EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTGUG00000017539 (Gene tree)
Gene ID
-
Gene Symbol
LSM5
Alias
-
Full Name
LSM5 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Taeniopygia_guttata
Status
putative
Strand
Plus strand
Length
2765 bases
Position
chrZ_random:2723770-2726534
Accession
100190552
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTGUP00000017819LSMPF01423.221.5e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTGUT00000018224-567-ENSTGUP0000001781991 (aa)-B5G480
Gene Model
Click here to download ENSTGUG00000017539's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000017539's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTGUG00000017539LSM58234.667ENSTGUG00000008327LSM37434.667
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTGUG00000017539LSM510096.703ENSG00000106355LSM5100100.000Homo_sapiens
ENSTGUG00000017539LSM59092.683ENSAPOG00000011743LSM510096.774Acanthochromis_polyacanthus
ENSTGUG00000017539LSM510093.407ENSAPOG00000020779LSM510093.407Acanthochromis_polyacanthus
ENSTGUG00000017539LSM510096.703ENSAMEG00000006700LSM510096.703Ailuropoda_melanoleuca
ENSTGUG00000017539LSM59657.471ENSACIG00000019185lsm59857.471Amphilophus_citrinellus
ENSTGUG00000017539LSM510093.407ENSAOCG00000001636lsm510093.407Amphiprion_ocellaris
ENSTGUG00000017539LSM56896.774ENSAPEG00000008201lsm510096.774Amphiprion_percula
ENSTGUG00000017539LSM510093.407ENSAPEG00000008151lsm510093.407Amphiprion_percula
ENSTGUG00000017539LSM59092.683ENSATEG00000020470lsm510058.242Anabas_testudineus
ENSTGUG00000017539LSM581100.000ENSAPLG00000008171LSM5100100.000Anas_platyrhynchos
ENSTGUG00000017539LSM56294.643ENSACAG00000009530LSM59394.643Anolis_carolinensis
ENSTGUG00000017539LSM59993.333ENSANAG00000024192-9493.333Aotus_nancymaae
ENSTGUG00000017539LSM510096.703ENSANAG00000034409-10096.703Aotus_nancymaae
ENSTGUG00000017539LSM510075.824ENSANAG00000037758-10075.824Aotus_nancymaae
ENSTGUG00000017539LSM59694.253ENSACLG00000012891lsm59994.253Astatotilapia_calliptera
ENSTGUG00000017539LSM510082.979ENSAMXG00000035543lsm510082.979Astyanax_mexicanus
ENSTGUG00000017539LSM510096.703ENSBTAG00000002332LSM510096.703Bos_taurus
ENSTGUG00000017539LSM55375.000ENSBTAG00000052014-6375.000Bos_taurus
ENSTGUG00000017539LSM510073.626WBGene00003079lsm-510073.626Caenorhabditis_elegans
ENSTGUG00000017539LSM510096.703ENSCJAG00000047379LSM58186.538Callithrix_jacchus
ENSTGUG00000017539LSM59983.333ENSCJAG00000005678-10083.333Callithrix_jacchus
ENSTGUG00000017539LSM510095.604ENSCAFG00000019261-10095.604Canis_familiaris
ENSTGUG00000017539LSM55588.000ENSCAFG00000030781-5888.000Canis_familiaris
ENSTGUG00000017539LSM510096.703ENSCAFG00020004946LSM510096.703Canis_lupus_dingo
ENSTGUG00000017539LSM58174.324ENSCHIG00000021428-9571.591Capra_hircus
ENSTGUG00000017539LSM510096.703ENSCHIG00000024539LSM510096.703Capra_hircus
ENSTGUG00000017539LSM510094.505ENSCHIG00000004079-10094.505Capra_hircus
ENSTGUG00000017539LSM510096.703ENSTSYG00000006449-10096.703Carlito_syrichta
ENSTGUG00000017539LSM510071.429ENSTSYG00000036637-10071.429Carlito_syrichta
ENSTGUG00000017539LSM510083.516ENSTSYG00000028728-10083.516Carlito_syrichta
ENSTGUG00000017539LSM510078.022ENSTSYG00000026530-9178.022Carlito_syrichta
ENSTGUG00000017539LSM58292.000ENSCAPG00000006980LSM510092.000Cavia_aperea
ENSTGUG00000017539LSM510096.703ENSCPOG00000036386LSM510096.703Cavia_porcellus
ENSTGUG00000017539LSM510095.604ENSCCAG00000000821-10095.604Cebus_capucinus
ENSTGUG00000017539LSM510094.505ENSCCAG00000032123-10094.505Cebus_capucinus
ENSTGUG00000017539LSM510096.703ENSCCAG00000037808-10096.703Cebus_capucinus
ENSTGUG00000017539LSM510078.022ENSCCAG00000032792-10078.022Cebus_capucinus
ENSTGUG00000017539LSM510064.835ENSCCAG00000037334-10064.835Cebus_capucinus
ENSTGUG00000017539LSM59985.556ENSCATG00000014790-9592.727Cercocebus_atys
ENSTGUG00000017539LSM510096.703ENSCATG00000040218LSM5100100.000Cercocebus_atys
ENSTGUG00000017539LSM510080.220ENSCLAG00000005062-9080.220Chinchilla_lanigera
ENSTGUG00000017539LSM510096.703ENSCLAG00000000202LSM510096.703Chinchilla_lanigera
ENSTGUG00000017539LSM58296.000ENSCHOG00000005335LSM59996.000Choloepus_hoffmanni
ENSTGUG00000017539LSM510096.703ENSCPBG00000013685LSM510096.703Chrysemys_picta_bellii
ENSTGUG00000017539LSM510086.813ENSCING00000020625-10086.813Ciona_intestinalis
ENSTGUG00000017539LSM59588.372ENSCSAVG00000001439-9888.372Ciona_savignyi
ENSTGUG00000017539LSM510096.703ENSCANG00000039909LSM5100100.000Colobus_angolensis_palliatus
ENSTGUG00000017539LSM510096.703ENSCGRG00001015461Lsm510096.703Cricetulus_griseus_chok1gshd
ENSTGUG00000017539LSM582100.000ENSCGRG00000007677Lsm5100100.000Cricetulus_griseus_crigri
ENSTGUG00000017539LSM510057.143ENSCSEG00000015286lsm510057.143Cynoglossus_semilaevis
ENSTGUG00000017539LSM510093.407ENSCVAG00000004262lsm510093.407Cyprinodon_variegatus
ENSTGUG00000017539LSM510093.407ENSDARG00000071573lsm510096.774Danio_rerio
ENSTGUG00000017539LSM59686.207ENSDNOG00000049495-9686.207Dasypus_novemcinctus
ENSTGUG00000017539LSM510096.703ENSDNOG00000034958LSM510096.703Dasypus_novemcinctus
ENSTGUG00000017539LSM510096.703ENSDORG00000009422Lsm510096.703Dipodomys_ordii
ENSTGUG00000017539LSM59582.558FBgn0035675CG66109582.558Drosophila_melanogaster
ENSTGUG00000017539LSM59864.045ENSETEG00000000777-9964.045Echinops_telfairi
ENSTGUG00000017539LSM58181.081ENSETEG00000016074-9881.081Echinops_telfairi
ENSTGUG00000017539LSM510096.703ENSETEG00000018068LSM510096.703Echinops_telfairi
ENSTGUG00000017539LSM510078.022ENSETEG00000010651-10078.022Echinops_telfairi
ENSTGUG00000017539LSM59974.444ENSETEG00000001469-9974.444Echinops_telfairi
ENSTGUG00000017539LSM510089.011ENSEBUG00000008540lsm510089.011Eptatretus_burgeri
ENSTGUG00000017539LSM510096.703ENSEASG00005003500LSM510096.703Equus_asinus_asinus
ENSTGUG00000017539LSM510082.418ENSECAG00000018445LSM510082.418Equus_caballus
ENSTGUG00000017539LSM56394.737ENSEEUG00000004102LSM59594.737Erinaceus_europaeus
ENSTGUG00000017539LSM510093.407ENSELUG00000007792lsm510093.407Esox_lucius
ENSTGUG00000017539LSM510096.703ENSFCAG00000000230LSM510096.703Felis_catus
ENSTGUG00000017539LSM584100.000ENSFALG00000001892LSM592100.000Ficedula_albicollis
ENSTGUG00000017539LSM59068.293ENSFDAG00000008685-9768.293Fukomys_damarensis
ENSTGUG00000017539LSM510096.703ENSFDAG00000008767LSM510096.703Fukomys_damarensis
ENSTGUG00000017539LSM59975.824ENSFHEG00000004011lsm59875.824Fundulus_heteroclitus
ENSTGUG00000017539LSM59993.333ENSGMOG00000018235lsm510093.333Gadus_morhua
ENSTGUG00000017539LSM510096.703ENSGALG00000041625LSM510096.703Gallus_gallus
ENSTGUG00000017539LSM56896.774ENSGAFG00000016824lsm510096.774Gambusia_affinis
ENSTGUG00000017539LSM510093.407ENSGACG00000005528lsm510093.407Gasterosteus_aculeatus
ENSTGUG00000017539LSM510096.703ENSGAGG00000015593LSM510096.703Gopherus_agassizii
ENSTGUG00000017539LSM510096.703ENSGGOG00000043469LSM510096.703Gorilla_gorilla
ENSTGUG00000017539LSM59694.253ENSHBUG00000013773lsm59994.253Haplochromis_burtoni
ENSTGUG00000017539LSM510096.703ENSHGLG00000011765LSM510096.703Heterocephalus_glaber_female
ENSTGUG00000017539LSM510093.407ENSHGLG00100015610LSM510093.407Heterocephalus_glaber_male
ENSTGUG00000017539LSM510057.143ENSHCOG00000008288lsm510057.143Hippocampus_comes
ENSTGUG00000017539LSM510094.505ENSIPUG00000021095LSM510094.505Ictalurus_punctatus
ENSTGUG00000017539LSM510096.703ENSSTOG00000012662LSM510096.703Ictidomys_tridecemlineatus
ENSTGUG00000017539LSM59282.558ENSSTOG00000033886-9782.558Ictidomys_tridecemlineatus
ENSTGUG00000017539LSM510094.505ENSJJAG00000012145-10094.505Jaculus_jaculus
ENSTGUG00000017539LSM58787.342ENSJJAG00000004475-10087.342Jaculus_jaculus
ENSTGUG00000017539LSM510068.132ENSJJAG00000016144-9268.132Jaculus_jaculus
ENSTGUG00000017539LSM510092.308ENSKMAG00000021861lsm510092.308Kryptolebias_marmoratus
ENSTGUG00000017539LSM56278.571ENSLBEG00000017379lsm59278.571Labrus_bergylta
ENSTGUG00000017539LSM510085.714ENSLBEG00000009235LSM57085.714Labrus_bergylta
ENSTGUG00000017539LSM510093.407ENSLACG00000022448LSM510093.407Latimeria_chalumnae
ENSTGUG00000017539LSM510093.407ENSLOCG00000012903lsm510093.407Lepisosteus_oculatus
ENSTGUG00000017539LSM510096.703ENSLAFG00000029579LSM510096.703Loxodonta_africana
ENSTGUG00000017539LSM510071.429ENSLAFG00000027938-10071.429Loxodonta_africana
ENSTGUG00000017539LSM55391.667ENSMFAG00000031187-8191.667Macaca_fascicularis
ENSTGUG00000017539LSM510096.703ENSMFAG00000038508LSM510096.703Macaca_fascicularis
ENSTGUG00000017539LSM510094.505ENSMFAG00000030152-10094.505Macaca_fascicularis
ENSTGUG00000017539LSM510094.505ENSMMUG00000030131-10094.505Macaca_mulatta
ENSTGUG00000017539LSM55786.538ENSMMUG00000045129-8186.538Macaca_mulatta
ENSTGUG00000017539LSM59986.667ENSMMUG00000039822-10086.667Macaca_mulatta
ENSTGUG00000017539LSM510094.505ENSMNEG00000037935-10094.505Macaca_nemestrina
ENSTGUG00000017539LSM510096.703ENSMNEG00000015331LSM5100100.000Macaca_nemestrina
ENSTGUG00000017539LSM510096.703ENSMLEG00000024945LSM510096.703Mandrillus_leucophaeus
ENSTGUG00000017539LSM59885.393ENSMLEG00000034037-10085.393Mandrillus_leucophaeus
ENSTGUG00000017539LSM510089.011ENSMAMG00000012869lsm510089.011Mastacembelus_armatus
ENSTGUG00000017539LSM59694.253ENSMZEG00005019554lsm59994.253Maylandia_zebra
ENSTGUG00000017539LSM510096.703ENSMGAG00000012117LSM510096.703Meleagris_gallopavo
ENSTGUG00000017539LSM510096.703ENSMAUG00000012222Lsm510096.703Mesocricetus_auratus
ENSTGUG00000017539LSM510095.604ENSMAUG00000008132-10095.604Mesocricetus_auratus
ENSTGUG00000017539LSM510096.703ENSMICG00000005353LSM510096.703Microcebus_murinus
ENSTGUG00000017539LSM59974.444ENSMICG00000033928-9674.444Microcebus_murinus
ENSTGUG00000017539LSM510096.703ENSMOCG00000012018Lsm510096.703Microtus_ochrogaster
ENSTGUG00000017539LSM58497.368ENSMMOG00000004026lsm58797.368Mola_mola
ENSTGUG00000017539LSM568100.000ENSMODG00000013274-100100.000Monodelphis_domestica
ENSTGUG00000017539LSM56891.935ENSMALG00000010343lsm510091.935Monopterus_albus
ENSTGUG00000017539LSM510096.703MGP_CAROLIEiJ_G0028421Lsm510096.703Mus_caroli
ENSTGUG00000017539LSM510096.703ENSMUSG00000091625Lsm510096.703Mus_musculus
ENSTGUG00000017539LSM510096.703MGP_PahariEiJ_G0022171Lsm510096.703Mus_pahari
ENSTGUG00000017539LSM510096.703MGP_SPRETEiJ_G0029423Lsm510096.703Mus_spretus
ENSTGUG00000017539LSM510096.703ENSMLUG00000017028LSM510096.703Myotis_lucifugus
ENSTGUG00000017539LSM510096.703ENSNGAG00000024142Lsm510096.703Nannospalax_galili
ENSTGUG00000017539LSM59975.556ENSNGAG00000022569-9675.556Nannospalax_galili
ENSTGUG00000017539LSM510083.871ENSNGAG00000017707-10083.871Nannospalax_galili
ENSTGUG00000017539LSM56396.491ENSNBRG00000011386lsm57696.491Neolamprologus_brichardi
ENSTGUG00000017539LSM510096.703ENSNLEG00000015268LSM510096.703Nomascus_leucogenys
ENSTGUG00000017539LSM582100.000ENSOPRG00000002443LSM5100100.000Ochotona_princeps
ENSTGUG00000017539LSM510096.703ENSODEG00000008258-10096.703Octodon_degus
ENSTGUG00000017539LSM510096.703ENSODEG00000019072-10096.703Octodon_degus
ENSTGUG00000017539LSM58261.333ENSOANG00000014540-10061.333Ornithorhynchus_anatinus
ENSTGUG00000017539LSM510096.703ENSOCUG00000029043LSM510096.703Oryctolagus_cuniculus
ENSTGUG00000017539LSM510092.308ENSORLG00000027725lsm55892.308Oryzias_latipes
ENSTGUG00000017539LSM59689.655ENSORLG00020003019lsm58689.655Oryzias_latipes_hni
ENSTGUG00000017539LSM510092.308ENSORLG00015003338lsm510092.308Oryzias_latipes_hsok
ENSTGUG00000017539LSM510093.407ENSOMEG00000001078lsm510093.407Oryzias_melastigma
ENSTGUG00000017539LSM510096.703ENSOGAG00000013892LSM510096.703Otolemur_garnettii
ENSTGUG00000017539LSM510096.703ENSOARG00000006944LSM510096.703Ovis_aries
ENSTGUG00000017539LSM510096.703ENSPPAG00000003697-10096.703Pan_paniscus
ENSTGUG00000017539LSM510096.703ENSPPRG00000002550LSM510096.703Panthera_pardus
ENSTGUG00000017539LSM510096.703ENSPTIG00000015604LSM510096.703Panthera_tigris_altaica
ENSTGUG00000017539LSM510096.703ENSPTRG00000019057LSM510096.703Pan_troglodytes
ENSTGUG00000017539LSM510080.220ENSPTRG00000049488-10082.418Pan_troglodytes
ENSTGUG00000017539LSM510093.407ENSPANG00000033477-10093.407Papio_anubis
ENSTGUG00000017539LSM510096.703ENSPANG00000032179-10096.703Papio_anubis
ENSTGUG00000017539LSM59986.667ENSPANG00000032538-10086.667Papio_anubis
ENSTGUG00000017539LSM510093.407ENSPKIG00000011910lsm510093.407Paramormyrops_kingsleyae
ENSTGUG00000017539LSM581100.000ENSPSIG00000014796LSM5100100.000Pelodiscus_sinensis
ENSTGUG00000017539LSM56896.774ENSPMGG00000011699lsm510096.774Periophthalmus_magnuspinnatus
ENSTGUG00000017539LSM510070.330ENSPEMG00000022375-10070.330Peromyscus_maniculatus_bairdii
ENSTGUG00000017539LSM55293.617ENSPEMG00000019994-8093.617Peromyscus_maniculatus_bairdii
ENSTGUG00000017539LSM510093.407ENSPFOG00000001433lsm510093.407Poecilia_formosa
ENSTGUG00000017539LSM510093.407ENSPLAG00000009665lsm510093.407Poecilia_latipinna
ENSTGUG00000017539LSM510093.407ENSPMEG00000022265lsm510093.407Poecilia_mexicana
ENSTGUG00000017539LSM56896.774ENSPREG00000022452lsm510096.774Poecilia_reticulata
ENSTGUG00000017539LSM510093.407ENSPPYG00000017661LSM510093.407Pongo_abelii
ENSTGUG00000017539LSM58996.296ENSPCAG00000013740LSM510096.296Procavia_capensis
ENSTGUG00000017539LSM510096.703ENSPVAG00000009786LSM510096.703Pteropus_vampyrus
ENSTGUG00000017539LSM59694.253ENSPNYG00000022236lsm59994.253Pundamilia_nyererei
ENSTGUG00000017539LSM510094.505ENSPNAG00000001887lsm510094.505Pygocentrus_nattereri
ENSTGUG00000017539LSM510096.703ENSRNOG00000042126Lsm510096.703Rattus_norvegicus
ENSTGUG00000017539LSM510092.391ENSRNOG00000027305AABR07065089.110092.391Rattus_norvegicus
ENSTGUG00000017539LSM510096.703ENSRBIG00000027803-100100.000Rhinopithecus_bieti
ENSTGUG00000017539LSM510095.604ENSRBIG00000024431-10095.604Rhinopithecus_bieti
ENSTGUG00000017539LSM510096.703ENSRBIG00000030340-10096.703Rhinopithecus_bieti
ENSTGUG00000017539LSM510096.703ENSRBIG00000030714-10096.703Rhinopithecus_bieti
ENSTGUG00000017539LSM510096.703ENSRROG00000042782-100100.000Rhinopithecus_roxellana
ENSTGUG00000017539LSM510096.703ENSRROG00000004655-10096.703Rhinopithecus_roxellana
ENSTGUG00000017539LSM510096.703ENSRROG00000023884-10096.703Rhinopithecus_roxellana
ENSTGUG00000017539LSM58551.220YER146W-8851.220Saccharomyces_cerevisiae
ENSTGUG00000017539LSM510096.703ENSSBOG00000012312LSM510096.703Saimiri_boliviensis_boliviensis
ENSTGUG00000017539LSM510074.725ENSSBOG00000034794-10074.725Saimiri_boliviensis_boliviensis
ENSTGUG00000017539LSM510094.505ENSSBOG00000019124-10094.505Saimiri_boliviensis_boliviensis
ENSTGUG00000017539LSM510093.407ENSSFOG00015010099lsm510093.407Scleropages_formosus
ENSTGUG00000017539LSM510058.242ENSSMAG00000007895lsm510058.242Scophthalmus_maximus
ENSTGUG00000017539LSM56896.774ENSSDUG00000010762lsm510096.774Seriola_dumerili
ENSTGUG00000017539LSM510093.407ENSSLDG00000025242lsm510093.407Seriola_lalandi_dorsalis
ENSTGUG00000017539LSM58579.221ENSSLDG00000008014-9279.221Seriola_lalandi_dorsalis
ENSTGUG00000017539LSM510068.132ENSSARG00000003330LSM510068.132Sorex_araneus
ENSTGUG00000017539LSM510094.505ENSSPUG00000002690LSM510098.387Sphenodon_punctatus
ENSTGUG00000017539LSM510058.242ENSSPAG00000005435lsm510058.242Stegastes_partitus
ENSTGUG00000017539LSM510096.703ENSSSCG00000026064-10096.703Sus_scrofa
ENSTGUG00000017539LSM57685.507ENSSSCG00000029661-9685.507Sus_scrofa
ENSTGUG00000017539LSM58686.747ENSTRUG00000017749lsm56486.747Takifugu_rubripes
ENSTGUG00000017539LSM59694.253ENSTNIG00000008695lsm59994.253Tetraodon_nigroviridis
ENSTGUG00000017539LSM510096.703ENSTBEG00000004876LSM510096.703Tupaia_belangeri
ENSTGUG00000017539LSM510096.703ENSTTRG00000004237LSM510096.703Tursiops_truncatus
ENSTGUG00000017539LSM55786.538ENSUAMG00000009786LSM56886.538Ursus_americanus
ENSTGUG00000017539LSM510095.604ENSUMAG00000002625LSM56595.604Ursus_maritimus
ENSTGUG00000017539LSM510096.703ENSVPAG00000009985LSM510096.703Vicugna_pacos
ENSTGUG00000017539LSM510096.703ENSVVUG00000021311LSM510096.703Vulpes_vulpes
ENSTGUG00000017539LSM59093.902ENSXETG00000026465lsm510093.902Xenopus_tropicalis
ENSTGUG00000017539LSM56896.774ENSXCOG00000015348lsm510096.774Xiphophorus_couchianus
ENSTGUG00000017539LSM510093.407ENSXMAG00000029988lsm510093.407Xiphophorus_maculatus

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