EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000016761 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 24470 bases
Position: chr7_random:410507-434976
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000017068	Rif1_N	PF12231.8	7.2e-77	1	1
ENSTGUP00000017072	Rif1_N	PF12231.8	6e-70	1	1
ENSTGUP00000017079	Rif1_N	PF12231.8	6.6e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000017438	RIF1-203	3312	-	ENSTGUP00000017068	1104 (aa)	-	H1A2F6
ENSTGUT00000017442	RIF1-202	3096	-	ENSTGUP00000017072	1032 (aa)	-	H1A2G0
ENSTGUT00000017449	RIF1-201	3102	-	ENSTGUP00000017079	1034 (aa)	-	H1A2G7

Gene Model

Click here to download ENSTGUG00000016761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000016761's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000016761	RIF1	100	67.339	ENSG00000080345	RIF1	97	66.870	Homo_sapiens
ENSTGUG00000016761	RIF1	95	83.544	ENSCPBG00000025885	RIF1	50	74.640	Chrysemys_picta_bellii
ENSTGUG00000016761	RIF1	100	53.654	ENSGMOG00000003517	rif1	68	52.941	Gadus_morhua
ENSTGUG00000016761	RIF1	92	74.648	ENSGAFG00000017196	rif1	51	54.874	Gambusia_affinis
ENSTGUG00000016761	RIF1	100	77.093	ENSGAGG00000012595	RIF1	53	76.529	Gopherus_agassizii
ENSTGUG00000016761	RIF1	100	54.187	ENSMALG00000016759	rif1	50	54.587	Monopterus_albus
ENSTGUG00000016761	RIF1	100	55.396	ENSONIG00000013657	rif1	51	55.315	Oreochromis_niloticus
ENSTGUG00000016761	RIF1	91	75.735	ENSPSIG00000012517	RIF1	92	75.574	Pelodiscus_sinensis
ENSTGUG00000016761	RIF1	100	50.869	ENSPMGG00000016141	rif1	54	50.588	Periophthalmus_magnuspinnatus
ENSTGUG00000016761	RIF1	100	55.313	ENSPLAG00000017945	rif1	50	55.076	Poecilia_latipinna
ENSTGUG00000016761	RIF1	100	55.258	ENSPREG00000018052	rif1	50	55.375	Poecilia_reticulata
ENSTGUG00000016761	RIF1	100	59.004	ENSSFOG00015021539	rif1	51	58.506	Scleropages_formosus
ENSTGUG00000016761	RIF1	72	63.972	ENSSPAG00000018359	rif1	51	59.509	Stegastes_partitus