EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000018349 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 324 bases
Position: chrUn:131629593-131629916
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000018023	zf-C2H2	PF00096.26	1.2e-29	1	4
ENSTGUP00000018023	zf-C2H2	PF00096.26	1.2e-29	2	4
ENSTGUP00000018023	zf-C2H2	PF00096.26	1.2e-29	3	4
ENSTGUP00000018023	zf-C2H2	PF00096.26	1.2e-29	4	4
ENSTGUP00000018023	zf-met	PF12874.7	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000018836	-	324	-	ENSTGUP00000018023	108 (aa)	-	H1A557

Gene Model

Click here to download ENSTGUG00000018349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000018349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000018349	-	100	42.056	ENSTGUG00000002589	ZBTB48	63	42.056
ENSTGUG00000018349	-	100	72.222	ENSTGUG00000018327	-	100	72.222
ENSTGUG00000018349	-	100	69.444	ENSTGUG00000016516	-	99	69.444
ENSTGUG00000018349	-	100	72.222	ENSTGUG00000015090	-	99	72.222
ENSTGUG00000018349	-	100	81.481	ENSTGUG00000018254	-	98	81.481
ENSTGUG00000018349	-	100	46.729	ENSTGUG00000001920	PRDM5	65	46.729
ENSTGUG00000018349	-	100	68.817	ENSTGUG00000018445	-	95	68.817
ENSTGUG00000018349	-	100	70.370	ENSTGUG00000015260	-	99	70.370
ENSTGUG00000018349	-	100	70.370	ENSTGUG00000015549	-	95	70.370
ENSTGUG00000018349	-	100	69.444	ENSTGUG00000013736	-	99	69.444
ENSTGUG00000018349	-	100	71.296	ENSTGUG00000016850	-	98	71.296
ENSTGUG00000018349	-	100	40.952	ENSTGUG00000010006	ZNF710	99	40.952
ENSTGUG00000018349	-	100	56.250	ENSTGUG00000009074	ZNF236	51	56.250
ENSTGUG00000018349	-	100	71.296	ENSTGUG00000014888	-	99	71.296
ENSTGUG00000018349	-	100	51.220	ENSTGUG00000017059	-	98	51.220
ENSTGUG00000018349	-	100	72.222	ENSTGUG00000014614	-	98	72.222
ENSTGUG00000018349	-	100	68.519	ENSTGUG00000018518	-	98	68.519
ENSTGUG00000018349	-	98	37.736	ENSTGUG00000008724	SNAI1	52	40.260
ENSTGUG00000018349	-	100	50.926	ENSTGUG00000004796	ZNF319	93	50.926
ENSTGUG00000018349	-	100	71.296	ENSTGUG00000018439	-	100	71.296
ENSTGUG00000018349	-	100	54.000	ENSTGUG00000005282	-	99	54.000
ENSTGUG00000018349	-	100	40.952	ENSTGUG00000015149	-	64	40.952
ENSTGUG00000018349	-	100	78.704	ENSTGUG00000015210	-	100	78.704
ENSTGUG00000018349	-	100	71.296	ENSTGUG00000016781	-	99	71.296
ENSTGUG00000018349	-	100	87.037	ENSTGUG00000014079	-	100	87.037
ENSTGUG00000018349	-	96	41.346	ENSTGUG00000010914	-	50	41.346
ENSTGUG00000018349	-	100	88.889	ENSTGUG00000018374	-	98	88.889
ENSTGUG00000018349	-	100	41.250	ENSTGUG00000016690	-	93	41.250
ENSTGUG00000018349	-	100	42.667	ENSTGUG00000006801	SCRT2	58	42.667
ENSTGUG00000018349	-	100	86.111	ENSTGUG00000014292	-	98	86.111
ENSTGUG00000018349	-	100	47.458	ENSTGUG00000007503	GZF1	94	47.458
ENSTGUG00000018349	-	100	67.470	ENSTGUG00000018542	-	99	67.470
ENSTGUG00000018349	-	100	77.778	ENSTGUG00000018385	-	99	77.778
ENSTGUG00000018349	-	100	66.038	ENSTGUG00000018351	-	99	66.038
ENSTGUG00000018349	-	100	81.481	ENSTGUG00000016220	-	97	81.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000018349	-	100	55.319	ENSAMXG00000029161	-	81	55.319	Astyanax_mexicanus
ENSTGUG00000018349	-	100	66.667	ENSCPBG00000004990	-	100	63.889	Chrysemys_picta_bellii
ENSTGUG00000018349	-	100	63.889	ENSCPBG00000021479	-	84	63.889	Chrysemys_picta_bellii
ENSTGUG00000018349	-	100	64.815	ENSCPBG00000001421	-	99	62.069	Chrysemys_picta_bellii
ENSTGUG00000018349	-	100	69.149	ENSCPBG00000012976	-	93	66.667	Chrysemys_picta_bellii
ENSTGUG00000018349	-	100	66.667	ENSCPBG00000016841	-	90	63.793	Chrysemys_picta_bellii
ENSTGUG00000018349	-	100	61.111	ENSCPBG00000021487	-	69	61.111	Chrysemys_picta_bellii
ENSTGUG00000018349	-	100	64.000	ENSCPBG00000001272	-	73	63.889	Chrysemys_picta_bellii
ENSTGUG00000018349	-	100	68.807	ENSCPBG00000004030	-	76	68.519	Chrysemys_picta_bellii
ENSTGUG00000018349	-	100	61.111	ENSGAGG00000011487	-	77	61.111	Gopherus_agassizii
ENSTGUG00000018349	-	100	68.519	ENSGAGG00000012452	-	61	68.519	Gopherus_agassizii
ENSTGUG00000018349	-	100	62.963	ENSGAGG00000009272	-	97	61.446	Gopherus_agassizii
ENSTGUG00000018349	-	100	63.889	ENSGAGG00000016529	-	84	63.889	Gopherus_agassizii
ENSTGUG00000018349	-	100	67.593	ENSGAGG00000014356	-	74	67.593	Gopherus_agassizii
ENSTGUG00000018349	-	100	66.667	ENSGAGG00000010833	-	83	66.667	Gopherus_agassizii
ENSTGUG00000018349	-	100	64.815	ENSGAGG00000001645	-	62	64.815	Gopherus_agassizii
ENSTGUG00000018349	-	100	60.185	ENSGAGG00000010324	-	69	60.185	Gopherus_agassizii
ENSTGUG00000018349	-	100	62.963	ENSGAGG00000002179	-	93	62.037	Gopherus_agassizii
ENSTGUG00000018349	-	100	59.259	ENSGAGG00000020134	-	61	59.259	Gopherus_agassizii
ENSTGUG00000018349	-	100	66.667	ENSGAGG00000002214	-	82	66.667	Gopherus_agassizii
ENSTGUG00000018349	-	100	60.185	ENSGAGG00000018445	-	78	60.185	Gopherus_agassizii
ENSTGUG00000018349	-	100	67.593	ENSPSIG00000009893	-	61	67.593	Pelodiscus_sinensis
ENSTGUG00000018349	-	100	64.815	ENSPSIG00000002569	-	73	64.815	Pelodiscus_sinensis
ENSTGUG00000018349	-	100	59.649	ENSPSIG00000000522	-	86	59.649	Pelodiscus_sinensis
ENSTGUG00000018349	-	100	68.519	ENSPSIG00000012865	-	69	83.871	Pelodiscus_sinensis
ENSTGUG00000018349	-	100	68.235	ENSPSIG00000015216	-	74	68.235	Pelodiscus_sinensis
ENSTGUG00000018349	-	100	63.889	ENSPSIG00000015465	-	72	63.889	Pelodiscus_sinensis
ENSTGUG00000018349	-	100	71.084	ENSPSIG00000001026	-	98	71.084	Pelodiscus_sinensis