EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000018542 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 255 bases
Position: chrUn:124286206-124286460
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000018027	zf-C2H2	PF00096.26	5.2e-16	1	2
ENSTGUP00000018027	zf-C2H2	PF00096.26	5.2e-16	2	2
ENSTGUP00000018027	zf-met	PF12874.7	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000018950	-	255	-	ENSTGUP00000018027	85 (aa)	-	H1A561

Gene Model

Click here to download ENSTGUG00000018542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000018542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000018542	-	99	53.012	ENSTGUG00000006060	GFI1	50	53.012
ENSTGUG00000018542	-	100	92.857	ENSTGUG00000016516	-	99	92.857
ENSTGUG00000018542	-	100	75.294	ENSTGUG00000015090	-	99	75.294
ENSTGUG00000018542	-	100	73.494	ENSTGUG00000016220	-	100	73.494
ENSTGUG00000018542	-	100	51.807	ENSTGUG00000005282	-	99	51.807
ENSTGUG00000018542	-	100	88.095	ENSTGUG00000016850	-	99	88.095
ENSTGUG00000018542	-	98	46.154	ENSTGUG00000000271	-	61	46.154
ENSTGUG00000018542	-	100	74.699	ENSTGUG00000014079	-	100	74.699
ENSTGUG00000018542	-	100	77.647	ENSTGUG00000015260	-	96	77.647
ENSTGUG00000018542	-	100	40.476	ENSTGUG00000015149	-	65	40.000
ENSTGUG00000018542	-	100	92.857	ENSTGUG00000016781	-	99	92.857
ENSTGUG00000018542	-	100	75.000	ENSTGUG00000018254	-	99	75.000
ENSTGUG00000018542	-	100	70.238	ENSTGUG00000014292	-	99	70.238
ENSTGUG00000018542	-	100	88.095	ENSTGUG00000018518	-	100	88.095
ENSTGUG00000018542	-	100	44.444	ENSTGUG00000006801	SCRT2	60	44.444
ENSTGUG00000018542	-	99	92.105	ENSTGUG00000018327	-	100	92.105
ENSTGUG00000018542	-	100	47.059	ENSTGUG00000002589	ZBTB48	58	47.059
ENSTGUG00000018542	-	100	50.000	ENSTGUG00000001920	PRDM5	56	50.000
ENSTGUG00000018542	-	100	96.471	ENSTGUG00000018445	-	95	96.471
ENSTGUG00000018542	-	100	49.383	ENSTGUG00000004796	ZNF319	84	49.383
ENSTGUG00000018542	-	100	67.470	ENSTGUG00000018374	-	99	67.470
ENSTGUG00000018542	-	99	56.944	ENSTGUG00000017059	-	99	56.944
ENSTGUG00000018542	-	100	90.588	ENSTGUG00000014888	-	99	90.588
ENSTGUG00000018542	-	100	72.941	ENSTGUG00000015210	-	99	72.941
ENSTGUG00000018542	-	100	69.412	ENSTGUG00000018439	-	100	69.412
ENSTGUG00000018542	-	100	41.463	ENSTGUG00000010006	ZNF710	77	41.463
ENSTGUG00000018542	-	100	70.588	ENSTGUG00000015549	-	100	70.588
ENSTGUG00000018542	-	99	67.470	ENSTGUG00000018349	-	100	67.470
ENSTGUG00000018542	-	100	95.294	ENSTGUG00000013736	-	92	95.294
ENSTGUG00000018542	-	100	89.412	ENSTGUG00000014614	-	98	89.412
ENSTGUG00000018542	-	100	88.235	ENSTGUG00000018351	-	99	88.235
ENSTGUG00000018542	-	99	40.299	ENSTGUG00000016690	-	86	40.299
ENSTGUG00000018542	-	100	72.289	ENSTGUG00000018385	-	100	72.289
ENSTGUG00000018542	-	100	55.422	ENSTGUG00000007503	GZF1	78	55.422

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000018542	-	100	56.410	ENSAMXG00000029161	-	73	56.410	Astyanax_mexicanus
ENSTGUG00000018542	-	99	60.714	ENSCPBG00000021479	-	83	59.524	Chrysemys_picta_bellii
ENSTGUG00000018542	-	100	65.333	ENSCPBG00000016841	-	95	62.025	Chrysemys_picta_bellii
ENSTGUG00000018542	-	100	61.538	ENSCPBG00000021487	-	69	61.538	Chrysemys_picta_bellii
ENSTGUG00000018542	-	100	66.667	ENSCPBG00000004990	-	100	65.385	Chrysemys_picta_bellii
ENSTGUG00000018542	-	99	61.446	ENSCPBG00000001272	-	73	61.446	Chrysemys_picta_bellii
ENSTGUG00000018542	-	100	66.250	ENSCPBG00000004030	-	78	66.250	Chrysemys_picta_bellii
ENSTGUG00000018542	-	100	66.667	ENSCPBG00000001421	-	98	61.905	Chrysemys_picta_bellii
ENSTGUG00000018542	-	100	62.791	ENSCPBG00000012976	-	93	63.095	Chrysemys_picta_bellii
ENSTGUG00000018542	-	99	60.714	ENSGAGG00000016529	-	83	60.714	Gopherus_agassizii
ENSTGUG00000018542	-	100	62.500	ENSGAGG00000010833	-	83	62.500	Gopherus_agassizii
ENSTGUG00000018542	-	99	58.333	ENSGAGG00000020134	-	61	58.333	Gopherus_agassizii
ENSTGUG00000018542	-	100	65.476	ENSGAGG00000002214	-	81	65.476	Gopherus_agassizii
ENSTGUG00000018542	-	99	60.714	ENSGAGG00000011487	-	76	60.714	Gopherus_agassizii
ENSTGUG00000018542	-	100	61.905	ENSGAGG00000001645	-	62	61.905	Gopherus_agassizii
ENSTGUG00000018542	-	100	57.831	ENSGAGG00000014356	-	74	57.831	Gopherus_agassizii
ENSTGUG00000018542	-	100	59.524	ENSGAGG00000010324	-	70	59.524	Gopherus_agassizii
ENSTGUG00000018542	-	99	65.854	ENSGAGG00000009272	-	97	64.286	Gopherus_agassizii
ENSTGUG00000018542	-	99	64.286	ENSGAGG00000018445	-	78	64.286	Gopherus_agassizii
ENSTGUG00000018542	-	100	64.706	ENSGAGG00000002179	-	93	64.706	Gopherus_agassizii
ENSTGUG00000018542	-	100	64.286	ENSGAGG00000012452	-	67	64.286	Gopherus_agassizii
ENSTGUG00000018542	-	100	65.060	ENSPSIG00000012865	-	69	65.060	Pelodiscus_sinensis
ENSTGUG00000018542	-	100	63.095	ENSPSIG00000015465	-	74	63.095	Pelodiscus_sinensis
ENSTGUG00000018542	-	99	63.095	ENSPSIG00000002569	-	72	63.095	Pelodiscus_sinensis
ENSTGUG00000018542	-	99	66.667	ENSPSIG00000009893	-	65	66.667	Pelodiscus_sinensis
ENSTGUG00000018542	-	99	61.644	ENSPSIG00000015216	-	75	61.644	Pelodiscus_sinensis
ENSTGUG00000018542	-	100	63.529	ENSPSIG00000001026	-	90	63.529	Pelodiscus_sinensis
ENSTGUG00000018542	-	99	58.904	ENSPSIG00000000522	-	84	58.904	Pelodiscus_sinensis