00000034222	RNASEH1	98	55.556	Rhinopithecus_bieti
ENSTGUG00000012980	RNASEH1	99	56.721	ENSRROG00000041761	RNASEH1	98	55.738	Rhinopithecus_roxellana
ENSTGUG00000012980	RNASEH1	92	58.214	ENSSBOG00000025411	RNASEH1	90	57.500	Saimiri_boliviensis_boliviensis
ENSTGUG00000012980	RNASEH1	94	60.211	ENSSHAG00000013051	RNASEH1	90	59.790	Sarcophilus_harrisii
ENSTGUG00000012980	RNASEH1	93	52.650	ENSSFOG00015002709	rnaseh1	91	53.237	Scleropages_formosus
ENSTGUG00000012980	RNASEH1	93	54.676	ENSSMAG00000007586	rnaseh1	88	54.676	Scophthalmus_maximus
ENSTGUG00000012980	RNASEH1	92	55.914	ENSSDUG00000008217	rnaseh1	94	55.914	Seriola_dumerili
ENSTGUG00000012980	RNASEH1	98	51.178	ENSSLDG00000000442	rnaseh1	97	52.189	Seriola_lalandi_dorsalis
ENSTGUG00000012980	RNASEH1	99	63.211	ENSSPUG00000006644	RNASEH1	99	62.876	Sphenodon_punctatus
ENSTGUG00000012980	RNASEH1	93	57.143	ENSSPAG00000009353	rnaseh1	88	56.989	Stegastes_partitus
ENSTGUG00000012980	RNASEH1	95	58.042	ENSSSCG00000025305	RNASEH1	97	57.047	Sus_scrofa
ENSTGUG00000012980	RNASEH1	93	55.914	ENSTRUG00000015774	rnaseh1	96	54.895	Takifugu_rubripes
ENSTGUG00000012980	RNASEH1	93	56.835	ENSTNIG00000010715	rnaseh1	96	56.835	Tetraodon_nigroviridis
ENSTGUG00000012980	RNASEH1	94	55.516	ENSTTRG00000001615	RNASEH1	91	54.255	Tursiops_truncatus
ENSTGUG00000012980	RNASEH1	52	74.359	ENSUAMG00000018254	RNASEH1	81	74.359	Ursus_americanus
ENSTGUG00000012980	RNASEH1	73	58.257	ENSUMAG00000003941	RNASEH1	66	56.881	Ursus_maritimus
ENSTGUG00000012980	RNASEH1	98	45.485	ENSVPAG00000011589	RNASEH1	96	45.485	Vicugna_pacos
ENSTGUG00000012980	RNASEH1	98	58.163	ENSVVUG00000008633	RNASEH1	86	57.823	Vulpes_vulpes
ENSTGUG00000012980	RNASEH1	66	56.954	ENSXETG00000030371	-	100	56.954	Xenopus_tropicalis
ENSTGUG00000012980	RNASEH1	92	51.748	ENSXETG00000001212	rnaseh1	100	58.696	Xenopus_tropicalis
ENSTGUG00000012980	RNASEH1	97	52.508	ENSXMAG00000002357	rnaseh1	96	52.542	Xiphophorus_maculatus