EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000013635 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 16379 bases
Position: chr1:118452199-118468577
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000014042	CMS1	PF14617.6	2.2e-32	1	1
ENSTGUP00000014042	DEAD	PF00270.29	5.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000014201	CMSS1-201	1269	-	ENSTGUP00000014042	229 (aa)	-	H0ZTU5

Gene Model

Click here to download ENSTGUG00000013635's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000013635's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000013635	CMSS1	100	65.066	ENSG00000184220	CMSS1	98	68.750	Homo_sapiens
ENSTGUG00000013635	CMSS1	88	62.871	ENSAPOG00000010604	cmss1	96	59.494	Acanthochromis_polyacanthus
ENSTGUG00000013635	CMSS1	100	65.217	ENSAMEG00000004092	CMSS1	89	65.217	Ailuropoda_melanoleuca
ENSTGUG00000013635	CMSS1	88	53.465	ENSACIG00000021854	cmss1	75	53.465	Amphilophus_citrinellus
ENSTGUG00000013635	CMSS1	88	62.376	ENSAOCG00000013361	cmss1	76	61.187	Amphiprion_ocellaris
ENSTGUG00000013635	CMSS1	88	62.376	ENSAPEG00000005829	cmss1	76	61.187	Amphiprion_percula
ENSTGUG00000013635	CMSS1	97	60.633	ENSATEG00000008209	cmss1	79	59.825	Anabas_testudineus
ENSTGUG00000013635	CMSS1	100	90.435	ENSAPLG00000010542	CMSS1	100	90.435	Anas_platyrhynchos
ENSTGUG00000013635	CMSS1	100	71.245	ENSACAG00000011065	CMSS1	85	71.245	Anolis_carolinensis
ENSTGUG00000013635	CMSS1	100	65.939	ENSANAG00000023565	CMSS1	87	65.939	Aotus_nancymaae
ENSTGUG00000013635	CMSS1	88	62.871	ENSACLG00000027294	cmss1	69	62.871	Astatotilapia_calliptera
ENSTGUG00000013635	CMSS1	99	58.261	ENSAMXG00000002046	cmss1	78	57.826	Astyanax_mexicanus
ENSTGUG00000013635	CMSS1	99	64.035	ENSBTAG00000013663	CMSS1	83	64.035	Bos_taurus
ENSTGUG00000013635	CMSS1	100	65.939	ENSCJAG00000000610	CMSS1	87	65.939	Callithrix_jacchus
ENSTGUG00000013635	CMSS1	100	65.502	ENSCAFG00000009230	CMSS1	83	65.502	Canis_familiaris
ENSTGUG00000013635	CMSS1	100	65.502	ENSCAFG00020009464	-	84	65.502	Canis_lupus_dingo
ENSTGUG00000013635	CMSS1	88	63.861	ENSCAFG00020024156	-	62	63.861	Canis_lupus_dingo
ENSTGUG00000013635	CMSS1	99	64.912	ENSCHIG00000013003	CMSS1	83	64.912	Capra_hircus
ENSTGUG00000013635	CMSS1	100	64.192	ENSTSYG00000009266	CMSS1	88	64.192	Carlito_syrichta
ENSTGUG00000013635	CMSS1	97	57.399	ENSCAPG00000013584	CMSS1	87	62.366	Cavia_aperea
ENSTGUG00000013635	CMSS1	100	67.249	ENSCPOG00000014680	CMSS1	82	67.249	Cavia_porcellus
ENSTGUG00000013635	CMSS1	100	66.812	ENSCCAG00000034685	CMSS1	87	66.812	Cebus_capucinus
ENSTGUG00000013635	CMSS1	100	65.939	ENSCATG00000031980	CMSS1	88	65.939	Cercocebus_atys
ENSTGUG00000013635	CMSS1	100	66.812	ENSCLAG00000011241	CMSS1	98	66.812	Chinchilla_lanigera
ENSTGUG00000013635	CMSS1	100	65.939	ENSCSAG00000006024	CMSS1	93	65.939	Chlorocebus_sabaeus
ENSTGUG00000013635	CMSS1	100	47.598	ENSCHOG00000012098	CMSS1	83	47.598	Choloepus_hoffmanni
ENSTGUG00000013635	CMSS1	82	41.053	ENSCING00000014848	-	99	41.176	Ciona_intestinalis
ENSTGUG00000013635	CMSS1	55	39.683	ENSCSAVG00000002309	-	99	39.683	Ciona_savignyi
ENSTGUG00000013635	CMSS1	100	65.502	ENSCANG00000031337	CMSS1	88	65.502	Colobus_angolensis_palliatus
ENSTGUG00000013635	CMSS1	100	65.066	ENSCGRG00001014305	Cmss1	82	65.066	Cricetulus_griseus_chok1gshd
ENSTGUG00000013635	CMSS1	100	65.502	ENSCGRG00000006722	Cmss1	89	65.502	Cricetulus_griseus_crigri
ENSTGUG00000013635	CMSS1	88	65.347	ENSCSEG00000004958	cmss1	69	65.347	Cynoglossus_semilaevis
ENSTGUG00000013635	CMSS1	88	61.386	ENSCVAG00000005039	cmss1	75	59.459	Cyprinodon_variegatus
ENSTGUG00000013635	CMSS1	99	53.680	ENSDARG00000112579	cmss1	79	52.814	Danio_rerio
ENSTGUG00000013635	CMSS1	100	64.192	ENSDNOG00000040418	CMSS1	83	64.192	Dasypus_novemcinctus
ENSTGUG00000013635	CMSS1	100	65.502	ENSDORG00000010461	Cmss1	82	65.502	Dipodomys_ordii
ENSTGUG00000013635	CMSS1	58	44.697	ENSEBUG00000002156	-	96	44.697	Eptatretus_burgeri
ENSTGUG00000013635	CMSS1	100	64.629	ENSEASG00005010966	CMSS1	99	64.384	Equus_asinus_asinus
ENSTGUG00000013635	CMSS1	100	65.066	ENSECAG00000015662	CMSS1	99	64.602	Equus_caballus
ENSTGUG00000013635	CMSS1	99	46.053	ENSEEUG00000007624	-	82	46.491	Erinaceus_europaeus
ENSTGUG00000013635	CMSS1	88	59.901	ENSELUG00000019459	cmss1	75	58.407	Esox_lucius
ENSTGUG00000013635	CMSS1	100	65.502	ENSFCAG00000044577	CMSS1	82	65.502	Felis_catus
ENSTGUG00000013635	CMSS1	100	94.760	ENSFALG00000005816	CMSS1	97	94.760	Ficedula_albicollis
ENSTGUG00000013635	CMSS1	99	64.474	ENSFDAG00000012577	CMSS1	100	64.474	Fukomys_damarensis
ENSTGUG00000013635	CMSS1	99	55.217	ENSFHEG00000012008	cmss1	95	55.652	Fundulus_heteroclitus
ENSTGUG00000013635	CMSS1	88	59.406	ENSGMOG00000016729	cmss1	72	59.406	Gadus_morhua
ENSTGUG00000013635	CMSS1	100	88.646	ENSGALG00000015267	CMSS1	88	88.646	Gallus_gallus
ENSTGUG00000013635	CMSS1	90	61.353	ENSGAFG00000021217	cmss1	77	60.891	Gambusia_affinis
ENSTGUG00000013635	CMSS1	95	60.092	ENSGACG00000002798	cmss1	72	60.891	Gasterosteus_aculeatus
ENSTGUG00000013635	CMSS1	100	79.039	ENSGAGG00000019861	CMSS1	89	79.039	Gopherus_agassizii
ENSTGUG00000013635	CMSS1	100	65.939	ENSGGOG00000014125	CMSS1	88	65.939	Gorilla_gorilla
ENSTGUG00000013635	CMSS1	88	62.871	ENSHBUG00000008431	cmss1	71	62.871	Haplochromis_burtoni
ENSTGUG00000013635	CMSS1	99	66.814	ENSHGLG00000019481	CMSS1	92	66.814	Heterocephalus_glaber_female
ENSTGUG00000013635	CMSS1	99	66.814	ENSHGLG00100010314	CMSS1	91	66.814	Heterocephalus_glaber_male
ENSTGUG00000013635	CMSS1	88	63.366	ENSHCOG00000003222	cmss1	68	63.366	Hippocampus_comes
ENSTGUG00000013635	CMSS1	97	59.459	ENSIPUG00000011591	cmss1	77	59.459	Ictalurus_punctatus
ENSTGUG00000013635	CMSS1	100	64.192	ENSSTOG00000019366	CMSS1	82	64.192	Ictidomys_tridecemlineatus
ENSTGUG00000013635	CMSS1	100	65.939	ENSJJAG00000014894	Cmss1	90	66.832	Jaculus_jaculus
ENSTGUG00000013635	CMSS1	88	55.941	ENSKMAG00000002390	cmss1	81	55.941	Kryptolebias_marmoratus
ENSTGUG00000013635	CMSS1	88	60.099	ENSLBEG00000006298	cmss1	83	60.099	Labrus_bergylta
ENSTGUG00000013635	CMSS1	99	65.652	ENSLACG00000009293	CMSS1	100	65.652	Latimeria_chalumnae
ENSTGUG00000013635	CMSS1	99	58.772	ENSLOCG00000009391	cmss1	81	58.333	Lepisosteus_oculatus
ENSTGUG00000013635	CMSS1	99	65.789	ENSLAFG00000017509	CMSS1	100	65.789	Loxodonta_africana
ENSTGUG00000013635	CMSS1	100	65.939	ENSMFAG00000045006	CMSS1	88	65.939	Macaca_fascicularis
ENSTGUG00000013635	CMSS1	100	65.502	ENSMMUG00000002939	CMSS1	97	65.297	Macaca_mulatta
ENSTGUG00000013635	CMSS1	100	65.939	ENSMNEG00000031315	CMSS1	88	65.939	Macaca_nemestrina
ENSTGUG00000013635	CMSS1	100	66.376	ENSMLEG00000033660	CMSS1	88	66.376	Mandrillus_leucophaeus
ENSTGUG00000013635	CMSS1	88	62.376	ENSMAMG00000017176	cmss1	70	62.376	Mastacembelus_armatus
ENSTGUG00000013635	CMSS1	88	62.871	ENSMZEG00005021886	cmss1	69	62.871	Maylandia_zebra
ENSTGUG00000013635	CMSS1	99	88.158	ENSMGAG00000014360	CMSS1	100	88.158	Meleagris_gallopavo
ENSTGUG00000013635	CMSS1	100	44.541	ENSMAUG00000020609	Cmss1	78	43.668	Mesocricetus_auratus
ENSTGUG00000013635	CMSS1	100	64.629	ENSMICG00000048977	CMSS1	88	64.629	Microcebus_murinus
ENSTGUG00000013635	CMSS1	100	65.939	ENSMOCG00000021937	Cmss1	83	65.939	Microtus_ochrogaster
ENSTGUG00000013635	CMSS1	88	60.891	ENSMMOG00000019794	cmss1	84	60.891	Mola_mola
ENSTGUG00000013635	CMSS1	100	68.996	ENSMODG00000002275	CMSS1	86	68.996	Monodelphis_domestica
ENSTGUG00000013635	CMSS1	88	63.366	ENSMALG00000004250	cmss1	69	63.366	Monopterus_albus
ENSTGUG00000013635	CMSS1	100	66.087	MGP_CAROLIEiJ_G0020824	Cmss1	83	66.087	Mus_caroli
ENSTGUG00000013635	CMSS1	100	66.087	ENSMUSG00000022748	Cmss1	83	66.087	Mus_musculus
ENSTGUG00000013635	CMSS1	100	65.652	MGP_PahariEiJ_G0016524	Cmss1	83	65.652	Mus_pahari
ENSTGUG00000013635	CMSS1	100	66.087	MGP_SPRETEiJ_G0021724	Cmss1	83	66.087	Mus_spretus
ENSTGUG00000013635	CMSS1	99	65.789	ENSMPUG00000011324	CMSS1	88	65.789	Mustela_putorius_furo
ENSTGUG00000013635	CMSS1	100	65.801	ENSMLUG00000001131	CMSS1	88	65.801	Myotis_lucifugus
ENSTGUG00000013635	CMSS1	100	65.066	ENSNGAG00000020316	Cmss1	82	65.066	Nannospalax_galili
ENSTGUG00000013635	CMSS1	88	62.871	ENSNBRG00000003095	cmss1	69	62.871	Neolamprologus_brichardi
ENSTGUG00000013635	CMSS1	100	65.939	ENSNLEG00000034172	CMSS1	88	65.939	Nomascus_leucogenys
ENSTGUG00000013635	CMSS1	99	59.211	ENSMEUG00000014505	CMSS1	100	59.211	Notamacropus_eugenii
ENSTGUG00000013635	CMSS1	100	65.502	ENSOPRG00000002986	CMSS1	82	65.502	Ochotona_princeps
ENSTGUG00000013635	CMSS1	95	54.587	ENSODEG00000009446	-	85	54.587	Octodon_degus
ENSTGUG00000013635	CMSS1	99	64.912	ENSODEG00000003558	-	84	64.912	Octodon_degus
ENSTGUG00000013635	CMSS1	100	66.376	ENSODEG00000005226	-	82	66.376	Octodon_degus
ENSTGUG00000013635	CMSS1	100	56.332	ENSODEG00000001853	-	82	56.332	Octodon_degus
ENSTGUG00000013635	CMSS1	88	61.881	ENSONIG00000006678	cmss1	77	61.881	Oreochromis_niloticus
ENSTGUG00000013635	CMSS1	100	72.926	ENSOANG00000007529	CMSS1	100	72.103	Ornithorhynchus_anatinus
ENSTGUG00000013635	CMSS1	100	65.066	ENSOCUG00000025366	CMSS1	83	65.066	Oryctolagus_cuniculus
ENSTGUG00000013635	CMSS1	88	62.376	ENSORLG00000020340	cmss1	75	60.181	Oryzias_latipes
ENSTGUG00000013635	CMSS1	100	51.965	ENSORLG00020012235	cmss1	85	54.950	Oryzias_latipes_hni
ENSTGUG00000013635	CMSS1	88	55.446	ENSORLG00015015551	cmss1	75	55.446	Oryzias_latipes_hsok
ENSTGUG00000013635	CMSS1	88	61.881	ENSOMEG00000012555	cmss1	70	61.881	Oryzias_melastigma
ENSTGUG00000013635	CMSS1	99	64.912	ENSOGAG00000002045	CMSS1	100	64.912	Otolemur_garnettii
ENSTGUG00000013635	CMSS1	99	65.066	ENSOARG00000017899	CMSS1	79	65.066	Ovis_aries
ENSTGUG00000013635	CMSS1	100	65.939	ENSPPAG00000038515	CMSS1	84	65.939	Pan_paniscus
ENSTGUG00000013635	CMSS1	100	65.939	ENSPPRG00000016767	CMSS1	82	65.939	Panthera_pardus
ENSTGUG00000013635	CMSS1	100	65.939	ENSPTIG00000018274	CMSS1	82	65.939	Panthera_tigris_altaica
ENSTGUG00000013635	CMSS1	100	65.502	ENSPTRG00000015157	CMSS1	93	65.502	Pan_troglodytes
ENSTGUG00000013635	CMSS1	99	65.789	ENSPANG00000019980	CMSS1	91	65.789	Papio_anubis
ENSTGUG00000013635	CMSS1	99	61.739	ENSPKIG00000012609	cmss1	85	61.739	Paramormyrops_kingsleyae
ENSTGUG00000013635	CMSS1	100	81.659	ENSPSIG00000003849	CMSS1	100	81.659	Pelodiscus_sinensis
ENSTGUG00000013635	CMSS1	97	58.407	ENSPMGG00000010286	cmss1	97	59.292	Periophthalmus_magnuspinnatus
ENSTGUG00000013635	CMSS1	100	65.502	ENSPEMG00000016384	Cmss1	82	65.502	Peromyscus_maniculatus_bairdii
ENSTGUG00000013635	CMSS1	89	53.431	ENSPMAG00000001146	cmss1	99	53.960	Petromyzon_marinus
ENSTGUG00000013635	CMSS1	100	69.869	ENSPCIG00000015656	CMSS1	87	69.869	Phascolarctos_cinereus
ENSTGUG00000013635	CMSS1	88	59.901	ENSPFOG00000016849	cmss1	71	59.901	Poecilia_formosa
ENSTGUG00000013635	CMSS1	88	59.406	ENSPLAG00000008323	cmss1	71	59.406	Poecilia_latipinna
ENSTGUG00000013635	CMSS1	88	59.901	ENSPMEG00000021020	cmss1	70	59.901	Poecilia_mexicana
ENSTGUG00000013635	CMSS1	88	59.406	ENSPREG00000007618	cmss1	69	59.406	Poecilia_reticulata
ENSTGUG00000013635	CMSS1	100	66.812	ENSPPYG00000013606	CMSS1	84	66.812	Pongo_abelii
ENSTGUG00000013635	CMSS1	100	65.939	ENSPCOG00000020035	CMSS1	88	65.939	Propithecus_coquereli
ENSTGUG00000013635	CMSS1	100	56.332	ENSPVAG00000017031	CMSS1	82	56.332	Pteropus_vampyrus
ENSTGUG00000013635	CMSS1	77	65.909	ENSPNYG00000013428	cmss1	65	65.909	Pundamilia_nyererei
ENSTGUG00000013635	CMSS1	99	56.522	ENSPNAG00000007912	cmss1	78	57.391	Pygocentrus_nattereri
ENSTGUG00000013635	CMSS1	100	66.087	ENSRNOG00000027888	Cmss1	89	66.087	Rattus_norvegicus
ENSTGUG00000013635	CMSS1	100	65.502	ENSRBIG00000037931	CMSS1	88	65.502	Rhinopithecus_bieti
ENSTGUG00000013635	CMSS1	100	65.502	ENSRROG00000042910	CMSS1	88	65.502	Rhinopithecus_roxellana
ENSTGUG00000013635	CMSS1	100	65.502	ENSSBOG00000030980	CMSS1	87	65.502	Saimiri_boliviensis_boliviensis
ENSTGUG00000013635	CMSS1	100	69.432	ENSSHAG00000009321	CMSS1	91	69.432	Sarcophilus_harrisii
ENSTGUG00000013635	CMSS1	99	62.174	ENSSFOG00015001509	cmss1	79	62.174	Scleropages_formosus
ENSTGUG00000013635	CMSS1	88	64.356	ENSSMAG00000001653	cmss1	74	62.162	Scophthalmus_maximus
ENSTGUG00000013635	CMSS1	100	60.776	ENSSDUG00000007719	cmss1	81	60.776	Seriola_dumerili
ENSTGUG00000013635	CMSS1	90	64.251	ENSSLDG00000012300	cmss1	76	59.563	Seriola_lalandi_dorsalis
ENSTGUG00000013635	CMSS1	100	55.459	ENSSARG00000003584	CMSS1	82	55.459	Sorex_araneus
ENSTGUG00000013635	CMSS1	99	79.204	ENSSPUG00000003865	CMSS1	100	79.204	Sphenodon_punctatus
ENSTGUG00000013635	CMSS1	90	64.078	ENSSPAG00000019182	cmss1	63	63.861	Stegastes_partitus
ENSTGUG00000013635	CMSS1	100	64.629	ENSSSCG00000011970	CMSS1	82	64.629	Sus_scrofa
ENSTGUG00000013635	CMSS1	88	62.376	ENSTRUG00000015265	cmss1	72	62.376	Takifugu_rubripes
ENSTGUG00000013635	CMSS1	88	55.446	ENSTNIG00000002880	cmss1	73	55.446	Tetraodon_nigroviridis
ENSTGUG00000013635	CMSS1	99	46.053	ENSTBEG00000016722	CMSS1	81	46.053	Tupaia_belangeri
ENSTGUG00000013635	CMSS1	100	62.882	ENSTTRG00000001562	CMSS1	82	62.882	Tursiops_truncatus
ENSTGUG00000013635	CMSS1	100	65.939	ENSUAMG00000024209	CMSS1	100	65.471	Ursus_americanus
ENSTGUG00000013635	CMSS1	100	65.939	ENSUMAG00000001983	CMSS1	88	65.939	Ursus_maritimus
ENSTGUG00000013635	CMSS1	99	52.193	ENSVPAG00000000263	CMSS1	57	67.500	Vicugna_pacos
ENSTGUG00000013635	CMSS1	100	65.939	ENSVVUG00000021647	-	93	65.939	Vulpes_vulpes
ENSTGUG00000013635	CMSS1	88	65.842	ENSVVUG00000007776	-	80	65.842	Vulpes_vulpes
ENSTGUG00000013635	CMSS1	95	64.220	ENSXETG00000011858	cmss1	78	64.220	Xenopus_tropicalis
ENSTGUG00000013635	CMSS1	91	60.577	ENSXCOG00000018724	cmss1	69	60.396	Xiphophorus_couchianus
ENSTGUG00000013635	CMSS1	91	60.577	ENSXMAG00000011243	cmss1	76	60.396	Xiphophorus_maculatus