EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000016409 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: 39S ribosomal protein L48%2C mitochondrial-like
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 1450 bases
Position: chr1_random:768260-769709
Accession: 105758630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000016709	Ribosomal_S10	PF00338.22	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000017053	-	282	XM_012569419	ENSTGUP00000016709	94 (aa)	XP_012424873	H1A1E7

Gene Model

Click here to download ENSTGUG00000016409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000016409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000016409	-	100	97.872	ENSTGUG00000013469	-	54	97.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000016409	-	98	63.043	ENSG00000175581	MRPL48	53	68.333	Homo_sapiens
ENSTGUG00000016409	-	100	62.766	ENSCAFG00000005585	-	53	61.702	Canis_familiaris
ENSTGUG00000016409	-	63	67.797	ENSCAPG00000013554	-	100	67.797	Cavia_aperea
ENSTGUG00000016409	-	100	58.511	ENSDNOG00000002177	MRPL48	53	58.511	Dasypus_novemcinctus
ENSTGUG00000016409	-	64	66.667	ENSDORG00000000644	-	53	66.667	Dipodomys_ordii
ENSTGUG00000016409	-	100	60.638	ENSFCAG00000025668	MRPL48	53	66.667	Felis_catus
ENSTGUG00000016409	-	100	47.872	ENSGMOG00000018272	mrpl48	55	47.872	Gadus_morhua
ENSTGUG00000016409	-	98	63.043	ENSGGOG00000022915	MRPL48	53	68.333	Gorilla_gorilla
ENSTGUG00000016409	-	100	57.447	ENSHGLG00000006113	MRPL48	53	61.667	Heterocephalus_glaber_female
ENSTGUG00000016409	-	100	59.574	ENSLAFG00000003800	MRPL48	53	59.574	Loxodonta_africana
ENSTGUG00000016409	-	98	63.043	ENSMNEG00000043715	MRPL48	53	68.333	Macaca_nemestrina
ENSTGUG00000016409	-	64	68.333	ENSMOCG00000013808	Mrpl48	53	68.333	Microtus_ochrogaster
ENSTGUG00000016409	-	62	51.724	ENSMMOG00000020651	mrpl48	51	51.724	Mola_mola
ENSTGUG00000016409	-	100	61.702	ENSMUSG00000030706	Mrpl48	100	67.797	Mus_musculus
ENSTGUG00000016409	-	100	59.574	ENSOPRG00000010373	MRPL48	50	59.574	Ochotona_princeps
ENSTGUG00000016409	-	100	57.447	ENSODEG00000005929	MRPL48	53	60.000	Octodon_degus
ENSTGUG00000016409	-	98	61.957	ENSOGAG00000004771	-	63	61.957	Otolemur_garnettii
ENSTGUG00000016409	-	100	61.702	ENSPPRG00000008470	MRPL48	53	68.333	Panthera_pardus
ENSTGUG00000016409	-	100	61.702	ENSPTIG00000020025	MRPL48	53	68.333	Panthera_tigris_altaica
ENSTGUG00000016409	-	62	51.724	ENSPKIG00000024210	mrpl48	51	51.724	Paramormyrops_kingsleyae
ENSTGUG00000016409	-	82	55.844	ENSPMGG00000004557	mrpl48	61	54.255	Periophthalmus_magnuspinnatus
ENSTGUG00000016409	-	64	70.000	ENSPEMG00000021769	Mrpl48	53	70.000	Peromyscus_maniculatus_bairdii
ENSTGUG00000016409	-	97	56.044	ENSSHAG00000014091	MRPL48	52	56.044	Sarcophilus_harrisii
ENSTGUG00000016409	-	100	62.766	ENSVVUG00000024543	-	53	66.667	Vulpes_vulpes