EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000014475 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 22371 bases
Position: chrUn:34544871-34567241
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000014902	ResIII	PF04851.15	9.1e-22	1	2
ENSTGUP00000014902	ResIII	PF04851.15	9.1e-22	2	2
ENSTGUP00000014902	DEAD	PF00270.29	8.9e-46	1	2
ENSTGUP00000014902	DEAD	PF00270.29	8.9e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000015116	-	4878	-	ENSTGUP00000014902	1626 (aa)	-	H0ZWA3

Gene Model

Click here to download ENSTGUG00000014475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000014475's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000014475	-	67	35.072	ENSTGUG00000006172	HFM1	82	35.072
ENSTGUG00000014475	-	83	41.989	ENSTGUG00000012262	ASCC3	77	45.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000014475	-	100	87.975	ENSG00000144028	SNRNP200	99	87.975	Homo_sapiens
ENSTGUG00000014475	-	100	82.331	ENSAPOG00000010223	snrnp200	99	82.331	Acanthochromis_polyacanthus
ENSTGUG00000014475	-	100	88.037	ENSAMEG00000008996	SNRNP200	99	88.037	Ailuropoda_melanoleuca
ENSTGUG00000014475	-	98	81.870	ENSACIG00000001764	snrnp200	96	81.944	Amphilophus_citrinellus
ENSTGUG00000014475	-	100	82.209	ENSAOCG00000024593	snrnp200	99	82.209	Amphiprion_ocellaris
ENSTGUG00000014475	-	98	81.642	ENSAPEG00000012554	snrnp200	98	81.642	Amphiprion_percula
ENSTGUG00000014475	-	100	82.209	ENSATEG00000022522	snrnp200	99	82.209	Anabas_testudineus
ENSTGUG00000014475	-	100	89.264	ENSAPLG00000004313	SNRNP200	99	89.264	Anas_platyrhynchos
ENSTGUG00000014475	-	100	88.037	ENSACAG00000000434	SNRNP200	98	88.037	Anolis_carolinensis
ENSTGUG00000014475	-	100	82.906	ENSANAG00000036625	SNRNP200	99	82.906	Aotus_nancymaae
ENSTGUG00000014475	-	100	82.270	ENSACLG00000011188	snrnp200	99	82.342	Astatotilapia_calliptera
ENSTGUG00000014475	-	100	81.902	ENSAMXG00000005684	snrnp200	99	81.902	Astyanax_mexicanus
ENSTGUG00000014475	-	100	87.730	ENSBTAG00000000848	SNRNP200	99	87.730	Bos_taurus
ENSTGUG00000014475	-	100	87.975	ENSCJAG00000007514	SNRNP200	99	87.975	Callithrix_jacchus
ENSTGUG00000014475	-	100	87.049	ENSCAFG00020019979	SNRNP200	99	87.234	Canis_lupus_dingo
ENSTGUG00000014475	-	100	87.853	ENSCHIG00000020611	SNRNP200	99	87.853	Capra_hircus
ENSTGUG00000014475	-	100	88.037	ENSTSYG00000010467	SNRNP200	99	88.037	Carlito_syrichta
ENSTGUG00000014475	-	100	87.645	ENSCAPG00000017234	SNRNP200	99	87.645	Cavia_aperea
ENSTGUG00000014475	-	100	87.914	ENSCPOG00000006776	SNRNP200	99	87.914	Cavia_porcellus
ENSTGUG00000014475	-	100	87.975	ENSCCAG00000033962	SNRNP200	99	87.975	Cebus_capucinus
ENSTGUG00000014475	-	100	87.975	ENSCATG00000015790	SNRNP200	99	87.975	Cercocebus_atys
ENSTGUG00000014475	-	100	87.914	ENSCLAG00000004116	SNRNP200	99	87.914	Chinchilla_lanigera
ENSTGUG00000014475	-	100	87.975	ENSCSAG00000017369	SNRNP200	99	87.975	Chlorocebus_sabaeus
ENSTGUG00000014475	-	70	100.000	ENSCHOG00000012981	-	56	100.000	Choloepus_hoffmanni
ENSTGUG00000014475	-	100	87.998	ENSCPBG00000022571	SNRNP200	99	87.998	Chrysemys_picta_bellii
ENSTGUG00000014475	-	100	68.019	ENSCING00000005082	-	99	68.456	Ciona_intestinalis
ENSTGUG00000014475	-	100	81.824	ENSCANG00000033932	SNRNP200	99	87.088	Colobus_angolensis_palliatus
ENSTGUG00000014475	-	100	87.914	ENSCGRG00001022610	Snrnp200	99	87.914	Cricetulus_griseus_chok1gshd
ENSTGUG00000014475	-	100	87.485	ENSCGRG00000016472	Snrnp200	99	87.485	Cricetulus_griseus_crigri
ENSTGUG00000014475	-	100	81.147	ENSCSEG00000016399	snrnp200	99	81.147	Cynoglossus_semilaevis
ENSTGUG00000014475	-	100	75.767	ENSCVAG00000017631	snrnp200	99	75.951	Cyprinodon_variegatus
ENSTGUG00000014475	-	100	81.656	ENSDARG00000077536	snrnp200	99	81.656	Danio_rerio
ENSTGUG00000014475	-	100	86.196	ENSDNOG00000011227	SNRNP200	99	86.196	Dasypus_novemcinctus
ENSTGUG00000014475	-	100	84.691	ENSDORG00000005861	Snrnp200	99	84.691	Dipodomys_ordii
ENSTGUG00000014475	-	100	65.697	FBgn0263599	l(3)72Ab	99	65.697	Drosophila_melanogaster
ENSTGUG00000014475	-	93	84.635	ENSETEG00000000162	SNRNP200	68	84.635	Echinops_telfairi
ENSTGUG00000014475	-	79	72.525	ENSEBUG00000016524	snrnp200	95	72.525	Eptatretus_burgeri
ENSTGUG00000014475	-	100	86.577	ENSEASG00005001884	SNRNP200	99	86.394	Equus_asinus_asinus
ENSTGUG00000014475	-	100	91.565	ENSECAG00000019675	SNRNP200	97	91.565	Equus_caballus
ENSTGUG00000014475	-	87	87.350	ENSEEUG00000012178	SNRNP200	89	87.350	Erinaceus_europaeus
ENSTGUG00000014475	-	100	82.036	ENSELUG00000018948	snrnp200	99	82.036	Esox_lucius
ENSTGUG00000014475	-	100	88.037	ENSFCAG00000010699	SNRNP200	99	88.037	Felis_catus
ENSTGUG00000014475	-	92	92.857	ENSFALG00000001368	-	94	92.857	Ficedula_albicollis
ENSTGUG00000014475	-	100	87.853	ENSFDAG00000004683	SNRNP200	99	87.853	Fukomys_damarensis
ENSTGUG00000014475	-	100	79.448	ENSFHEG00000003786	snrnp200	99	79.448	Fundulus_heteroclitus
ENSTGUG00000014475	-	100	81.066	ENSGMOG00000004881	snrnp200	99	81.005	Gadus_morhua
ENSTGUG00000014475	-	100	79.632	ENSGAFG00000010807	snrnp200	99	79.632	Gambusia_affinis
ENSTGUG00000014475	-	100	81.996	ENSGACG00000011474	snrnp200	98	82.058	Gasterosteus_aculeatus
ENSTGUG00000014475	-	94	87.139	ENSGAGG00000016069	SNRNP200	98	87.139	Gopherus_agassizii
ENSTGUG00000014475	-	100	87.975	ENSGGOG00000005174	SNRNP200	95	97.917	Gorilla_gorilla
ENSTGUG00000014475	-	98	79.674	ENSHBUG00000011322	snrnp200	97	79.749	Haplochromis_burtoni
ENSTGUG00000014475	-	100	87.914	ENSHGLG00000006654	SNRNP200	99	87.914	Heterocephalus_glaber_female
ENSTGUG00000014475	-	100	87.914	ENSHGLG00100018594	SNRNP200	99	87.914	Heterocephalus_glaber_male
ENSTGUG00000014475	-	100	87.975	ENSSTOG00000016351	SNRNP200	99	87.975	Ictidomys_tridecemlineatus
ENSTGUG00000014475	-	100	87.791	ENSJJAG00000023659	Snrnp200	99	87.791	Jaculus_jaculus
ENSTGUG00000014475	-	100	78.963	ENSKMAG00000003665	snrnp200	99	78.963	Kryptolebias_marmoratus
ENSTGUG00000014475	-	100	82.331	ENSLBEG00000021585	snrnp200	99	82.331	Labrus_bergylta
ENSTGUG00000014475	-	77	85.532	ENSLACG00000000226	SNRNP200	99	85.532	Latimeria_chalumnae
ENSTGUG00000014475	-	100	83.231	ENSLOCG00000015198	snrnp200	99	83.476	Lepisosteus_oculatus
ENSTGUG00000014475	-	100	87.669	ENSLAFG00000015626	SNRNP200	99	87.669	Loxodonta_africana
ENSTGUG00000014475	-	100	88.037	ENSMFAG00000040174	SNRNP200	99	97.384	Macaca_fascicularis
ENSTGUG00000014475	-	100	88.037	ENSMMUG00000023261	SNRNP200	99	88.037	Macaca_mulatta
ENSTGUG00000014475	-	100	87.975	ENSMNEG00000032398	SNRNP200	99	87.975	Macaca_nemestrina
ENSTGUG00000014475	-	100	87.975	ENSMLEG00000019083	SNRNP200	99	97.384	Mandrillus_leucophaeus
ENSTGUG00000014475	-	100	82.025	ENSMAMG00000007851	snrnp200	99	82.025	Mastacembelus_armatus
ENSTGUG00000014475	-	98	79.674	ENSMZEG00005010787	snrnp200	97	79.749	Maylandia_zebra
ENSTGUG00000014475	-	97	88.776	ENSMGAG00000001831	SNRNP200	99	88.804	Meleagris_gallopavo
ENSTGUG00000014475	-	100	87.914	ENSMAUG00000011825	Snrnp200	99	87.914	Mesocricetus_auratus
ENSTGUG00000014475	-	100	87.914	ENSMICG00000004710	SNRNP200	98	97.183	Microcebus_murinus
ENSTGUG00000014475	-	100	86.503	ENSMOCG00000011814	Snrnp200	99	86.503	Microtus_ochrogaster
ENSTGUG00000014475	-	100	81.595	ENSMMOG00000014167	snrnp200	99	81.595	Mola_mola
ENSTGUG00000014475	-	100	87.546	ENSMODG00000008475	SNRNP200	99	87.546	Monodelphis_domestica
ENSTGUG00000014475	-	100	82.270	ENSMALG00000001973	snrnp200	99	82.270	Monopterus_albus
ENSTGUG00000014475	-	100	87.730	MGP_CAROLIEiJ_G0024250	Snrnp200	99	87.730	Mus_caroli
ENSTGUG00000014475	-	100	87.730	ENSMUSG00000003660	Snrnp200	99	87.730	Mus_musculus
ENSTGUG00000014475	-	100	87.791	MGP_PahariEiJ_G0025695	Snrnp200	99	87.791	Mus_pahari
ENSTGUG00000014475	-	100	87.730	MGP_SPRETEiJ_G0025170	Snrnp200	98	89.602	Mus_spretus
ENSTGUG00000014475	-	100	87.975	ENSMPUG00000008949	SNRNP200	99	87.975	Mustela_putorius_furo
ENSTGUG00000014475	-	100	84.233	ENSMLUG00000027511	-	99	84.233	Myotis_lucifugus
ENSTGUG00000014475	-	100	87.385	ENSMLUG00000010493	SNRNP200	99	87.385	Myotis_lucifugus
ENSTGUG00000014475	-	100	87.975	ENSNGAG00000021993	Snrnp200	99	87.975	Nannospalax_galili
ENSTGUG00000014475	-	89	80.923	ENSNBRG00000017960	snrnp200	96	80.992	Neolamprologus_brichardi
ENSTGUG00000014475	-	99	82.987	ENSNLEG00000000025	SNRNP200	99	82.987	Nomascus_leucogenys
ENSTGUG00000014475	-	99	86.172	ENSMEUG00000010532	SNRNP200	70	86.172	Notamacropus_eugenii
ENSTGUG00000014475	-	96	85.879	ENSOPRG00000015464	SNRNP200	96	85.933	Ochotona_princeps
ENSTGUG00000014475	-	100	87.853	ENSODEG00000008366	SNRNP200	99	87.853	Octodon_degus
ENSTGUG00000014475	-	100	82.270	ENSONIG00000010714	snrnp200	98	82.342	Oreochromis_niloticus
ENSTGUG00000014475	-	100	87.975	ENSOCUG00000009864	SNRNP200	99	87.975	Oryctolagus_cuniculus
ENSTGUG00000014475	-	100	82.086	ENSORLG00000012286	snrnp200	99	82.086	Oryzias_latipes
ENSTGUG00000014475	-	100	82.147	ENSORLG00020004648	snrnp200	99	82.147	Oryzias_latipes_hni
ENSTGUG00000014475	-	100	82.086	ENSORLG00015019114	snrnp200	99	82.086	Oryzias_latipes_hsok
ENSTGUG00000014475	-	100	82.209	ENSOMEG00000011834	snrnp200	99	82.209	Oryzias_melastigma
ENSTGUG00000014475	-	100	88.037	ENSOGAG00000006879	SNRNP200	99	88.037	Otolemur_garnettii
ENSTGUG00000014475	-	100	87.308	ENSOARG00000013949	SNRNP200	99	87.308	Ovis_aries
ENSTGUG00000014475	-	100	87.975	ENSPPAG00000041559	SNRNP200	99	87.975	Pan_paniscus
ENSTGUG00000014475	-	100	88.037	ENSPPRG00000004435	SNRNP200	99	88.037	Panthera_pardus
ENSTGUG00000014475	-	100	87.546	ENSPTIG00000006380	SNRNP200	99	87.546	Panthera_tigris_altaica
ENSTGUG00000014475	-	100	87.975	ENSPTRG00000012230	SNRNP200	91	97.640	Pan_troglodytes
ENSTGUG00000014475	-	100	87.914	ENSPANG00000006017	SNRNP200	99	87.914	Papio_anubis
ENSTGUG00000014475	-	100	82.833	ENSPKIG00000014762	snrnp200	99	82.833	Paramormyrops_kingsleyae
ENSTGUG00000014475	-	100	86.818	ENSPSIG00000008580	SNRNP200	99	86.818	Pelodiscus_sinensis
ENSTGUG00000014475	-	53	85.491	ENSPEMG00000020700	-	96	85.491	Peromyscus_maniculatus_bairdii
ENSTGUG00000014475	-	100	87.607	ENSPCIG00000023050	SNRNP200	99	87.607	Phascolarctos_cinereus
ENSTGUG00000014475	-	100	82.587	ENSPFOG00000015110	snrnp200	99	82.587	Poecilia_formosa
ENSTGUG00000014475	-	98	82.309	ENSPLAG00000006711	snrnp200	99	82.309	Poecilia_latipinna
ENSTGUG00000014475	-	98	82.371	ENSPMEG00000021166	snrnp200	99	82.371	Poecilia_mexicana
ENSTGUG00000014475	-	100	82.515	ENSPREG00000008875	snrnp200	99	82.515	Poecilia_reticulata
ENSTGUG00000014475	-	100	87.975	ENSPPYG00000012068	SNRNP200	99	87.975	Pongo_abelii
ENSTGUG00000014475	-	97	88.095	ENSPCAG00000008536	SNRNP200	84	100.000	Procavia_capensis
ENSTGUG00000014475	-	100	87.975	ENSPCOG00000024608	SNRNP200	99	87.975	Propithecus_coquereli
ENSTGUG00000014475	-	94	93.333	ENSPVAG00000005860	SNRNP200	90	93.333	Pteropus_vampyrus
ENSTGUG00000014475	-	100	76.933	ENSPNYG00000017476	snrnp200	99	77.008	Pundamilia_nyererei
ENSTGUG00000014475	-	100	76.319	ENSPNAG00000010998	snrnp200	99	76.319	Pygocentrus_nattereri
ENSTGUG00000014475	-	100	87.914	ENSRNOG00000012157	Snrnp200	99	87.914	Rattus_norvegicus
ENSTGUG00000014475	-	100	87.975	ENSRBIG00000044690	-	90	97.947	Rhinopithecus_bieti
ENSTGUG00000014475	-	100	87.975	ENSRROG00000037952	-	99	87.975	Rhinopithecus_roxellana
ENSTGUG00000014475	-	100	87.975	ENSSBOG00000035471	SNRNP200	97	97.640	Saimiri_boliviensis_boliviensis
ENSTGUG00000014475	-	97	87.119	ENSSHAG00000000758	SNRNP200	99	87.142	Sarcophilus_harrisii
ENSTGUG00000014475	-	100	83.262	ENSSFOG00015018826	snrnp200	99	83.262	Scleropages_formosus
ENSTGUG00000014475	-	100	82.209	ENSSMAG00000005463	snrnp200	99	82.209	Scophthalmus_maximus
ENSTGUG00000014475	-	100	82.331	ENSSDUG00000021410	snrnp200	99	82.331	Seriola_dumerili
ENSTGUG00000014475	-	100	82.454	ENSSLDG00000010884	snrnp200	99	82.454	Seriola_lalandi_dorsalis
ENSTGUG00000014475	-	95	89.415	ENSSARG00000010728	SNRNP200	93	89.385	Sorex_araneus
ENSTGUG00000014475	-	100	87.669	ENSSPUG00000003726	-	99	87.669	Sphenodon_punctatus
ENSTGUG00000014475	-	100	82.331	ENSSPAG00000001842	snrnp200	99	82.331	Stegastes_partitus
ENSTGUG00000014475	-	100	88.037	ENSSSCG00000008127	SNRNP200	99	88.037	Sus_scrofa
ENSTGUG00000014475	-	100	82.147	ENSTRUG00000001307	snrnp200	98	82.147	Takifugu_rubripes
ENSTGUG00000014475	-	100	77.276	ENSTNIG00000004320	snrnp200	95	73.133	Tetraodon_nigroviridis
ENSTGUG00000014475	-	100	87.607	ENSTTRG00000004983	SNRNP200	99	87.607	Tursiops_truncatus
ENSTGUG00000014475	-	84	79.588	ENSUAMG00000008395	-	93	79.490	Ursus_americanus
ENSTGUG00000014475	-	100	88.037	ENSUMAG00000012385	SNRNP200	99	88.037	Ursus_maritimus
ENSTGUG00000014475	-	91	100.000	ENSVPAG00000006434	SNRNP200	52	100.000	Vicugna_pacos
ENSTGUG00000014475	-	100	87.768	ENSVVUG00000026247	SNRNP200	99	87.768	Vulpes_vulpes
ENSTGUG00000014475	-	100	85.583	ENSXETG00000001243	snrnp200	99	85.583	Xenopus_tropicalis
ENSTGUG00000014475	-	98	82.309	ENSXMAG00000002058	snrnp200	96	82.309	Xiphophorus_maculatus