EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000016504 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 1900 bases
Position: chrUn:112672165-112674064
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000016804	RNA_pol_Rpb6	PF01192.22	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000017153	-	267	-	ENSTGUP00000016804	88 (aa)	-	H1A1P2

Gene Model

Click here to download ENSTGUG00000016504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000016504's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000016504	-	100	100.000	ENSTGUG00000010476	POLR2F	64	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000016504	-	100	97.727	ENSG00000100142	POLR2F	90	97.727	Homo_sapiens
ENSTGUG00000016504	-	88	88.312	ENSAPOG00000002902	polr2f	57	88.889	Acanthochromis_polyacanthus
ENSTGUG00000016504	-	100	97.727	ENSAMEG00000010331	POLR2F	69	97.727	Ailuropoda_melanoleuca
ENSTGUG00000016504	-	88	88.312	ENSACIG00000000923	polr2f	57	88.889	Amphilophus_citrinellus
ENSTGUG00000016504	-	88	89.610	ENSAOCG00000003182	polr2f	57	90.278	Amphiprion_ocellaris
ENSTGUG00000016504	-	88	89.610	ENSAPEG00000012999	polr2f	57	90.278	Amphiprion_percula
ENSTGUG00000016504	-	88	88.312	ENSATEG00000008929	polr2f	57	88.889	Anabas_testudineus
ENSTGUG00000016504	-	100	98.864	ENSAPLG00000015235	POLR2F	70	98.864	Anas_platyrhynchos
ENSTGUG00000016504	-	100	98.864	ENSACAG00000015288	POLR2F	69	98.864	Anolis_carolinensis
ENSTGUG00000016504	-	100	97.727	ENSANAG00000020840	POLR2F	72	97.727	Aotus_nancymaae
ENSTGUG00000016504	-	88	89.610	ENSACLG00000016129	polr2f	57	90.278	Astatotilapia_calliptera
ENSTGUG00000016504	-	88	89.610	ENSAMXG00000012812	polr2f	57	90.278	Astyanax_mexicanus
ENSTGUG00000016504	-	100	97.727	ENSBTAG00000004820	POLR2F	69	97.727	Bos_taurus
ENSTGUG00000016504	-	100	97.727	ENSCJAG00000048241	POLR2F	72	97.727	Callithrix_jacchus
ENSTGUG00000016504	-	100	97.727	ENSCAFG00000001437	POLR2F	69	97.727	Canis_familiaris
ENSTGUG00000016504	-	100	97.727	ENSCHIG00000012907	POLR2F	69	97.727	Capra_hircus
ENSTGUG00000016504	-	100	96.591	ENSTSYG00000008187	POLR2F	70	96.591	Carlito_syrichta
ENSTGUG00000016504	-	100	97.727	ENSCAPG00000013419	POLR2F	69	97.727	Cavia_aperea
ENSTGUG00000016504	-	100	97.727	ENSCPOG00000034094	POLR2F	69	97.727	Cavia_porcellus
ENSTGUG00000016504	-	100	97.727	ENSCCAG00000036489	POLR2F	70	97.727	Cebus_capucinus
ENSTGUG00000016504	-	100	97.727	ENSCATG00000041014	POLR2F	72	97.727	Cercocebus_atys
ENSTGUG00000016504	-	100	97.727	ENSCLAG00000017167	POLR2F	69	97.727	Chinchilla_lanigera
ENSTGUG00000016504	-	100	97.727	ENSCSAG00000006862	POLR2F	69	97.727	Chlorocebus_sabaeus
ENSTGUG00000016504	-	85	73.684	ENSCING00000019359	-	50	77.465	Ciona_intestinalis
ENSTGUG00000016504	-	100	97.727	ENSCANG00000041884	POLR2F	72	97.727	Colobus_angolensis_palliatus
ENSTGUG00000016504	-	100	97.727	ENSCGRG00001023541	POLR2F	69	97.727	Cricetulus_griseus_chok1gshd
ENSTGUG00000016504	-	100	97.727	ENSCGRG00000011921	POLR2F	69	97.727	Cricetulus_griseus_crigri
ENSTGUG00000016504	-	88	89.610	ENSCSEG00000006848	polr2f	57	90.278	Cynoglossus_semilaevis
ENSTGUG00000016504	-	99	88.506	ENSCVAG00000010437	polr2f	57	90.278	Cyprinodon_variegatus
ENSTGUG00000016504	-	88	88.312	ENSDARG00000036625	polr2f	57	88.889	Danio_rerio
ENSTGUG00000016504	-	100	97.727	ENSDNOG00000005884	POLR2F	69	97.727	Dasypus_novemcinctus
ENSTGUG00000016504	-	100	97.727	ENSDORG00000024789	Polr2f	69	97.727	Dipodomys_ordii
ENSTGUG00000016504	-	82	70.667	FBgn0003275	RpII18	56	70.667	Drosophila_melanogaster
ENSTGUG00000016504	-	77	82.353	ENSEBUG00000008509	polr2f	70	82.353	Eptatretus_burgeri
ENSTGUG00000016504	-	70	74.194	ENSEBUG00000002842	-	63	63.889	Eptatretus_burgeri
ENSTGUG00000016504	-	99	96.552	ENSEASG00005018802	-	78	96.552	Equus_asinus_asinus
ENSTGUG00000016504	-	100	94.318	ENSEEUG00000011014	POLR2F	69	94.318	Erinaceus_europaeus
ENSTGUG00000016504	-	88	87.013	ENSELUG00000000319	polr2f	57	87.500	Esox_lucius
ENSTGUG00000016504	-	100	97.727	ENSFCAG00000002806	POLR2F	72	97.727	Felis_catus
ENSTGUG00000016504	-	100	97.727	ENSFDAG00000009926	POLR2F	69	97.727	Fukomys_damarensis
ENSTGUG00000016504	-	93	89.024	ENSFHEG00000005448	polr2f	57	88.889	Fundulus_heteroclitus
ENSTGUG00000016504	-	99	81.609	ENSGMOG00000009967	polr2f	56	81.944	Gadus_morhua
ENSTGUG00000016504	-	100	96.591	ENSGALG00000012291	POLR2F	69	96.591	Gallus_gallus
ENSTGUG00000016504	-	99	88.506	ENSGAFG00000017573	polr2f	57	90.278	Gambusia_affinis
ENSTGUG00000016504	-	99	83.908	ENSGACG00000007322	polr2f	57	87.500	Gasterosteus_aculeatus
ENSTGUG00000016504	-	100	98.864	ENSGAGG00000021757	POLR2F	69	98.864	Gopherus_agassizii
ENSTGUG00000016504	-	100	97.727	ENSGGOG00000005213	POLR2F	72	97.727	Gorilla_gorilla
ENSTGUG00000016504	-	88	89.610	ENSHBUG00000022089	polr2f	57	90.278	Haplochromis_burtoni
ENSTGUG00000016504	-	100	97.727	ENSHGLG00000018942	POLR2F	69	97.727	Heterocephalus_glaber_female
ENSTGUG00000016504	-	100	97.727	ENSHGLG00100012851	POLR2F	69	97.727	Heterocephalus_glaber_male
ENSTGUG00000016504	-	88	88.312	ENSHCOG00000006149	polr2f	57	88.889	Hippocampus_comes
ENSTGUG00000016504	-	77	92.647	ENSIPUG00000000814	polr2f	70	92.647	Ictalurus_punctatus
ENSTGUG00000016504	-	100	97.727	ENSSTOG00000025722	POLR2F	69	97.727	Ictidomys_tridecemlineatus
ENSTGUG00000016504	-	100	97.727	ENSJJAG00000008097	Polr2f	69	97.727	Jaculus_jaculus
ENSTGUG00000016504	-	88	89.610	ENSKMAG00000014230	polr2f	57	90.278	Kryptolebias_marmoratus
ENSTGUG00000016504	-	88	87.013	ENSLBEG00000008383	polr2f	60	87.500	Labrus_bergylta
ENSTGUG00000016504	-	93	91.463	ENSLACG00000003931	POLR2F	65	91.463	Latimeria_chalumnae
ENSTGUG00000016504	-	88	86.250	ENSLOCG00000011827	polr2f	55	87.500	Lepisosteus_oculatus
ENSTGUG00000016504	-	100	97.727	ENSLAFG00000012632	POLR2F	69	97.727	Loxodonta_africana
ENSTGUG00000016504	-	100	97.727	ENSMFAG00000033687	POLR2F	72	97.727	Macaca_fascicularis
ENSTGUG00000016504	-	100	97.727	ENSMMUG00000038231	POLR2F	72	97.727	Macaca_mulatta
ENSTGUG00000016504	-	100	97.727	ENSMNEG00000044365	POLR2F	72	97.727	Macaca_nemestrina
ENSTGUG00000016504	-	100	97.727	ENSMLEG00000033077	POLR2F	72	97.727	Mandrillus_leucophaeus
ENSTGUG00000016504	-	88	89.610	ENSMAMG00000008056	polr2f	57	90.278	Mastacembelus_armatus
ENSTGUG00000016504	-	88	89.610	ENSMZEG00005005705	polr2f	57	90.278	Maylandia_zebra
ENSTGUG00000016504	-	100	96.591	ENSMGAG00000012504	POLR2F	69	96.591	Meleagris_gallopavo
ENSTGUG00000016504	-	100	97.727	ENSMAUG00000018586	Polr2f	69	97.727	Mesocricetus_auratus
ENSTGUG00000016504	-	100	97.727	ENSMICG00000013128	POLR2F	72	97.727	Microcebus_murinus
ENSTGUG00000016504	-	100	97.727	ENSMOCG00000000237	Polr2f	69	97.727	Microtus_ochrogaster
ENSTGUG00000016504	-	88	89.610	ENSMMOG00000005106	polr2f	57	90.278	Mola_mola
ENSTGUG00000016504	-	100	97.727	ENSMODG00000019063	POLR2F	69	97.727	Monodelphis_domestica
ENSTGUG00000016504	-	88	89.610	ENSMALG00000001444	polr2f	57	90.278	Monopterus_albus
ENSTGUG00000016504	-	100	97.727	MGP_CAROLIEiJ_G0020006	Polr2f	69	97.727	Mus_caroli
ENSTGUG00000016504	-	100	97.727	ENSMUSG00000033020	Polr2f	90	97.727	Mus_musculus
ENSTGUG00000016504	-	100	97.727	MGP_PahariEiJ_G0020008	Polr2f	69	97.727	Mus_pahari
ENSTGUG00000016504	-	100	97.727	MGP_SPRETEiJ_G0020904	Polr2f	69	97.727	Mus_spretus
ENSTGUG00000016504	-	100	97.727	ENSMPUG00000012997	POLR2F	69	97.727	Mustela_putorius_furo
ENSTGUG00000016504	-	82	90.278	ENSMLUG00000029612	-	57	90.278	Myotis_lucifugus
ENSTGUG00000016504	-	100	96.591	ENSMLUG00000014315	-	68	96.591	Myotis_lucifugus
ENSTGUG00000016504	-	100	97.727	ENSNGAG00000020682	Polr2f	69	97.727	Nannospalax_galili
ENSTGUG00000016504	-	88	88.312	ENSNBRG00000002492	polr2f	57	88.889	Neolamprologus_brichardi
ENSTGUG00000016504	-	100	97.727	ENSNLEG00000014987	-	72	97.727	Nomascus_leucogenys
ENSTGUG00000016504	-	100	97.727	ENSODEG00000014123	POLR2F	69	97.727	Octodon_degus
ENSTGUG00000016504	-	88	88.312	ENSONIG00000008394	polr2f	57	88.889	Oreochromis_niloticus
ENSTGUG00000016504	-	100	98.864	ENSOANG00000014684	POLR2F	69	98.864	Ornithorhynchus_anatinus
ENSTGUG00000016504	-	100	97.727	ENSOCUG00000012064	POLR2F	69	97.727	Oryctolagus_cuniculus
ENSTGUG00000016504	-	99	86.207	ENSORLG00000014580	polr2f	57	88.889	Oryzias_latipes
ENSTGUG00000016504	-	99	87.356	ENSORLG00020006910	polr2f	57	90.278	Oryzias_latipes_hni
ENSTGUG00000016504	-	100	97.727	ENSOGAG00000025463	POLR2F	69	97.727	Otolemur_garnettii
ENSTGUG00000016504	-	100	97.727	ENSOARG00000014692	POLR2F	69	97.727	Ovis_aries
ENSTGUG00000016504	-	100	97.727	ENSPPAG00000024276	POLR2F	72	97.727	Pan_paniscus
ENSTGUG00000016504	-	100	97.727	ENSPPRG00000013030	POLR2F	72	97.727	Panthera_pardus
ENSTGUG00000016504	-	100	94.318	ENSPTIG00000000632	POLR2F	72	94.318	Panthera_tigris_altaica
ENSTGUG00000016504	-	100	97.727	ENSPTRG00000014356	POLR2F	72	97.727	Pan_troglodytes
ENSTGUG00000016504	-	100	97.727	ENSPANG00000023979	POLR2F	72	97.727	Papio_anubis
ENSTGUG00000016504	-	88	89.610	ENSPKIG00000002464	polr2f	57	90.278	Paramormyrops_kingsleyae
ENSTGUG00000016504	-	88	89.610	ENSPMGG00000009619	polr2f	57	90.278	Periophthalmus_magnuspinnatus
ENSTGUG00000016504	-	100	97.727	ENSPEMG00000008322	Polr2f	69	97.727	Peromyscus_maniculatus_bairdii
ENSTGUG00000016504	-	100	97.727	ENSPCIG00000012000	-	69	97.727	Phascolarctos_cinereus
ENSTGUG00000016504	-	99	88.506	ENSPFOG00000000139	polr2f	57	90.278	Poecilia_formosa
ENSTGUG00000016504	-	99	88.506	ENSPLAG00000000988	polr2f	57	90.278	Poecilia_latipinna
ENSTGUG00000016504	-	99	88.506	ENSPMEG00000019063	polr2f	57	90.278	Poecilia_mexicana
ENSTGUG00000016504	-	99	88.506	ENSPREG00000016749	polr2f	73	90.278	Poecilia_reticulata
ENSTGUG00000016504	-	100	97.727	ENSPPYG00000011809	POLR2F	69	97.727	Pongo_abelii
ENSTGUG00000016504	-	100	97.727	ENSPCOG00000025716	POLR2F	72	97.727	Propithecus_coquereli
ENSTGUG00000016504	-	99	97.701	ENSPVAG00000010107	POLR2F	55	97.701	Pteropus_vampyrus
ENSTGUG00000016504	-	88	89.610	ENSPNYG00000019790	polr2f	57	90.278	Pundamilia_nyererei
ENSTGUG00000016504	-	88	89.610	ENSPNAG00000009017	polr2f	57	90.278	Pygocentrus_nattereri
ENSTGUG00000016504	-	100	97.727	ENSRNOG00000011214	Polr2f	69	97.727	Rattus_norvegicus
ENSTGUG00000016504	-	100	97.727	ENSRBIG00000044878	POLR2F	72	97.727	Rhinopithecus_bieti
ENSTGUG00000016504	-	100	97.727	ENSRROG00000019586	POLR2F	72	97.727	Rhinopithecus_roxellana
ENSTGUG00000016504	-	100	97.727	ENSSBOG00000023340	POLR2F	72	97.727	Saimiri_boliviensis_boliviensis
ENSTGUG00000016504	-	100	97.727	ENSSHAG00000008502	POLR2F	69	97.727	Sarcophilus_harrisii
ENSTGUG00000016504	-	88	89.610	ENSSFOG00015012810	polr2f	57	90.278	Scleropages_formosus
ENSTGUG00000016504	-	88	88.312	ENSSMAG00000005354	polr2f	57	88.889	Scophthalmus_maximus
ENSTGUG00000016504	-	88	89.610	ENSSDUG00000016273	polr2f	57	90.278	Seriola_dumerili
ENSTGUG00000016504	-	88	89.610	ENSSLDG00000024895	polr2f	57	90.278	Seriola_lalandi_dorsalis
ENSTGUG00000016504	-	100	98.864	ENSSPUG00000011343	POLR2F	69	98.864	Sphenodon_punctatus
ENSTGUG00000016504	-	88	89.610	ENSSPAG00000019646	polr2f	57	90.278	Stegastes_partitus
ENSTGUG00000016504	-	100	97.727	ENSSSCG00000000116	POLR2F	69	97.727	Sus_scrofa
ENSTGUG00000016504	-	88	89.610	ENSTNIG00000010827	polr2f	57	90.278	Tetraodon_nigroviridis
ENSTGUG00000016504	-	99	97.701	ENSTTRG00000004817	POLR2F	55	97.701	Tursiops_truncatus
ENSTGUG00000016504	-	100	97.727	ENSUAMG00000020504	POLR2F	69	97.727	Ursus_americanus
ENSTGUG00000016504	-	100	97.727	ENSUMAG00000015052	POLR2F	69	97.727	Ursus_maritimus
ENSTGUG00000016504	-	100	97.727	ENSVVUG00000024021	POLR2F	76	96.591	Vulpes_vulpes
ENSTGUG00000016504	-	93	91.463	ENSXETG00000006346	polr2f	65	91.463	Xenopus_tropicalis
ENSTGUG00000016504	-	99	88.506	ENSXCOG00000015983	polr2f	57	90.278	Xiphophorus_couchianus
ENSTGUG00000016504	-	99	88.506	ENSXMAG00000001559	polr2f	57	90.278	Xiphophorus_maculatus