EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000014378 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 1676 bases
Position: chrUn:93262944-93264619
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000014760	Exo_endo_phos	PF03372.23	1.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000014965	APEX1-201	705	-	ENSTGUP00000014760	234 (aa)	-	H0ZVW2

Gene Model

Click here to download ENSTGUG00000014378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000014378's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000014378	APEX1	100	60.169	ENSG00000100823	APEX1	74	60.169	Homo_sapiens
ENSTGUG00000014378	APEX1	100	57.447	ENSAPOG00000017002	apex1	77	57.447	Acanthochromis_polyacanthus
ENSTGUG00000014378	APEX1	100	59.746	ENSAMEG00000005418	APEX1	74	59.746	Ailuropoda_melanoleuca
ENSTGUG00000014378	APEX1	100	58.298	ENSACIG00000010653	apex1	79	58.298	Amphilophus_citrinellus
ENSTGUG00000014378	APEX1	100	57.447	ENSAOCG00000009649	apex1	76	57.447	Amphiprion_ocellaris
ENSTGUG00000014378	APEX1	100	57.447	ENSAPEG00000021453	apex1	76	57.447	Amphiprion_percula
ENSTGUG00000014378	APEX1	99	58.120	ENSATEG00000002883	apex1	74	58.120	Anabas_testudineus
ENSTGUG00000014378	APEX1	100	59.149	ENSACAG00000008099	APEX1	74	59.149	Anolis_carolinensis
ENSTGUG00000014378	APEX1	100	60.593	ENSANAG00000030117	APEX1	74	60.593	Aotus_nancymaae
ENSTGUG00000014378	APEX1	100	59.149	ENSACLG00000018441	apex1	76	59.149	Astatotilapia_calliptera
ENSTGUG00000014378	APEX1	100	57.872	ENSAMXG00000034699	apex1	75	57.872	Astyanax_mexicanus
ENSTGUG00000014378	APEX1	100	59.746	ENSBTAG00000002745	APEX1	74	59.746	Bos_taurus
ENSTGUG00000014378	APEX1	96	42.035	WBGene00001372	exo-3	78	42.035	Caenorhabditis_elegans
ENSTGUG00000014378	APEX1	100	61.017	ENSCJAG00000009726	APEX1	74	61.017	Callithrix_jacchus
ENSTGUG00000014378	APEX1	100	60.593	ENSCAFG00000032033	APEX1	74	60.593	Canis_familiaris
ENSTGUG00000014378	APEX1	100	60.593	ENSCAFG00020014377	-	74	60.593	Canis_lupus_dingo
ENSTGUG00000014378	APEX1	98	48.918	ENSCHIG00000014537	-	72	48.918	Capra_hircus
ENSTGUG00000014378	APEX1	100	59.746	ENSCHIG00000007298	-	74	59.746	Capra_hircus
ENSTGUG00000014378	APEX1	100	59.746	ENSTSYG00000034813	APEX1	74	59.746	Carlito_syrichta
ENSTGUG00000014378	APEX1	100	59.746	ENSCAPG00000016235	APEX1	91	59.746	Cavia_aperea
ENSTGUG00000014378	APEX1	100	59.746	ENSCPOG00000030909	APEX1	74	59.746	Cavia_porcellus
ENSTGUG00000014378	APEX1	100	61.017	ENSCCAG00000033056	-	74	61.017	Cebus_capucinus
ENSTGUG00000014378	APEX1	100	48.729	ENSCCAG00000031931	-	76	48.729	Cebus_capucinus
ENSTGUG00000014378	APEX1	100	60.169	ENSCATG00000015580	APEX1	74	60.169	Cercocebus_atys
ENSTGUG00000014378	APEX1	100	60.169	ENSCLAG00000001002	APEX1	74	60.169	Chinchilla_lanigera
ENSTGUG00000014378	APEX1	100	60.169	ENSCSAG00000016685	-	74	60.169	Chlorocebus_sabaeus
ENSTGUG00000014378	APEX1	100	60.169	ENSCSAG00000016670	-	74	60.169	Chlorocebus_sabaeus
ENSTGUG00000014378	APEX1	100	63.404	ENSCPBG00000009567	APEX1	74	63.404	Chrysemys_picta_bellii
ENSTGUG00000014378	APEX1	97	31.429	ENSCPBG00000016631	APEX2	57	31.317	Chrysemys_picta_bellii
ENSTGUG00000014378	APEX1	100	48.085	ENSCING00000008137	-	75	48.085	Ciona_intestinalis
ENSTGUG00000014378	APEX1	100	44.304	ENSCSAVG00000007144	-	92	44.304	Ciona_savignyi
ENSTGUG00000014378	APEX1	100	60.593	ENSCANG00000030726	APEX1	74	60.593	Colobus_angolensis_palliatus
ENSTGUG00000014378	APEX1	100	60.593	ENSCGRG00001017046	Apex1	74	60.593	Cricetulus_griseus_chok1gshd
ENSTGUG00000014378	APEX1	100	60.593	ENSCGRG00000008984	Apex1	74	60.593	Cricetulus_griseus_crigri
ENSTGUG00000014378	APEX1	100	57.872	ENSCSEG00000017499	apex1	76	57.872	Cynoglossus_semilaevis
ENSTGUG00000014378	APEX1	100	59.149	ENSCVAG00000022075	apex1	76	59.149	Cyprinodon_variegatus
ENSTGUG00000014378	APEX1	100	59.574	ENSDARG00000045843	apex1	76	59.574	Danio_rerio
ENSTGUG00000014378	APEX1	100	56.780	ENSDNOG00000042234	APEX1	70	56.780	Dasypus_novemcinctus
ENSTGUG00000014378	APEX1	100	58.898	ENSDORG00000001616	Apex1	74	58.898	Dipodomys_ordii
ENSTGUG00000014378	APEX1	100	61.017	ENSETEG00000004855	-	74	61.017	Echinops_telfairi
ENSTGUG00000014378	APEX1	100	55.508	ENSEBUG00000000622	-	91	55.508	Eptatretus_burgeri
ENSTGUG00000014378	APEX1	100	60.169	ENSEASG00005017489	APEX1	55	60.169	Equus_asinus_asinus
ENSTGUG00000014378	APEX1	100	60.169	ENSECAG00000022325	APEX1	61	60.169	Equus_caballus
ENSTGUG00000014378	APEX1	96	57.965	ENSEEUG00000012569	APEX1	78	57.965	Erinaceus_europaeus
ENSTGUG00000014378	APEX1	100	56.170	ENSELUG00000021706	apex1	75	56.170	Esox_lucius
ENSTGUG00000014378	APEX1	100	60.593	ENSFCAG00000030869	APEX1	74	60.593	Felis_catus
ENSTGUG00000014378	APEX1	100	61.017	ENSFDAG00000006120	APEX1	74	61.017	Fukomys_damarensis
ENSTGUG00000014378	APEX1	100	60.000	ENSFHEG00000009031	apex1	63	60.000	Fundulus_heteroclitus
ENSTGUG00000014378	APEX1	100	55.319	ENSGMOG00000007943	apex1	75	55.319	Gadus_morhua
ENSTGUG00000014378	APEX1	100	58.298	ENSGAFG00000005311	apex1	76	58.298	Gambusia_affinis
ENSTGUG00000014378	APEX1	100	56.170	ENSGACG00000019497	apex1	88	56.170	Gasterosteus_aculeatus
ENSTGUG00000014378	APEX1	100	63.830	ENSGAGG00000014999	APEX1	74	63.830	Gopherus_agassizii
ENSTGUG00000014378	APEX1	100	60.169	ENSGGOG00000002128	APEX1	74	60.169	Gorilla_gorilla
ENSTGUG00000014378	APEX1	100	58.723	ENSHBUG00000005894	apex1	76	58.723	Haplochromis_burtoni
ENSTGUG00000014378	APEX1	100	61.017	ENSHGLG00000002848	APEX1	74	61.017	Heterocephalus_glaber_female
ENSTGUG00000014378	APEX1	100	61.017	ENSHGLG00100017878	APEX1	74	61.017	Heterocephalus_glaber_male
ENSTGUG00000014378	APEX1	100	59.149	ENSHCOG00000009961	apex1	76	59.149	Hippocampus_comes
ENSTGUG00000014378	APEX1	100	60.426	ENSIPUG00000005799	apex1	76	60.426	Ictalurus_punctatus
ENSTGUG00000014378	APEX1	100	59.746	ENSSTOG00000010096	APEX1	74	59.746	Ictidomys_tridecemlineatus
ENSTGUG00000014378	APEX1	100	58.898	ENSJJAG00000012067	-	74	58.898	Jaculus_jaculus
ENSTGUG00000014378	APEX1	100	54.468	ENSJJAG00000020465	-	75	54.468	Jaculus_jaculus
ENSTGUG00000014378	APEX1	100	52.542	ENSJJAG00000003660	-	74	52.542	Jaculus_jaculus
ENSTGUG00000014378	APEX1	100	59.574	ENSKMAG00000021171	apex1	76	59.574	Kryptolebias_marmoratus
ENSTGUG00000014378	APEX1	100	56.596	ENSLBEG00000010248	apex1	76	56.596	Labrus_bergylta
ENSTGUG00000014378	APEX1	100	57.021	ENSLACG00000008617	APEX1	75	57.021	Latimeria_chalumnae
ENSTGUG00000014378	APEX1	100	60.000	ENSLOCG00000015516	apex1	74	60.000	Lepisosteus_oculatus
ENSTGUG00000014378	APEX1	100	59.746	ENSLAFG00000021872	APEX1	74	59.746	Loxodonta_africana
ENSTGUG00000014378	APEX1	100	60.169	ENSMFAG00000002565	APEX1	74	60.169	Macaca_fascicularis
ENSTGUG00000014378	APEX1	100	60.169	ENSMMUG00000048039	APEX1	74	60.169	Macaca_mulatta
ENSTGUG00000014378	APEX1	100	60.169	ENSMNEG00000036944	APEX1	74	60.169	Macaca_nemestrina
ENSTGUG00000014378	APEX1	100	60.169	ENSMLEG00000042125	APEX1	74	60.169	Mandrillus_leucophaeus
ENSTGUG00000014378	APEX1	100	57.872	ENSMAMG00000023526	apex1	76	57.872	Mastacembelus_armatus
ENSTGUG00000014378	APEX1	100	59.149	ENSMZEG00005014187	apex1	76	59.149	Maylandia_zebra
ENSTGUG00000014378	APEX1	100	60.593	ENSMAUG00000013994	Apex1	75	60.593	Mesocricetus_auratus
ENSTGUG00000014378	APEX1	100	59.322	ENSMICG00000043554	APEX1	74	59.322	Microcebus_murinus
ENSTGUG00000014378	APEX1	100	60.169	ENSMOCG00000013721	Apex1	74	60.169	Microtus_ochrogaster
ENSTGUG00000014378	APEX1	100	56.838	ENSMMOG00000010031	apex1	74	56.838	Mola_mola
ENSTGUG00000014378	APEX1	100	61.864	ENSMODG00000007125	APEX1	74	61.864	Monodelphis_domestica
ENSTGUG00000014378	APEX1	100	53.191	ENSMALG00000011699	apex1	62	52.340	Monopterus_albus
ENSTGUG00000014378	APEX1	99	60.851	MGP_CAROLIEiJ_G0019209	Apex1	74	60.851	Mus_caroli
ENSTGUG00000014378	APEX1	100	60.593	ENSMUSG00000035960	Apex1	74	60.593	Mus_musculus
ENSTGUG00000014378	APEX1	100	61.017	MGP_PahariEiJ_G0030232	Apex1	74	61.017	Mus_pahari
ENSTGUG00000014378	APEX1	100	60.593	MGP_SPRETEiJ_G0020101	Apex1	74	60.593	Mus_spretus
ENSTGUG00000014378	APEX1	100	60.593	ENSMLUG00000028957	APEX1	74	60.593	Myotis_lucifugus
ENSTGUG00000014378	APEX1	83	47.449	ENSNGAG00000021748	-	57	47.449	Nannospalax_galili
ENSTGUG00000014378	APEX1	100	59.746	ENSNGAG00000002725	-	74	59.746	Nannospalax_galili
ENSTGUG00000014378	APEX1	100	58.723	ENSNBRG00000005334	apex1	69	58.723	Neolamprologus_brichardi
ENSTGUG00000014378	APEX1	100	60.169	ENSNLEG00000010839	APEX1	75	60.169	Nomascus_leucogenys
ENSTGUG00000014378	APEX1	100	60.593	ENSMEUG00000014519	APEX1	75	60.593	Notamacropus_eugenii
ENSTGUG00000014378	APEX1	100	58.051	ENSOPRG00000014029	APEX1	74	58.051	Ochotona_princeps
ENSTGUG00000014378	APEX1	96	48.899	ENSODEG00000004777	-	76	48.899	Octodon_degus
ENSTGUG00000014378	APEX1	100	60.169	ENSODEG00000001703	-	74	60.169	Octodon_degus
ENSTGUG00000014378	APEX1	100	47.034	ENSODEG00000006583	-	73	47.034	Octodon_degus
ENSTGUG00000014378	APEX1	100	59.149	ENSONIG00000012089	apex1	76	59.149	Oreochromis_niloticus
ENSTGUG00000014378	APEX1	100	57.627	ENSOANG00000008836	APEX1	59	57.627	Ornithorhynchus_anatinus
ENSTGUG00000014378	APEX1	100	60.169	ENSOCUG00000005022	APEX1	74	60.169	Oryctolagus_cuniculus
ENSTGUG00000014378	APEX1	100	59.574	ENSORLG00000012378	apex1	76	59.574	Oryzias_latipes
ENSTGUG00000014378	APEX1	100	59.574	ENSORLG00020021371	apex1	76	59.574	Oryzias_latipes_hni
ENSTGUG00000014378	APEX1	100	59.574	ENSORLG00015020089	apex1	76	59.574	Oryzias_latipes_hsok
ENSTGUG00000014378	APEX1	100	59.574	ENSOMEG00000018876	apex1	76	59.574	Oryzias_melastigma
ENSTGUG00000014378	APEX1	100	59.746	ENSOGAG00000013335	-	74	59.746	Otolemur_garnettii
ENSTGUG00000014378	APEX1	100	53.975	ENSOGAG00000029355	-	76	53.975	Otolemur_garnettii
ENSTGUG00000014378	APEX1	100	59.746	ENSOARG00000019740	-	74	59.746	Ovis_aries
ENSTGUG00000014378	APEX1	96	57.965	ENSOARG00000001876	-	73	57.965	Ovis_aries
ENSTGUG00000014378	APEX1	98	50.216	ENSOARG00000014424	-	73	50.216	Ovis_aries
ENSTGUG00000014378	APEX1	100	60.593	ENSPPAG00000038760	APEX1	75	60.593	Pan_paniscus
ENSTGUG00000014378	APEX1	100	60.593	ENSPPRG00000011794	APEX1	74	60.593	Panthera_pardus
ENSTGUG00000014378	APEX1	100	60.593	ENSPTIG00000014829	APEX1	74	60.593	Panthera_tigris_altaica
ENSTGUG00000014378	APEX1	100	60.593	ENSPTRG00000006093	APEX1	75	60.593	Pan_troglodytes
ENSTGUG00000014378	APEX1	100	60.169	ENSPANG00000022757	APEX1	74	60.169	Papio_anubis
ENSTGUG00000014378	APEX1	100	56.596	ENSPKIG00000003504	apex1	75	56.596	Paramormyrops_kingsleyae
ENSTGUG00000014378	APEX1	100	56.170	ENSPMGG00000016596	apex1	71	56.170	Periophthalmus_magnuspinnatus
ENSTGUG00000014378	APEX1	100	61.017	ENSPEMG00000019097	Apex1	74	61.017	Peromyscus_maniculatus_bairdii
ENSTGUG00000014378	APEX1	100	60.169	ENSPMAG00000007275	-	80	60.169	Petromyzon_marinus
ENSTGUG00000014378	APEX1	96	30.797	ENSPCIG00000007633	APEX2	55	30.797	Phascolarctos_cinereus
ENSTGUG00000014378	APEX1	100	61.017	ENSPCIG00000023274	APEX1	74	61.017	Phascolarctos_cinereus
ENSTGUG00000014378	APEX1	100	58.723	ENSPFOG00000004178	apex1	76	58.723	Poecilia_formosa
ENSTGUG00000014378	APEX1	100	58.723	ENSPLAG00000012779	apex1	76	58.723	Poecilia_latipinna
ENSTGUG00000014378	APEX1	100	58.723	ENSPMEG00000019623	apex1	76	58.723	Poecilia_mexicana
ENSTGUG00000014378	APEX1	100	57.872	ENSPREG00000014298	apex1	76	57.872	Poecilia_reticulata
ENSTGUG00000014378	APEX1	100	60.593	ENSPPYG00000005565	APEX1	74	60.593	Pongo_abelii
ENSTGUG00000014378	APEX1	100	58.051	ENSPCAG00000010376	APEX1	74	58.051	Procavia_capensis
ENSTGUG00000014378	APEX1	100	58.898	ENSPCOG00000021564	APEX1	74	58.898	Propithecus_coquereli
ENSTGUG00000014378	APEX1	100	60.593	ENSPVAG00000010736	APEX1	74	60.593	Pteropus_vampyrus
ENSTGUG00000014378	APEX1	100	59.149	ENSPNYG00000023940	apex1	76	59.149	Pundamilia_nyererei
ENSTGUG00000014378	APEX1	90	57.547	ENSPNAG00000020897	apex1	70	57.895	Pygocentrus_nattereri
ENSTGUG00000014378	APEX1	100	60.169	ENSRNOG00000009663	Apex1	74	60.169	Rattus_norvegicus
ENSTGUG00000014378	APEX1	100	60.593	ENSRBIG00000038325	APEX1	73	60.593	Rhinopithecus_bieti
ENSTGUG00000014378	APEX1	100	61.017	ENSSBOG00000018921	-	74	61.017	Saimiri_boliviensis_boliviensis
ENSTGUG00000014378	APEX1	100	51.695	ENSSBOG00000031372	-	76	51.695	Saimiri_boliviensis_boliviensis
ENSTGUG00000014378	APEX1	100	61.441	ENSSHAG00000013524	APEX1	73	61.441	Sarcophilus_harrisii
ENSTGUG00000014378	APEX1	100	57.872	ENSSFOG00015001948	apex1	76	57.872	Scleropages_formosus
ENSTGUG00000014378	APEX1	100	57.021	ENSSMAG00000013348	apex1	75	57.021	Scophthalmus_maximus
ENSTGUG00000014378	APEX1	100	57.447	ENSSDUG00000016377	apex1	76	57.447	Seriola_dumerili
ENSTGUG00000014378	APEX1	100	57.872	ENSSLDG00000023005	apex1	76	57.872	Seriola_lalandi_dorsalis
ENSTGUG00000014378	APEX1	99	58.120	ENSSPUG00000000531	APEX1	79	58.120	Sphenodon_punctatus
ENSTGUG00000014378	APEX1	100	57.021	ENSSPAG00000000458	apex1	77	57.021	Stegastes_partitus
ENSTGUG00000014378	APEX1	100	59.746	ENSSSCG00000040060	-	74	59.746	Sus_scrofa
ENSTGUG00000014378	APEX1	74	43.094	ENSSSCG00000039705	-	69	43.094	Sus_scrofa
ENSTGUG00000014378	APEX1	100	56.838	ENSTRUG00000004268	apex1	71	56.838	Takifugu_rubripes
ENSTGUG00000014378	APEX1	100	57.872	ENSTNIG00000005778	apex1	76	57.872	Tetraodon_nigroviridis
ENSTGUG00000014378	APEX1	99	57.021	ENSTBEG00000006405	APEX1	74	57.021	Tupaia_belangeri
ENSTGUG00000014378	APEX1	100	58.723	ENSTTRG00000007860	APEX1	100	58.723	Tursiops_truncatus
ENSTGUG00000014378	APEX1	100	59.746	ENSUAMG00000010457	APEX1	74	59.746	Ursus_americanus
ENSTGUG00000014378	APEX1	100	59.746	ENSUMAG00000009178	APEX1	74	59.746	Ursus_maritimus
ENSTGUG00000014378	APEX1	100	55.319	ENSVPAG00000005083	APEX1	100	55.319	Vicugna_pacos
ENSTGUG00000014378	APEX1	100	60.169	ENSVVUG00000009010	APEX1	74	60.169	Vulpes_vulpes
ENSTGUG00000014378	APEX1	100	54.468	ENSXETG00000024773	apex1	74	54.468	Xenopus_tropicalis
ENSTGUG00000014378	APEX1	100	58.298	ENSXCOG00000015233	apex1	76	58.298	Xiphophorus_couchianus
ENSTGUG00000014378	APEX1	100	58.298	ENSXMAG00000006195	apex1	76	58.298	Xiphophorus_maculatus