EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000016516 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 762 bases
Position: chrUn:112768099-112768860
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000016811	zf-C2H2	PF00096.26	4.9e-53	1	8
ENSTGUP00000016811	zf-C2H2	PF00096.26	4.9e-53	2	8
ENSTGUP00000016811	zf-C2H2	PF00096.26	4.9e-53	3	8
ENSTGUP00000016811	zf-C2H2	PF00096.26	4.9e-53	4	8
ENSTGUP00000016811	zf-C2H2	PF00096.26	4.9e-53	5	8
ENSTGUP00000016811	zf-C2H2	PF00096.26	4.9e-53	6	8
ENSTGUP00000016811	zf-C2H2	PF00096.26	4.9e-53	7	8
ENSTGUP00000016811	zf-C2H2	PF00096.26	4.9e-53	8	8
ENSTGUP00000016811	zf-met	PF12874.7	3.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000017160	-	729	-	ENSTGUP00000016811	243 (aa)	-	H1A1P9

Gene Model

Click here to download ENSTGUG00000016516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000016516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000016516	-	100	41.629	ENSTGUG00000001920	PRDM5	78	41.629
ENSTGUG00000016516	-	99	36.413	ENSTGUG00000010006	ZNF710	99	36.413
ENSTGUG00000016516	-	100	43.810	ENSTGUG00000009074	ZNF236	63	43.810
ENSTGUG00000016516	-	99	34.545	ENSTGUG00000008724	SNAI1	60	34.545
ENSTGUG00000016516	-	99	65.066	ENSTGUG00000014292	-	98	65.066
ENSTGUG00000016516	-	99	30.870	ENSTGUG00000010575	ZNF521	52	30.870
ENSTGUG00000016516	-	99	84.127	ENSTGUG00000018518	-	100	84.127
ENSTGUG00000016516	-	99	65.608	ENSTGUG00000015260	-	97	71.196
ENSTGUG00000016516	-	99	64.050	ENSTGUG00000014079	-	100	64.050
ENSTGUG00000016516	-	99	63.057	ENSTGUG00000018374	-	99	59.036
ENSTGUG00000016516	-	91	75.524	ENSTGUG00000018439	-	100	75.524
ENSTGUG00000016516	-	99	62.593	ENSTGUG00000015210	-	100	64.876
ENSTGUG00000016516	-	100	50.000	ENSTGUG00000017059	-	99	50.000
ENSTGUG00000016516	-	100	66.255	ENSTGUG00000015090	-	100	67.490
ENSTGUG00000016516	-	95	41.667	ENSTGUG00000016690	-	91	41.667
ENSTGUG00000016516	-	99	46.119	ENSTGUG00000005282	-	100	46.119
ENSTGUG00000016516	-	99	39.416	ENSTGUG00000006801	SCRT2	66	39.007
ENSTGUG00000016516	-	99	69.444	ENSTGUG00000018349	-	100	69.444
ENSTGUG00000016516	-	99	43.850	ENSTGUG00000006060	GFI1	54	43.850
ENSTGUG00000016516	-	99	86.239	ENSTGUG00000018351	-	100	86.239
ENSTGUG00000016516	-	94	84.080	ENSTGUG00000014614	-	99	84.080
ENSTGUG00000016516	-	99	70.588	ENSTGUG00000018385	-	100	70.588
ENSTGUG00000016516	-	100	79.012	ENSTGUG00000014888	-	99	81.070
ENSTGUG00000016516	-	99	35.766	ENSTGUG00000010914	-	50	35.766
ENSTGUG00000016516	-	99	69.231	ENSTGUG00000018254	-	100	69.231
ENSTGUG00000016516	-	100	38.211	ENSTGUG00000002589	ZBTB48	64	38.211
ENSTGUG00000016516	-	100	68.063	ENSTGUG00000015549	-	100	71.204
ENSTGUG00000016516	-	99	64.050	ENSTGUG00000016220	-	97	64.050
ENSTGUG00000016516	-	90	92.000	ENSTGUG00000018327	-	100	92.000
ENSTGUG00000016516	-	99	39.241	ENSTGUG00000015149	-	65	39.241
ENSTGUG00000016516	-	99	80.000	ENSTGUG00000018445	-	95	80.000
ENSTGUG00000016516	-	95	72.093	ENSTGUG00000016850	-	100	80.500
ENSTGUG00000016516	-	100	74.539	ENSTGUG00000016781	-	79	76.763
ENSTGUG00000016516	-	91	57.692	ENSTGUG00000000271	-	69	56.604
ENSTGUG00000016516	-	95	88.614	ENSTGUG00000013736	-	100	88.614
ENSTGUG00000016516	-	100	43.049	ENSTGUG00000004796	ZNF319	93	42.667
ENSTGUG00000016516	-	99	92.857	ENSTGUG00000018542	-	100	92.857
ENSTGUG00000016516	-	100	45.274	ENSTGUG00000007503	GZF1	98	45.274

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000016516	-	99	53.659	ENSAMXG00000029161	-	80	53.659	Astyanax_mexicanus
ENSTGUG00000016516	-	99	60.581	ENSCPBG00000004990	-	100	58.333	Chrysemys_picta_bellii
ENSTGUG00000016516	-	100	59.751	ENSCPBG00000021479	-	83	56.904	Chrysemys_picta_bellii
ENSTGUG00000016516	-	100	61.411	ENSCPBG00000016841	-	93	60.544	Chrysemys_picta_bellii
ENSTGUG00000016516	-	100	60.166	ENSCPBG00000001272	-	73	60.166	Chrysemys_picta_bellii
ENSTGUG00000016516	-	99	62.903	ENSCPBG00000001421	-	99	62.201	Chrysemys_picta_bellii
ENSTGUG00000016516	-	99	61.538	ENSCPBG00000012976	-	93	58.264	Chrysemys_picta_bellii
ENSTGUG00000016516	-	100	59.751	ENSCPBG00000004030	-	81	59.751	Chrysemys_picta_bellii
ENSTGUG00000016516	-	99	54.378	ENSCPBG00000021487	-	69	54.378	Chrysemys_picta_bellii
ENSTGUG00000016516	-	99	60.000	ENSGAGG00000002179	-	98	57.676	Gopherus_agassizii
ENSTGUG00000016516	-	100	58.678	ENSGAGG00000001645	-	63	58.678	Gopherus_agassizii
ENSTGUG00000016516	-	99	56.923	ENSGAGG00000011487	-	77	54.505	Gopherus_agassizii
ENSTGUG00000016516	-	100	60.331	ENSGAGG00000010833	-	84	58.921	Gopherus_agassizii
ENSTGUG00000016516	-	100	56.017	ENSGAGG00000010324	-	70	56.017	Gopherus_agassizii
ENSTGUG00000016516	-	99	55.602	ENSGAGG00000020134	-	65	55.602	Gopherus_agassizii
ENSTGUG00000016516	-	99	57.322	ENSGAGG00000014356	-	75	57.322	Gopherus_agassizii
ENSTGUG00000016516	-	100	57.447	ENSGAGG00000016529	-	93	57.447	Gopherus_agassizii
ENSTGUG00000016516	-	99	53.527	ENSGAGG00000018445	-	78	53.527	Gopherus_agassizii
ENSTGUG00000016516	-	99	61.818	ENSGAGG00000002214	-	82	61.818	Gopherus_agassizii
ENSTGUG00000016516	-	100	59.671	ENSGAGG00000009272	-	98	58.798	Gopherus_agassizii
ENSTGUG00000016516	-	99	61.644	ENSGAGG00000012452	-	67	61.644	Gopherus_agassizii
ENSTGUG00000016516	-	99	57.676	ENSPSIG00000015465	-	73	57.676	Pelodiscus_sinensis
ENSTGUG00000016516	-	99	61.047	ENSPSIG00000002569	-	73	61.047	Pelodiscus_sinensis
ENSTGUG00000016516	-	99	54.630	ENSPSIG00000015216	-	82	54.630	Pelodiscus_sinensis
ENSTGUG00000016516	-	100	53.933	ENSPSIG00000001026	-	90	53.942	Pelodiscus_sinensis
ENSTGUG00000016516	-	100	61.638	ENSPSIG00000012865	-	68	61.638	Pelodiscus_sinensis
ENSTGUG00000016516	-	99	62.762	ENSPSIG00000009893	-	68	62.762	Pelodiscus_sinensis
ENSTGUG00000016516	-	99	51.456	ENSPSIG00000000522	-	86	51.456	Pelodiscus_sinensis