EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000015488 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 12935 bases
Position: chrUn:73215460-73228394
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000015861	ResIII	PF04851.15	3.2e-10	1	1
ENSTGUP00000015861	BRK	PF07533.16	4.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000016141	-	2547	-	ENSTGUP00000015861	849 (aa)	-	H0ZZ08

Gene Model

Click here to download ENSTGUG00000015488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000015488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000015488	-	55	33.200	ENSTGUG00000011880	-	52	33.200
ENSTGUG00000015488	-	53	32.983	ENSTGUG00000008233	RAD54L	63	32.495
ENSTGUG00000015488	-	98	78.410	ENSTGUG00000005460	SMARCA2	54	78.512
ENSTGUG00000015488	-	67	40.555	ENSTGUG00000002408	SMARCA5	53	40.555
ENSTGUG00000015488	-	56	31.376	ENSTGUG00000000524	ERCC6L2	77	31.376
ENSTGUG00000015488	-	54	43.601	ENSTGUG00000013392	-	50	43.384
ENSTGUG00000015488	-	60	45.049	ENSTGUG00000003899	-	50	45.049
ENSTGUG00000015488	-	55	48.000	ENSTGUG00000007157	HELLS	55	48.000
ENSTGUG00000015488	-	58	34.566	ENSTGUG00000003127	SMARCAD1	67	34.566

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000015488	-	92	99.145	ENSG00000127616	SMARCA4	97	100.000	Homo_sapiens
ENSTGUG00000015488	-	99	81.037	ENSAPOG00000003509	smarca4a	66	80.448	Acanthochromis_polyacanthus
ENSTGUG00000015488	-	99	84.570	ENSAPOG00000004542	SMARCA4	60	84.179	Acanthochromis_polyacanthus
ENSTGUG00000015488	-	93	96.246	ENSAMEG00000010868	SMARCA4	51	89.671	Ailuropoda_melanoleuca
ENSTGUG00000015488	-	98	84.423	ENSACIG00000003035	-	56	84.652	Amphilophus_citrinellus
ENSTGUG00000015488	-	98	83.493	ENSACIG00000021550	smarca4a	51	83.630	Amphilophus_citrinellus
ENSTGUG00000015488	-	98	84.423	ENSAOCG00000009450	-	54	84.534	Amphiprion_ocellaris
ENSTGUG00000015488	-	98	83.612	ENSAOCG00000019167	smarca4a	60	83.749	Amphiprion_ocellaris
ENSTGUG00000015488	-	98	83.732	ENSAPEG00000015559	smarca4a	60	83.867	Amphiprion_percula
ENSTGUG00000015488	-	99	84.570	ENSAPEG00000023108	-	50	84.552	Amphiprion_percula
ENSTGUG00000015488	-	98	84.091	ENSATEG00000011524	smarca4a	52	84.223	Anabas_testudineus
ENSTGUG00000015488	-	98	84.689	ENSATEG00000001094	-	58	81.020	Anabas_testudineus
ENSTGUG00000015488	-	100	89.591	ENSANAG00000036991	SMARCA4	52	90.780	Aotus_nancymaae
ENSTGUG00000015488	-	98	84.129	ENSACLG00000000163	smarca4a	50	89.922	Astatotilapia_calliptera
ENSTGUG00000015488	-	99	84.452	ENSACLG00000008638	-	56	84.534	Astatotilapia_calliptera
ENSTGUG00000015488	-	98	84.899	ENSAMXG00000011238	-	61	85.124	Astyanax_mexicanus
ENSTGUG00000015488	-	98	81.213	ENSAMXG00000021023	smarca4a	54	81.368	Astyanax_mexicanus
ENSTGUG00000015488	-	99	90.403	ENSBTAG00000019220	SMARCA4	53	90.403	Bos_taurus
ENSTGUG00000015488	-	100	89.591	ENSCJAG00000005936	SMARCA4	51	89.591	Callithrix_jacchus
ENSTGUG00000015488	-	99	90.403	ENSCAFG00000017584	SMARCA4	52	90.403	Canis_familiaris
ENSTGUG00000015488	-	93	97.521	ENSCAFG00020024620	SMARCA4	53	89.708	Canis_lupus_dingo
ENSTGUG00000015488	-	93	92.248	ENSCHIG00000015318	SMARCA4	52	82.033	Capra_hircus
ENSTGUG00000015488	-	94	95.821	ENSTSYG00000012966	SMARCA4	53	90.284	Carlito_syrichta
ENSTGUG00000015488	-	99	87.796	ENSCAPG00000015932	SMARCA4	59	88.849	Cavia_aperea
ENSTGUG00000015488	-	99	90.403	ENSCPOG00000015549	SMARCA4	52	90.403	Cavia_porcellus
ENSTGUG00000015488	-	94	92.248	ENSCCAG00000031660	SMARCA4	51	84.798	Cebus_capucinus
ENSTGUG00000015488	-	92	99.153	ENSCATG00000029530	SMARCA4	52	90.284	Cercocebus_atys
ENSTGUG00000015488	-	100	89.825	ENSCLAG00000011946	SMARCA4	53	90.521	Chinchilla_lanigera
ENSTGUG00000015488	-	99	90.273	ENSCPBG00000009994	SMARCA4	52	90.273	Chrysemys_picta_bellii
ENSTGUG00000015488	-	92	99.145	ENSCANG00000036013	SMARCA4	52	90.284	Colobus_angolensis_palliatus
ENSTGUG00000015488	-	100	89.474	ENSCGRG00001016732	Smarca4	52	90.166	Cricetulus_griseus_chok1gshd
ENSTGUG00000015488	-	100	89.474	ENSCGRG00000017242	Smarca4	53	90.166	Cricetulus_griseus_crigri
ENSTGUG00000015488	-	98	84.091	ENSCSEG00000014771	smarca4a	52	84.223	Cynoglossus_semilaevis
ENSTGUG00000015488	-	59	74.751	ENSCSEG00000009723	-	71	74.751	Cynoglossus_semilaevis
ENSTGUG00000015488	-	98	84.780	ENSCVAG00000003018	-	53	85.006	Cyprinodon_variegatus
ENSTGUG00000015488	-	98	84.569	ENSDARG00000104339	SMARCA4	54	84.834	Danio_rerio
ENSTGUG00000015488	-	98	84.091	ENSDARG00000077226	smarca4a	52	84.460	Danio_rerio
ENSTGUG00000015488	-	95	94.567	ENSDNOG00000048847	SMARCA4	63	97.063	Dasypus_novemcinctus
ENSTGUG00000015488	-	94	92.248	ENSDORG00000002544	Smarca4	54	92.248	Dipodomys_ordii
ENSTGUG00000015488	-	100	89.357	ENSEASG00005006167	SMARCA4	52	89.357	Equus_asinus_asinus
ENSTGUG00000015488	-	98	90.084	ENSECAG00000008334	SMARCA4	52	90.166	Equus_caballus
ENSTGUG00000015488	-	92	88.300	ENSELUG00000023232	-	54	77.700	Esox_lucius
ENSTGUG00000015488	-	99	82.807	ENSELUG00000010247	smarca4a	53	83.392	Esox_lucius
ENSTGUG00000015488	-	92	99.145	ENSFCAG00000004894	SMARCA4	52	90.403	Felis_catus
ENSTGUG00000015488	-	94	96.263	ENSFALG00000004208	SMARCA4	50	96.263	Ficedula_albicollis
ENSTGUG00000015488	-	99	90.521	ENSFDAG00000012237	SMARCA4	56	90.521	Fukomys_damarensis
ENSTGUG00000015488	-	99	85.041	ENSFHEG00000007902	-	50	85.024	Fundulus_heteroclitus
ENSTGUG00000015488	-	98	84.148	ENSFHEG00000010182	smarca4a	59	83.432	Fundulus_heteroclitus
ENSTGUG00000015488	-	85	95.447	ENSGALG00000047145	SMARCA4	61	95.447	Gallus_gallus
ENSTGUG00000015488	-	98	84.267	ENSGAFG00000014900	smarca4a	58	84.223	Gambusia_affinis
ENSTGUG00000015488	-	99	80.919	ENSGAFG00000008827	-	53	81.014	Gambusia_affinis
ENSTGUG00000015488	-	99	84.716	ENSGACG00000016033	-	51	84.716	Gasterosteus_aculeatus
ENSTGUG00000015488	-	99	90.154	ENSGAGG00000016757	SMARCA4	52	90.154	Gopherus_agassizii
ENSTGUG00000015488	-	92	99.153	ENSGGOG00000009882	SMARCA4	52	90.284	Gorilla_gorilla
ENSTGUG00000015488	-	99	83.958	ENSHBUG00000021172	smarca4a	52	84.579	Haplochromis_burtoni
ENSTGUG00000015488	-	98	84.304	ENSHBUG00000005447	-	55	84.534	Haplochromis_burtoni
ENSTGUG00000015488	-	100	89.708	ENSHGLG00000010519	SMARCA4	52	90.403	Heterocephalus_glaber_female
ENSTGUG00000015488	-	100	89.148	ENSHGLG00100013774	SMARCA4	53	89.835	Heterocephalus_glaber_male
ENSTGUG00000015488	-	98	83.612	ENSHCOG00000009510	smarca4a	50	89.147	Hippocampus_comes
ENSTGUG00000015488	-	98	84.211	ENSIPUG00000006107	smarca4a	55	82.800	Ictalurus_punctatus
ENSTGUG00000015488	-	99	84.570	ENSIPUG00000016346	-	52	84.788	Ictalurus_punctatus
ENSTGUG00000015488	-	100	89.708	ENSSTOG00000007939	SMARCA4	52	90.403	Ictidomys_tridecemlineatus
ENSTGUG00000015488	-	100	89.591	ENSJJAG00000012877	Smarca4	52	89.591	Jaculus_jaculus
ENSTGUG00000015488	-	98	84.211	ENSKMAG00000011931	smarca4a	53	84.579	Kryptolebias_marmoratus
ENSTGUG00000015488	-	99	85.159	ENSKMAG00000019518	-	54	85.242	Kryptolebias_marmoratus
ENSTGUG00000015488	-	92	89.147	ENSLBEG00000017383	smarca4a	51	89.147	Labrus_bergylta
ENSTGUG00000015488	-	58	91.473	ENSLACG00000015309	SMARCA4	65	80.812	Latimeria_chalumnae
ENSTGUG00000015488	-	98	85.936	ENSLOCG00000007820	smarca4a	53	86.137	Lepisosteus_oculatus
ENSTGUG00000015488	-	99	90.403	ENSLAFG00000001433	SMARCA4	53	90.403	Loxodonta_africana
ENSTGUG00000015488	-	92	99.145	ENSMFAG00000032146	SMARCA4	52	90.284	Macaca_fascicularis
ENSTGUG00000015488	-	92	99.145	ENSMMUG00000012042	SMARCA4	59	95.686	Macaca_mulatta
ENSTGUG00000015488	-	92	99.145	ENSMNEG00000028512	SMARCA4	52	90.284	Macaca_nemestrina
ENSTGUG00000015488	-	92	99.153	ENSMLEG00000034976	SMARCA4	52	90.284	Mandrillus_leucophaeus
ENSTGUG00000015488	-	98	83.971	ENSMAMG00000009256	smarca4a	53	84.104	Mastacembelus_armatus
ENSTGUG00000015488	-	99	84.570	ENSMAMG00000002841	-	54	84.652	Mastacembelus_armatus
ENSTGUG00000015488	-	98	84.304	ENSMZEG00005023861	-	53	84.442	Maylandia_zebra
ENSTGUG00000015488	-	100	89.474	ENSMAUG00000020731	Smarca4	52	90.166	Mesocricetus_auratus
ENSTGUG00000015488	-	100	89.708	ENSMICG00000009806	SMARCA4	52	90.403	Microcebus_murinus
ENSTGUG00000015488	-	100	89.240	ENSMOCG00000022209	Smarca4	52	89.929	Microtus_ochrogaster
ENSTGUG00000015488	-	98	80.262	ENSMMOG00000008466	-	53	80.638	Mola_mola
ENSTGUG00000015488	-	98	82.297	ENSMMOG00000007571	smarca4a	51	89.922	Mola_mola
ENSTGUG00000015488	-	99	89.882	ENSMODG00000006287	SMARCA4	52	89.882	Monodelphis_domestica
ENSTGUG00000015488	-	98	83.948	ENSMALG00000021534	-	61	84.298	Monopterus_albus
ENSTGUG00000015488	-	92	89.147	ENSMALG00000003388	smarca4a	52	83.749	Monopterus_albus
ENSTGUG00000015488	-	100	89.474	MGP_CAROLIEiJ_G0031879	Smarca4	68	89.474	Mus_caroli
ENSTGUG00000015488	-	100	89.474	ENSMUSG00000032187	Smarca4	67	89.474	Mus_musculus
ENSTGUG00000015488	-	100	89.474	MGP_PahariEiJ_G0014745	Smarca4	68	89.474	Mus_pahari
ENSTGUG00000015488	-	100	89.474	MGP_SPRETEiJ_G0033003	Smarca4	68	89.474	Mus_spretus
ENSTGUG00000015488	-	99	90.284	ENSMPUG00000005711	SMARCA4	52	90.284	Mustela_putorius_furo
ENSTGUG00000015488	-	99	90.403	ENSMLUG00000004491	-	52	90.403	Myotis_lucifugus
ENSTGUG00000015488	-	100	89.708	ENSNGAG00000021852	Smarca4	52	90.403	Nannospalax_galili
ENSTGUG00000015488	-	98	84.304	ENSNBRG00000018865	-	60	84.534	Neolamprologus_brichardi
ENSTGUG00000015488	-	98	83.472	ENSNBRG00000011457	smarca4a	54	83.825	Neolamprologus_brichardi
ENSTGUG00000015488	-	92	97.252	ENSNLEG00000012389	SMARCA4	50	97.252	Nomascus_leucogenys
ENSTGUG00000015488	-	99	89.882	ENSODEG00000017127	SMARCA4	53	89.882	Octodon_degus
ENSTGUG00000015488	-	98	84.423	ENSONIG00000018040	-	51	84.534	Oreochromis_niloticus
ENSTGUG00000015488	-	98	83.829	ENSONIG00000008196	smarca4a	50	89.922	Oreochromis_niloticus
ENSTGUG00000015488	-	99	87.692	ENSOCUG00000001787	SMARCA4	53	87.692	Oryctolagus_cuniculus
ENSTGUG00000015488	-	98	84.248	ENSORLG00000003955	-	59	79.599	Oryzias_latipes
ENSTGUG00000015488	-	98	83.867	ENSORLG00020009728	-	58	80.047	Oryzias_latipes_hni
ENSTGUG00000015488	-	98	83.690	ENSORLG00020004611	smarca4a	61	83.353	Oryzias_latipes_hni
ENSTGUG00000015488	-	98	84.010	ENSORLG00015007739	-	58	79.835	Oryzias_latipes_hsok
ENSTGUG00000015488	-	98	83.929	ENSORLG00015016560	smarca4a	54	89.922	Oryzias_latipes_hsok
ENSTGUG00000015488	-	98	84.067	ENSOMEG00000016626	-	51	84.298	Oryzias_melastigma
ENSTGUG00000015488	-	98	83.971	ENSOMEG00000007486	smarca4a	52	84.104	Oryzias_melastigma
ENSTGUG00000015488	-	94	95.970	ENSOGAG00000016148	SMARCA4	55	95.970	Otolemur_garnettii
ENSTGUG00000015488	-	99	90.284	ENSOARG00000017454	SMARCA4	53	90.284	Ovis_aries
ENSTGUG00000015488	-	92	99.153	ENSPPAG00000043191	SMARCA4	52	90.284	Pan_paniscus
ENSTGUG00000015488	-	94	95.970	ENSPPRG00000000064	SMARCA4	52	90.403	Panthera_pardus
ENSTGUG00000015488	-	92	99.145	ENSPTIG00000017447	SMARCA4	53	89.708	Panthera_tigris_altaica
ENSTGUG00000015488	-	92	99.153	ENSPTRG00000010488	SMARCA4	52	90.284	Pan_troglodytes
ENSTGUG00000015488	-	92	99.153	ENSPANG00000011042	SMARCA4	52	90.284	Papio_anubis
ENSTGUG00000015488	-	98	85.048	ENSPKIG00000010087	-	52	85.409	Paramormyrops_kingsleyae
ENSTGUG00000015488	-	99	88.507	ENSPSIG00000005547	SMARCA4	52	88.507	Pelodiscus_sinensis
ENSTGUG00000015488	-	100	89.474	ENSPEMG00000020389	Smarca4	52	90.166	Peromyscus_maniculatus_bairdii
ENSTGUG00000015488	-	99	90.273	ENSPCIG00000017138	SMARCA4	52	90.273	Phascolarctos_cinereus
ENSTGUG00000015488	-	99	83.705	ENSPFOG00000007892	smarca4a	51	83.705	Poecilia_formosa
ENSTGUG00000015488	-	99	85.159	ENSPFOG00000012930	-	50	85.142	Poecilia_formosa
ENSTGUG00000015488	-	98	85.018	ENSPLAG00000018616	-	52	85.242	Poecilia_latipinna
ENSTGUG00000015488	-	98	83.909	ENSPLAG00000014294	smarca4a	50	89.815	Poecilia_latipinna
ENSTGUG00000015488	-	99	85.159	ENSPMEG00000008929	-	54	85.259	Poecilia_mexicana
ENSTGUG00000015488	-	98	83.790	ENSPMEG00000003725	smarca4a	52	82.088	Poecilia_mexicana
ENSTGUG00000015488	-	99	85.395	ENSPREG00000014823	-	51	85.377	Poecilia_reticulata
ENSTGUG00000015488	-	98	83.871	ENSPREG00000014608	smarca4a	50	90.367	Poecilia_reticulata
ENSTGUG00000015488	-	100	89.591	ENSPPYG00000009568	SMARCA4	52	89.591	Pongo_abelii
ENSTGUG00000015488	-	92	99.153	ENSPCOG00000023011	SMARCA4	52	90.284	Propithecus_coquereli
ENSTGUG00000015488	-	98	84.067	ENSPNYG00000000717	smarca4a	50	89.922	Pundamilia_nyererei
ENSTGUG00000015488	-	98	84.304	ENSPNYG00000023995	-	56	84.534	Pundamilia_nyererei
ENSTGUG00000015488	-	98	82.775	ENSPNAG00000024136	smarca4a	54	83.037	Pygocentrus_nattereri
ENSTGUG00000015488	-	98	84.423	ENSPNAG00000006636	-	56	84.416	Pygocentrus_nattereri
ENSTGUG00000015488	-	99	90.166	ENSRNOG00000009271	Smarca4	52	90.166	Rattus_norvegicus
ENSTGUG00000015488	-	92	99.145	ENSRBIG00000038696	SMARCA4	52	90.284	Rhinopithecus_bieti
ENSTGUG00000015488	-	92	99.145	ENSRROG00000045509	SMARCA4	52	90.284	Rhinopithecus_roxellana
ENSTGUG00000015488	-	94	95.821	ENSSBOG00000026896	SMARCA4	52	90.284	Saimiri_boliviensis_boliviensis
ENSTGUG00000015488	-	99	90.047	ENSSHAG00000001642	SMARCA4	52	90.036	Sarcophilus_harrisii
ENSTGUG00000015488	-	98	84.185	ENSSFOG00015009921	-	53	84.552	Scleropages_formosus
ENSTGUG00000015488	-	98	85.154	ENSSFOG00015013823	smarca4	52	85.277	Scleropages_formosus
ENSTGUG00000015488	-	99	84.688	ENSSDUG00000005388	-	52	84.670	Seriola_dumerili
ENSTGUG00000015488	-	98	75.740	ENSSDUG00000017298	smarca4a	52	75.822	Seriola_dumerili
ENSTGUG00000015488	-	99	83.746	ENSSLDG00000024486	smarca4a	59	83.986	Seriola_lalandi_dorsalis
ENSTGUG00000015488	-	98	84.542	ENSSLDG00000023663	-	54	84.770	Seriola_lalandi_dorsalis
ENSTGUG00000015488	-	85	95.515	ENSSARG00000013477	SMARCA4	58	95.515	Sorex_araneus
ENSTGUG00000015488	-	99	87.176	ENSSPUG00000004558	SMARCA4	54	87.176	Sphenodon_punctatus
ENSTGUG00000015488	-	99	84.000	ENSSPAG00000012533	-	54	84.770	Stegastes_partitus
ENSTGUG00000015488	-	99	83.392	ENSSPAG00000004248	smarca4a	54	83.630	Stegastes_partitus
ENSTGUG00000015488	-	99	90.403	ENSSSCG00000013629	SMARCA4	52	90.403	Sus_scrofa
ENSTGUG00000015488	-	93	89.922	ENSTRUG00000001378	SMARCA4	52	81.582	Takifugu_rubripes
ENSTGUG00000015488	-	98	80.572	ENSTRUG00000004885	smarca4a	56	89.922	Takifugu_rubripes
ENSTGUG00000015488	-	98	84.386	ENSTNIG00000004536	SMARCA4	52	84.397	Tetraodon_nigroviridis
ENSTGUG00000015488	-	77	90.164	ENSTNIG00000004859	-	57	91.525	Tetraodon_nigroviridis
ENSTGUG00000015488	-	100	89.708	ENSTTRG00000009519	SMARCA4	52	89.708	Tursiops_truncatus
ENSTGUG00000015488	-	99	90.403	ENSUAMG00000014661	SMARCA4	52	90.403	Ursus_americanus
ENSTGUG00000015488	-	92	99.153	ENSUMAG00000022005	SMARCA4	63	90.403	Ursus_maritimus
ENSTGUG00000015488	-	99	90.403	ENSVVUG00000017820	SMARCA4	51	90.403	Vulpes_vulpes
ENSTGUG00000015488	-	99	84.670	ENSXETG00000009355	smarca4	55	91.473	Xenopus_tropicalis
ENSTGUG00000015488	-	98	84.780	ENSXCOG00000013494	-	55	85.006	Xiphophorus_couchianus
ENSTGUG00000015488	-	98	83.790	ENSXMAG00000006321	smarca4a	56	89.275	Xiphophorus_maculatus
ENSTGUG00000015488	-	99	84.923	ENSXMAG00000007030	-	54	85.024	Xiphophorus_maculatus