EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000018385 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 561 bases
Position: chrUn:170867676-170868236
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000018026	zf-C2H2	PF00096.26	1.8e-46	1	6
ENSTGUP00000018026	zf-C2H2	PF00096.26	1.8e-46	2	6
ENSTGUP00000018026	zf-C2H2	PF00096.26	1.8e-46	3	6
ENSTGUP00000018026	zf-C2H2	PF00096.26	1.8e-46	4	6
ENSTGUP00000018026	zf-C2H2	PF00096.26	1.8e-46	5	6
ENSTGUP00000018026	zf-C2H2	PF00096.26	1.8e-46	6	6
ENSTGUP00000018026	zf-met	PF12874.7	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000018816	-	561	-	ENSTGUP00000018026	187 (aa)	-	H1A560

Gene Model

Click here to download ENSTGUG00000018385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000018385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000018385	-	100	51.087	ENSTGUG00000009074	ZNF236	60	51.087
ENSTGUG00000018385	-	99	38.922	ENSTGUG00000015149	-	64	38.922
ENSTGUG00000018385	-	100	82.447	ENSTGUG00000014079	-	100	82.447
ENSTGUG00000018385	-	100	67.914	ENSTGUG00000016781	-	99	67.914
ENSTGUG00000018385	-	100	70.588	ENSTGUG00000016516	-	99	70.588
ENSTGUG00000018385	-	100	77.622	ENSTGUG00000018254	-	100	77.622
ENSTGUG00000018385	-	99	43.902	ENSTGUG00000016690	-	98	43.902
ENSTGUG00000018385	-	100	68.750	ENSTGUG00000018518	-	100	68.750
ENSTGUG00000018385	-	100	37.888	ENSTGUG00000010006	ZNF710	99	37.888
ENSTGUG00000018385	-	93	72.000	ENSTGUG00000018327	-	100	72.000
ENSTGUG00000018385	-	100	68.841	ENSTGUG00000018439	-	100	68.841
ENSTGUG00000018385	-	100	43.434	ENSTGUG00000008724	SNAI1	52	43.434
ENSTGUG00000018385	-	100	68.984	ENSTGUG00000014614	-	99	68.984
ENSTGUG00000018385	-	100	71.123	ENSTGUG00000014888	-	99	71.123
ENSTGUG00000018385	-	100	62.500	ENSTGUG00000015260	-	100	63.000
ENSTGUG00000018385	-	100	46.774	ENSTGUG00000004796	ZNF319	93	46.774
ENSTGUG00000018385	-	99	45.455	ENSTGUG00000010914	-	51	45.455
ENSTGUG00000018385	-	99	46.774	ENSTGUG00000005282	-	100	46.988
ENSTGUG00000018385	-	100	47.253	ENSTGUG00000007503	GZF1	98	47.253
ENSTGUG00000018385	-	100	66.242	ENSTGUG00000015549	-	100	66.242
ENSTGUG00000018385	-	100	69.461	ENSTGUG00000018374	-	99	69.461
ENSTGUG00000018385	-	100	69.519	ENSTGUG00000013736	-	99	69.519
ENSTGUG00000018385	-	100	75.694	ENSTGUG00000014292	-	99	75.694
ENSTGUG00000018385	-	98	36.047	ENSTGUG00000014153	-	69	36.047
ENSTGUG00000018385	-	100	64.968	ENSTGUG00000015090	-	100	64.968
ENSTGUG00000018385	-	100	72.289	ENSTGUG00000018542	-	100	72.289
ENSTGUG00000018385	-	100	44.304	ENSTGUG00000001920	PRDM5	78	44.304
ENSTGUG00000018385	-	100	63.277	ENSTGUG00000018445	-	95	63.277
ENSTGUG00000018385	-	99	44.231	ENSTGUG00000002589	ZBTB48	63	44.231
ENSTGUG00000018385	-	100	68.519	ENSTGUG00000018351	-	100	68.519
ENSTGUG00000018385	-	100	94.118	ENSTGUG00000015210	-	100	94.118
ENSTGUG00000018385	-	100	40.458	ENSTGUG00000006801	SCRT2	60	40.458
ENSTGUG00000018385	-	100	67.914	ENSTGUG00000016850	-	99	67.914
ENSTGUG00000018385	-	100	73.248	ENSTGUG00000016220	-	100	77.005
ENSTGUG00000018385	-	99	77.778	ENSTGUG00000018349	-	100	77.778
ENSTGUG00000018385	-	100	54.430	ENSTGUG00000017059	-	99	54.430

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000018385	-	99	54.286	ENSACLG00000020975	-	85	50.256	Astatotilapia_calliptera
ENSTGUG00000018385	-	100	60.963	ENSAMXG00000017609	-	73	60.963	Astyanax_mexicanus
ENSTGUG00000018385	-	99	46.774	ENSEBUG00000005258	-	82	46.774	Eptatretus_burgeri
ENSTGUG00000018385	-	100	50.538	ENSEBUG00000010952	-	71	50.538	Eptatretus_burgeri
ENSTGUG00000018385	-	100	51.376	ENSEBUG00000009208	-	58	51.376	Eptatretus_burgeri
ENSTGUG00000018385	-	100	65.241	ENSGAGG00000001387	-	65	65.241	Gopherus_agassizii
ENSTGUG00000018385	-	100	62.346	ENSPCIG00000018955	-	96	62.346	Phascolarctos_cinereus
ENSTGUG00000018385	-	100	61.963	ENSSHAG00000014216	-	86	61.963	Sarcophilus_harrisii
ENSTGUG00000018385	-	100	57.219	ENSUMAG00000019336	-	97	57.219	Ursus_maritimus