EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000016423 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: poly(U)-binding-splicing factor PUF60-like
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 2565 bases
Position: chrUn:80888764-80891328
Accession: 100231421
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000016725	RRM_1	PF00076.22	6.3e-33	1	2
ENSTGUP00000016725	RRM_1	PF00076.22	6.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000017070	-	468	XM_002199825	ENSTGUP00000016725	156 (aa)	XP_002199861	H1A1G3

Gene Model

Click here to download ENSTGUG00000016423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000016423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000016423	-	91	31.469	ENSTGUG00000004470	SF3B4	52	30.000
ENSTGUG00000016423	-	92	30.000	ENSTGUG00000002850	HNRNPDL	61	30.000
ENSTGUG00000016423	-	52	33.333	ENSTGUG00000008864	-	52	33.333
ENSTGUG00000016423	-	92	32.432	ENSTGUG00000011148	TIAL1	66	30.128
ENSTGUG00000016423	-	53	30.488	ENSTGUG00000007323	-	64	30.488
ENSTGUG00000016423	-	93	30.986	ENSTGUG00000001266	PABPC4	50	30.986
ENSTGUG00000016423	-	92	30.345	ENSTGUG00000017307	TIA1	71	30.345
ENSTGUG00000016423	-	60	31.250	ENSTGUG00000001647	-	70	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000016423	-	100	100.000	ENSG00000179950	PUF60	62	100.000	Homo_sapiens
ENSTGUG00000016423	-	78	97.333	ENSACLG00000016311	-	53	96.053	Astatotilapia_calliptera
ENSTGUG00000016423	-	96	59.494	WBGene00004389	rnp-6	57	58.788	Caenorhabditis_elegans
ENSTGUG00000016423	-	99	67.097	ENSCING00000002156	-	51	67.097	Ciona_intestinalis
ENSTGUG00000016423	-	100	100.000	ENSCANG00000041843	PUF60	50	100.000	Colobus_angolensis_palliatus
ENSTGUG00000016423	-	100	93.590	ENSDARG00000001241	puf60b	75	93.590	Danio_rerio
ENSTGUG00000016423	-	100	97.561	ENSDARG00000032175	puf60a	77	96.795	Danio_rerio
ENSTGUG00000016423	-	100	100.000	ENSGALG00000039901	PUF60	57	100.000	Gallus_gallus
ENSTGUG00000016423	-	100	96.154	ENSIPUG00000002453	puf60a	52	96.154	Ictalurus_punctatus
ENSTGUG00000016423	-	100	99.359	ENSLACG00000005456	PUF60	51	99.359	Latimeria_chalumnae
ENSTGUG00000016423	-	100	100.000	ENSMMUG00000013558	PUF60	52	100.000	Macaca_mulatta
ENSTGUG00000016423	-	100	100.000	ENSMGAG00000013070	PUF60	57	100.000	Meleagris_gallopavo
ENSTGUG00000016423	-	100	100.000	ENSMAUG00000014267	-	51	100.000	Mesocricetus_auratus
ENSTGUG00000016423	-	100	93.590	ENSMMOG00000018059	-	65	67.442	Mola_mola
ENSTGUG00000016423	-	100	94.872	ENSNBRG00000013047	puf60b	78	61.688	Neolamprologus_brichardi
ENSTGUG00000016423	-	100	100.000	ENSODEG00000014024	-	50	100.000	Octodon_degus
ENSTGUG00000016423	-	100	94.231	ENSOMEG00000022185	-	51	94.231	Oryzias_melastigma
ENSTGUG00000016423	-	100	96.795	ENSPKIG00000004295	puf60a	56	96.795	Paramormyrops_kingsleyae
ENSTGUG00000016423	-	100	89.103	ENSPMAG00000009884	puf60b	96	89.103	Petromyzon_marinus
ENSTGUG00000016423	-	100	100.000	ENSPCAG00000014837	PUF60	50	100.000	Procavia_capensis
ENSTGUG00000016423	-	100	83.974	ENSSPUG00000013518	PUF60	50	83.974	Sphenodon_punctatus
ENSTGUG00000016423	-	100	100.000	ENSTBEG00000002751	-	62	100.000	Tupaia_belangeri