EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000013118 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 1590 bases
Position: chr1:88175757-88177346
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000013509	APOBEC_N	PF08210.11	1.1e-27	1	1
ENSTGUP00000013509	APOBEC_C	PF05240.14	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000013662	-	426	-	ENSTGUP00000013509	142 (aa)	-	H0ZSB3

Gene Model

Click here to download ENSTGUG00000013118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000013118's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000013118	-	53	48.684	ENSTGUG00000013120	-	100	48.684
ENSTGUG00000013118	-	92	37.956	ENSTGUG00000013115	AICDA	70	37.956

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000013118	-	99	50.694	ENSG00000111701	APOBEC1	61	50.694	Homo_sapiens
ENSTGUG00000013118	-	99	50.694	ENSAMEG00000007098	APOBEC1	61	50.694	Ailuropoda_melanoleuca
ENSTGUG00000013118	-	99	50.350	ENSACAG00000028578	-	78	50.350	Anolis_carolinensis
ENSTGUG00000013118	-	99	49.655	ENSANAG00000027743	APOBEC1	58	49.655	Aotus_nancymaae
ENSTGUG00000013118	-	99	47.222	ENSBTAG00000014683	APOBEC1	61	47.222	Bos_taurus
ENSTGUG00000013118	-	99	48.966	ENSCJAG00000005398	APOBEC1	65	48.966	Callithrix_jacchus
ENSTGUG00000013118	-	99	50.694	ENSCAFG00000013901	APOBEC1	61	50.694	Canis_familiaris
ENSTGUG00000013118	-	99	50.694	ENSCAFG00020003511	APOBEC1	60	50.694	Canis_lupus_dingo
ENSTGUG00000013118	-	99	48.611	ENSCHIG00000011898	APOBEC1	62	45.833	Capra_hircus
ENSTGUG00000013118	-	88	51.938	ENSTSYG00000029141	APOBEC1	91	51.938	Carlito_syrichta
ENSTGUG00000013118	-	99	46.528	ENSCAPG00000015882	-	67	46.528	Cavia_aperea
ENSTGUG00000013118	-	99	46.528	ENSCPOG00000033068	APOBEC1	61	46.528	Cavia_porcellus
ENSTGUG00000013118	-	99	50.345	ENSCCAG00000022258	APOBEC1	61	50.345	Cebus_capucinus
ENSTGUG00000013118	-	99	50.694	ENSCATG00000021613	APOBEC1	58	50.694	Cercocebus_atys
ENSTGUG00000013118	-	99	47.917	ENSCLAG00000014645	APOBEC1	62	47.917	Chinchilla_lanigera
ENSTGUG00000013118	-	76	54.054	ENSCSAG00000009817	APOBEC1	58	54.054	Chlorocebus_sabaeus
ENSTGUG00000013118	-	99	62.069	ENSCPBG00000014331	-	60	62.069	Chrysemys_picta_bellii
ENSTGUG00000013118	-	99	46.528	ENSCPBG00000014327	-	57	46.528	Chrysemys_picta_bellii
ENSTGUG00000013118	-	97	47.887	ENSCPBG00000014328	-	62	47.887	Chrysemys_picta_bellii
ENSTGUG00000013118	-	99	53.472	ENSCPBG00000014335	-	58	53.472	Chrysemys_picta_bellii
ENSTGUG00000013118	-	93	46.324	ENSCPBG00000017398	-	60	46.324	Chrysemys_picta_bellii
ENSTGUG00000013118	-	99	50.000	ENSCANG00000038359	APOBEC1	62	50.000	Colobus_angolensis_palliatus
ENSTGUG00000013118	-	100	52.740	ENSCGRG00001011130	Apobec1	63	52.740	Cricetulus_griseus_chok1gshd
ENSTGUG00000013118	-	100	52.740	ENSCGRG00000008644	Apobec1	63	52.740	Cricetulus_griseus_crigri
ENSTGUG00000013118	-	100	53.425	ENSDNOG00000010926	APOBEC1	61	53.425	Dasypus_novemcinctus
ENSTGUG00000013118	-	99	48.252	ENSDORG00000023717	Apobec1	67	48.252	Dipodomys_ordii
ENSTGUG00000013118	-	100	51.351	ENSETEG00000004867	APOBEC1	62	51.351	Echinops_telfairi
ENSTGUG00000013118	-	99	50.694	ENSEASG00005015951	APOBEC1	60	50.694	Equus_asinus_asinus
ENSTGUG00000013118	-	76	54.955	ENSECAG00000017163	APOBEC1	58	54.955	Equus_caballus
ENSTGUG00000013118	-	89	48.485	ENSEEUG00000007530	-	61	48.485	Erinaceus_europaeus
ENSTGUG00000013118	-	99	50.000	ENSEEUG00000009112	-	64	50.000	Erinaceus_europaeus
ENSTGUG00000013118	-	100	50.685	ENSFCAG00000009350	APOBEC1	61	50.685	Felis_catus
ENSTGUG00000013118	-	100	80.986	ENSFALG00000007257	-	74	80.986	Ficedula_albicollis
ENSTGUG00000013118	-	90	49.242	ENSFDAG00000018470	APOBEC1	63	49.242	Fukomys_damarensis
ENSTGUG00000013118	-	97	47.183	ENSGAGG00000006624	-	51	47.183	Gopherus_agassizii
ENSTGUG00000013118	-	96	53.521	ENSGAGG00000004947	-	81	54.762	Gopherus_agassizii
ENSTGUG00000013118	-	96	60.000	ENSGAGG00000011837	-	75	60.000	Gopherus_agassizii
ENSTGUG00000013118	-	98	48.252	ENSGAGG00000021745	-	53	48.252	Gopherus_agassizii
ENSTGUG00000013118	-	97	46.479	ENSGAGG00000021744	-	56	46.479	Gopherus_agassizii
ENSTGUG00000013118	-	99	47.586	ENSHGLG00000001495	APOBEC1	61	47.586	Heterocephalus_glaber_female
ENSTGUG00000013118	-	99	48.276	ENSHGLG00100002187	APOBEC1	61	48.276	Heterocephalus_glaber_male
ENSTGUG00000013118	-	95	47.482	ENSSTOG00000021971	APOBEC1	99	45.918	Ictidomys_tridecemlineatus
ENSTGUG00000013118	-	99	50.000	ENSJJAG00000022108	Apobec1	62	50.000	Jaculus_jaculus
ENSTGUG00000013118	-	99	52.083	ENSLAFG00000030837	APOBEC1	64	52.083	Loxodonta_africana
ENSTGUG00000013118	-	99	50.694	ENSMFAG00000000277	APOBEC1	58	54.955	Macaca_fascicularis
ENSTGUG00000013118	-	99	50.694	ENSMNEG00000029670	APOBEC1	61	50.694	Macaca_nemestrina
ENSTGUG00000013118	-	99	50.694	ENSMLEG00000036301	APOBEC1	61	50.694	Mandrillus_leucophaeus
ENSTGUG00000013118	-	100	52.055	ENSMAUG00000022167	Apobec1	65	52.055	Mesocricetus_auratus
ENSTGUG00000013118	-	99	51.389	ENSMICG00000043645	APOBEC1	62	50.694	Microcebus_murinus
ENSTGUG00000013118	-	67	48.485	ENSMOCG00000016170	-	87	48.485	Microtus_ochrogaster
ENSTGUG00000013118	-	99	47.586	ENSMODG00000018004	APOBEC1	60	47.586	Monodelphis_domestica
ENSTGUG00000013118	-	100	54.110	ENSMUSG00000040613	Apobec1	88	50.467	Mus_musculus
ENSTGUG00000013118	-	100	54.110	MGP_PahariEiJ_G0022580	-	88	50.467	Mus_pahari
ENSTGUG00000013118	-	100	54.110	MGP_SPRETEiJ_G0029857	Apobec1	88	50.467	Mus_spretus
ENSTGUG00000013118	-	99	48.611	ENSMPUG00000017532	APOBEC1	61	48.611	Mustela_putorius_furo
ENSTGUG00000013118	-	100	52.055	ENSNGAG00000022607	Apobec1	63	52.055	Nannospalax_galili
ENSTGUG00000013118	-	99	49.306	ENSNLEG00000005342	APOBEC1	61	49.306	Nomascus_leucogenys
ENSTGUG00000013118	-	99	45.833	ENSMEUG00000013406	APOBEC1	61	45.833	Notamacropus_eugenii
ENSTGUG00000013118	-	99	53.846	ENSOPRG00000009508	-	80	53.846	Ochotona_princeps
ENSTGUG00000013118	-	66	39.796	ENSODEG00000001157	-	99	39.796	Octodon_degus
ENSTGUG00000013118	-	100	49.315	ENSOCUG00000025736	APOBEC1	54	49.315	Oryctolagus_cuniculus
ENSTGUG00000013118	-	99	48.611	ENSOGAG00000026415	APOBEC1	61	48.611	Otolemur_garnettii
ENSTGUG00000013118	-	100	48.630	ENSOARG00000002072	APOBEC1	61	48.630	Ovis_aries
ENSTGUG00000013118	-	99	48.227	ENSPPAG00000027657	APOBEC1	57	48.227	Pan_paniscus
ENSTGUG00000013118	-	100	50.685	ENSPPRG00000012182	APOBEC1	61	50.685	Panthera_pardus
ENSTGUG00000013118	-	100	50.685	ENSPTIG00000020280	APOBEC1	61	50.685	Panthera_tigris_altaica
ENSTGUG00000013118	-	99	50.694	ENSPTRG00000004614	APOBEC1	61	50.694	Pan_troglodytes
ENSTGUG00000013118	-	99	50.694	ENSPANG00000021027	APOBEC1	61	50.694	Papio_anubis
ENSTGUG00000013118	-	99	45.517	ENSPSIG00000012568	-	63	45.517	Pelodiscus_sinensis
ENSTGUG00000013118	-	68	58.537	ENSPSIG00000012791	-	57	58.537	Pelodiscus_sinensis
ENSTGUG00000013118	-	100	52.740	ENSPEMG00000023841	Apobec1	63	52.740	Peromyscus_maniculatus_bairdii
ENSTGUG00000013118	-	99	47.222	ENSPCIG00000023973	APOBEC1	61	47.222	Phascolarctos_cinereus
ENSTGUG00000013118	-	99	50.000	ENSPPYG00000004228	APOBEC1	58	50.000	Pongo_abelii
ENSTGUG00000013118	-	99	48.611	ENSPCAG00000008733	APOBEC1	76	48.611	Procavia_capensis
ENSTGUG00000013118	-	99	50.000	ENSPCOG00000013957	APOBEC1	63	50.000	Propithecus_coquereli
ENSTGUG00000013118	-	89	46.565	ENSPVAG00000010709	APOBEC1	56	46.565	Pteropus_vampyrus
ENSTGUG00000013118	-	100	52.740	ENSRNOG00000015411	Apobec1	63	52.740	Rattus_norvegicus
ENSTGUG00000013118	-	99	49.655	ENSRBIG00000031161	APOBEC1	61	49.655	Rhinopithecus_bieti
ENSTGUG00000013118	-	99	49.655	ENSRROG00000033576	APOBEC1	58	54.054	Rhinopithecus_roxellana
ENSTGUG00000013118	-	99	50.345	ENSSBOG00000030587	APOBEC1	81	50.345	Saimiri_boliviensis_boliviensis
ENSTGUG00000013118	-	99	46.528	ENSSHAG00000008925	APOBEC1	63	46.528	Sarcophilus_harrisii
ENSTGUG00000013118	-	99	51.748	ENSSARG00000000032	-	83	51.748	Sorex_araneus
ENSTGUG00000013118	-	88	50.000	ENSSARG00000011972	-	97	50.000	Sorex_araneus
ENSTGUG00000013118	-	99	48.276	ENSSPUG00000009044	-	56	48.276	Sphenodon_punctatus
ENSTGUG00000013118	-	100	49.315	ENSSSCG00000000668	APOBEC1	61	49.315	Sus_scrofa
ENSTGUG00000013118	-	99	48.966	ENSTBEG00000010043	APOBEC1	61	48.966	Tupaia_belangeri
ENSTGUG00000013118	-	100	47.945	ENSTTRG00000014015	APOBEC1	78	47.945	Tursiops_truncatus
ENSTGUG00000013118	-	99	51.389	ENSUAMG00000011636	APOBEC1	59	51.389	Ursus_americanus
ENSTGUG00000013118	-	99	51.389	ENSUMAG00000016552	APOBEC1	59	51.389	Ursus_maritimus
ENSTGUG00000013118	-	100	49.315	ENSVPAG00000001343	APOBEC1	61	49.315	Vicugna_pacos
ENSTGUG00000013118	-	99	51.389	ENSVVUG00000010522	APOBEC1	61	51.389	Vulpes_vulpes