EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000016262 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 2726 bases
Position: chr1A_random:375158-377883
Accession: 100230364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000016569	Rsm1	PF08600.10	4.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000016905	ZC3HC1-201	965	XM_002187344	ENSTGUP00000016569	236 (aa)	XP_002187380	H1A108

Gene Model

Click here to download ENSTGUG00000016262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000016262's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000016262	ZC3HC1	99	59.592	ENSG00000091732	ZC3HC1	51	59.592	Homo_sapiens
ENSTGUG00000016262	ZC3HC1	100	69.583	ENSAPLG00000003832	ZC3HC1	54	70.417	Anas_platyrhynchos
ENSTGUG00000016262	ZC3HC1	100	60.569	ENSANAG00000022213	ZC3HC1	92	64.583	Aotus_nancymaae
ENSTGUG00000016262	ZC3HC1	97	36.400	ENSACLG00000025033	zc3hc1	53	36.111	Astatotilapia_calliptera
ENSTGUG00000016262	ZC3HC1	100	59.350	ENSCJAG00000010536	ZC3HC1	92	63.542	Callithrix_jacchus
ENSTGUG00000016262	ZC3HC1	100	56.911	ENSCHIG00000014103	ZC3HC1	50	56.911	Capra_hircus
ENSTGUG00000016262	ZC3HC1	97	56.250	ENSCAPG00000016300	ZC3HC1	58	55.000	Cavia_aperea
ENSTGUG00000016262	ZC3HC1	100	59.756	ENSCCAG00000020384	ZC3HC1	100	60.526	Cebus_capucinus
ENSTGUG00000016262	ZC3HC1	100	59.756	ENSCATG00000023130	ZC3HC1	65	59.756	Cercocebus_atys
ENSTGUG00000016262	ZC3HC1	83	57.971	ENSCLAG00000008260	ZC3HC1	54	56.522	Chinchilla_lanigera
ENSTGUG00000016262	ZC3HC1	100	58.943	ENSCSAG00000009881	ZC3HC1	65	58.943	Chlorocebus_sabaeus
ENSTGUG00000016262	ZC3HC1	99	58.436	ENSCHOG00000011846	ZC3HC1	54	58.436	Choloepus_hoffmanni
ENSTGUG00000016262	ZC3HC1	100	59.350	ENSCANG00000029091	ZC3HC1	92	63.542	Colobus_angolensis_palliatus
ENSTGUG00000016262	ZC3HC1	97	57.025	ENSDORG00000008697	Zc3hc1	51	57.025	Dipodomys_ordii
ENSTGUG00000016262	ZC3HC1	100	57.724	ENSEASG00005008789	ZC3HC1	52	57.724	Equus_asinus_asinus
ENSTGUG00000016262	ZC3HC1	97	40.230	ENSELUG00000023168	zc3hc1	50	42.045	Esox_lucius
ENSTGUG00000016262	ZC3HC1	100	57.724	ENSFCAG00000010429	ZC3HC1	52	57.724	Felis_catus
ENSTGUG00000016262	ZC3HC1	100	86.475	ENSFALG00000005006	ZC3HC1	53	86.475	Ficedula_albicollis
ENSTGUG00000016262	ZC3HC1	99	37.008	ENSFHEG00000020149	zc3hc1	50	36.078	Fundulus_heteroclitus
ENSTGUG00000016262	ZC3HC1	97	32.677	ENSGMOG00000002914	zc3hc1	50	32.677	Gadus_morhua
ENSTGUG00000016262	ZC3HC1	99	63.934	ENSGAGG00000016106	ZC3HC1	62	63.934	Gopherus_agassizii
ENSTGUG00000016262	ZC3HC1	99	59.592	ENSGGOG00000015504	ZC3HC1	91	63.351	Gorilla_gorilla
ENSTGUG00000016262	ZC3HC1	97	34.351	ENSLBEG00000017325	zc3hc1	53	34.351	Labrus_bergylta
ENSTGUG00000016262	ZC3HC1	100	58.943	ENSMFAG00000030176	ZC3HC1	65	58.943	Macaca_fascicularis
ENSTGUG00000016262	ZC3HC1	100	58.943	ENSMMUG00000006155	ZC3HC1	66	58.943	Macaca_mulatta
ENSTGUG00000016262	ZC3HC1	100	59.350	ENSMNEG00000011833	ZC3HC1	90	63.542	Macaca_nemestrina
ENSTGUG00000016262	ZC3HC1	100	59.756	ENSMLEG00000027328	ZC3HC1	92	64.062	Mandrillus_leucophaeus
ENSTGUG00000016262	ZC3HC1	97	35.521	ENSMAMG00000010691	zc3hc1	50	34.363	Mastacembelus_armatus
ENSTGUG00000016262	ZC3HC1	97	57.563	ENSMAUG00000017032	Zc3hc1	54	57.563	Mesocricetus_auratus
ENSTGUG00000016262	ZC3HC1	97	34.375	ENSMMOG00000002204	zc3hc1	56	33.984	Mola_mola
ENSTGUG00000016262	ZC3HC1	100	55.466	ENSMODG00000014630	ZC3HC1	52	55.466	Monodelphis_domestica
ENSTGUG00000016262	ZC3HC1	97	59.244	MGP_PahariEiJ_G0021941	Zc3hc1	50	59.244	Mus_pahari
ENSTGUG00000016262	ZC3HC1	99	51.210	ENSMLUG00000029228	-	71	51.613	Myotis_lucifugus
ENSTGUG00000016262	ZC3HC1	99	60.000	ENSNLEG00000012698	ZC3HC1	65	60.000	Nomascus_leucogenys
ENSTGUG00000016262	ZC3HC1	97	58.996	ENSOANG00000011460	ZC3HC1	53	58.537	Ornithorhynchus_anatinus
ENSTGUG00000016262	ZC3HC1	99	59.592	ENSPPAG00000043172	ZC3HC1	91	63.351	Pan_paniscus
ENSTGUG00000016262	ZC3HC1	100	57.317	ENSPPRG00000001004	ZC3HC1	52	57.317	Panthera_pardus
ENSTGUG00000016262	ZC3HC1	100	58.130	ENSPTIG00000007823	ZC3HC1	52	58.130	Panthera_tigris_altaica
ENSTGUG00000016262	ZC3HC1	99	59.592	ENSPTRG00000019685	ZC3HC1	91	63.351	Pan_troglodytes
ENSTGUG00000016262	ZC3HC1	100	59.756	ENSPANG00000014229	ZC3HC1	92	64.062	Papio_anubis
ENSTGUG00000016262	ZC3HC1	100	57.895	ENSPCIG00000020619	ZC3HC1	63	57.895	Phascolarctos_cinereus
ENSTGUG00000016262	ZC3HC1	99	36.078	ENSPFOG00000003466	zc3hc1	50	35.547	Poecilia_formosa
ENSTGUG00000016262	ZC3HC1	99	36.078	ENSPLAG00000022211	zc3hc1	50	35.547	Poecilia_latipinna
ENSTGUG00000016262	ZC3HC1	99	36.078	ENSPMEG00000001458	zc3hc1	54	35.547	Poecilia_mexicana
ENSTGUG00000016262	ZC3HC1	99	57.959	ENSPPYG00000017998	ZC3HC1	53	57.959	Pongo_abelii
ENSTGUG00000016262	ZC3HC1	100	59.514	ENSPCAG00000001182	ZC3HC1	53	59.514	Procavia_capensis
ENSTGUG00000016262	ZC3HC1	100	59.919	ENSPCOG00000017354	ZC3HC1	54	59.919	Propithecus_coquereli
ENSTGUG00000016262	ZC3HC1	100	59.350	ENSRBIG00000029409	ZC3HC1	92	63.542	Rhinopithecus_bieti
ENSTGUG00000016262	ZC3HC1	100	59.350	ENSRROG00000041831	ZC3HC1	92	63.542	Rhinopithecus_roxellana
ENSTGUG00000016262	ZC3HC1	100	60.163	ENSSBOG00000032787	ZC3HC1	92	64.583	Saimiri_boliviensis_boliviensis
ENSTGUG00000016262	ZC3HC1	100	58.333	ENSSHAG00000002529	ZC3HC1	53	58.333	Sarcophilus_harrisii
ENSTGUG00000016262	ZC3HC1	100	59.184	ENSSSCG00000016565	ZC3HC1	63	59.184	Sus_scrofa
ENSTGUG00000016262	ZC3HC1	97	35.573	ENSTNIG00000007585	zc3hc1	50	33.871	Tetraodon_nigroviridis
ENSTGUG00000016262	ZC3HC1	100	58.130	ENSTTRG00000008458	ZC3HC1	51	58.130	Tursiops_truncatus
ENSTGUG00000016262	ZC3HC1	99	35.573	ENSXMAG00000010979	zc3hc1	53	35.039	Xiphophorus_maculatus