EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000013171 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 9507 bases
Position: chr1:88872591-88882097
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000013564	MMR_HSR1	PF01926.23	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000013718	-	504	-	ENSTGUP00000013564	167 (aa)	-	H0ZSG8

Gene Model

Click here to download ENSTGUG00000013171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000013171's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000013171	-	87	38.514	ENSTGUG00000002436	RAB33B	65	38.514
ENSTGUG00000013171	-	98	58.788	ENSTGUG00000009776	-	95	58.788
ENSTGUG00000013171	-	96	36.875	ENSTGUG00000006657	RAB14	74	36.875
ENSTGUG00000013171	-	93	35.000	ENSTGUG00000003786	RAB17	74	35.000
ENSTGUG00000013171	-	74	33.594	ENSTGUG00000006516	RAB9B	63	33.594
ENSTGUG00000013171	-	96	41.875	ENSTGUG00000011182	RAB2A	75	41.875
ENSTGUG00000013171	-	90	37.748	ENSTGUG00000003680	-	74	37.748
ENSTGUG00000013171	-	92	41.558	ENSTGUG00000003675	RAB25	72	41.558
ENSTGUG00000013171	-	97	40.741	ENSTGUG00000013470	RAB6A	78	40.741
ENSTGUG00000013171	-	99	40.361	ENSTGUG00000002328	RAB1A	81	40.361
ENSTGUG00000013171	-	95	42.767	ENSTGUG00000012941	RAB30	78	42.767
ENSTGUG00000013171	-	89	30.464	ENSTGUG00000007747	-	72	30.464
ENSTGUG00000013171	-	96	32.919	ENSTGUG00000008195	RAB22A	83	32.919
ENSTGUG00000013171	-	98	53.988	ENSTGUG00000017468	-	77	53.988
ENSTGUG00000013171	-	91	38.816	ENSTGUG00000009279	RAB11A	70	38.816
ENSTGUG00000013171	-	90	36.872	ENSTGUG00000001105	-	73	37.791
ENSTGUG00000013171	-	94	39.873	ENSTGUG00000009889	RAB12	63	39.873
ENSTGUG00000013171	-	95	36.478	ENSTGUG00000003236	RAB5A	74	36.478
ENSTGUG00000013171	-	92	39.610	ENSTGUG00000000084	-	71	39.610
ENSTGUG00000013171	-	92	39.610	ENSTGUG00000009359	RAB35	76	39.610
ENSTGUG00000013171	-	92	31.373	ENSTGUG00000016028	-	72	31.373
ENSTGUG00000013171	-	87	31.507	ENSTGUG00000012794	RAB23	68	33.540
ENSTGUG00000013171	-	92	38.365	ENSTGUG00000005228	RAB33A	76	38.365
ENSTGUG00000013171	-	96	35.366	ENSTGUG00000007832	RAB7A	79	35.366
ENSTGUG00000013171	-	92	34.375	ENSTGUG00000009985	-	66	34.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000013171	-	98	79.878	ENSACAG00000009389	-	98	79.878	Anolis_carolinensis
ENSTGUG00000013171	-	99	75.152	ENSETEG00000005963	-	96	75.152	Echinops_telfairi
ENSTGUG00000013171	-	99	55.152	ENSEEUG00000001438	-	99	55.152	Erinaceus_europaeus
ENSTGUG00000013171	-	97	69.136	ENSGMOG00000006968	-	81	69.136	Gadus_morhua
ENSTGUG00000013171	-	98	69.512	ENSGACG00000013611	-	80	69.512	Gasterosteus_aculeatus
ENSTGUG00000013171	-	99	76.506	ENSLACG00000016518	-	53	76.506	Latimeria_chalumnae
ENSTGUG00000013171	-	83	73.793	ENSLAFG00000016780	-	99	73.793	Loxodonta_africana
ENSTGUG00000013171	-	98	74.233	ENSMLUG00000016268	-	99	74.233	Myotis_lucifugus
ENSTGUG00000013171	-	97	78.395	ENSMEUG00000015626	-	97	78.395	Notamacropus_eugenii
ENSTGUG00000013171	-	99	76.364	ENSOPRG00000007436	-	96	76.364	Ochotona_princeps
ENSTGUG00000013171	-	99	83.030	ENSPSIG00000008757	-	85	83.030	Pelodiscus_sinensis
ENSTGUG00000013171	-	99	60.000	ENSPCAG00000001228	-	95	60.000	Procavia_capensis
ENSTGUG00000013171	-	98	78.528	ENSSHAG00000006833	-	98	78.528	Sarcophilus_harrisii
ENSTGUG00000013171	-	98	71.951	ENSTTRG00000002070	-	95	71.951	Tursiops_truncatus