EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000000058 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2375 bases
Position: chr7:10219577-10221951
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000000168	RRM_5	PF13893.6	7.8e-11	1	2
ENSTNIP00000000168	RRM_5	PF13893.6	7.8e-11	2	2
ENSTNIP00000000168	RRM_1	PF00076.22	5.6e-32	1	2
ENSTNIP00000000168	RRM_1	PF00076.22	5.6e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000003377	-	1413	-	ENSTNIP00000000168	470 (aa)	-	H3BW06

Gene Model

Click here to download ENSTNIG00000000058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000000058's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000000058	-	75	53.989	ENSTNIG00000006844	rbm14b	99	45.174

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000000058	-	99	78.166	ENSAPOG00000003380	-	90	78.166	Acanthochromis_polyacanthus
ENSTNIG00000000058	-	71	61.011	ENSAPOG00000021712	rbm14b	75	59.783	Acanthochromis_polyacanthus
ENSTNIG00000000058	-	99	67.438	ENSACIG00000021173	-	99	68.248	Amphilophus_citrinellus
ENSTNIG00000000058	-	100	78.261	ENSAOCG00000001659	-	92	78.043	Amphiprion_ocellaris
ENSTNIG00000000058	-	96	61.011	ENSAOCG00000008941	rbm14b	99	48.361	Amphiprion_ocellaris
ENSTNIG00000000058	-	99	47.423	ENSAPEG00000003161	rbm14b	99	47.844	Amphiprion_percula
ENSTNIG00000000058	-	99	78.775	ENSAPEG00000016988	-	92	78.355	Amphiprion_percula
ENSTNIG00000000058	-	96	76.333	ENSATEG00000009700	-	87	76.119	Anabas_testudineus
ENSTNIG00000000058	-	75	58.177	ENSATEG00000003034	rbm14b	99	41.766	Anabas_testudineus
ENSTNIG00000000058	-	100	67.151	ENSACLG00000009112	-	97	67.514	Astatotilapia_calliptera
ENSTNIG00000000058	-	71	61.011	ENSACLG00000014355	rbm14b	81	59.783	Astatotilapia_calliptera
ENSTNIG00000000058	-	79	60.101	ENSAMXG00000007233	rbm14a	85	57.656	Astyanax_mexicanus
ENSTNIG00000000058	-	75	47.778	ENSAMXG00000031225	rbm14b	86	45.214	Astyanax_mexicanus
ENSTNIG00000000058	-	100	73.856	ENSCSEG00000019690	-	100	65.814	Cynoglossus_semilaevis
ENSTNIG00000000058	-	75	52.392	ENSCSEG00000000357	rbm14b	99	44.746	Cynoglossus_semilaevis
ENSTNIG00000000058	-	100	76.149	ENSCVAG00000014858	-	100	67.455	Cyprinodon_variegatus
ENSTNIG00000000058	-	75	59.124	ENSDARG00000103834	rbm14b	99	41.522	Danio_rerio
ENSTNIG00000000058	-	79	59.126	ENSDARG00000012723	rbm14a	99	52.664	Danio_rerio
ENSTNIG00000000058	-	99	51.992	ENSELUG00000023633	rbm14a	99	52.542	Esox_lucius
ENSTNIG00000000058	-	71	61.624	ENSELUG00000004690	rbm14b	75	60.148	Esox_lucius
ENSTNIG00000000058	-	55	61.151	ENSFHEG00000021265	rbm14b	99	42.760	Fundulus_heteroclitus
ENSTNIG00000000058	-	80	81.654	ENSFHEG00000020913	-	86	75.055	Fundulus_heteroclitus
ENSTNIG00000000058	-	79	77.660	ENSGMOG00000010840	-	78	77.394	Gadus_morhua
ENSTNIG00000000058	-	92	83.422	ENSGAFG00000004455	-	99	68.519	Gambusia_affinis
ENSTNIG00000000058	-	72	60.573	ENSGAFG00000001924	rbm14b	99	41.105	Gambusia_affinis
ENSTNIG00000000058	-	100	77.708	ENSGACG00000020440	-	100	77.708	Gasterosteus_aculeatus
ENSTNIG00000000058	-	95	75.699	ENSHBUG00000003665	-	97	67.514	Haplochromis_burtoni
ENSTNIG00000000058	-	71	61.011	ENSHBUG00000016754	rbm14b	81	59.783	Haplochromis_burtoni
ENSTNIG00000000058	-	80	81.633	ENSHCOG00000004071	-	91	74.364	Hippocampus_comes
ENSTNIG00000000058	-	75	55.200	ENSHCOG00000012571	rbm14b	99	66.038	Hippocampus_comes
ENSTNIG00000000058	-	75	47.216	ENSIPUG00000009089	rbm14b	99	41.368	Ictalurus_punctatus
ENSTNIG00000000058	-	79	54.612	ENSIPUG00000021256	rbm14a	85	52.535	Ictalurus_punctatus
ENSTNIG00000000058	-	79	82.368	ENSKMAG00000008514	-	88	75.435	Kryptolebias_marmoratus
ENSTNIG00000000058	-	71	60.650	ENSKMAG00000020444	rbm14b	86	59.420	Kryptolebias_marmoratus
ENSTNIG00000000058	-	100	70.185	ENSLBEG00000001217	-	93	77.851	Labrus_bergylta
ENSTNIG00000000058	-	72	60.791	ENSLBEG00000027934	rbm14b	62	59.567	Labrus_bergylta
ENSTNIG00000000058	-	75	46.018	ENSMAMG00000014394	rbm14b	94	41.438	Mastacembelus_armatus
ENSTNIG00000000058	-	94	75.758	ENSMAMG00000021313	-	91	74.946	Mastacembelus_armatus
ENSTNIG00000000058	-	71	61.011	ENSMZEG00005020834	rbm14b	82	59.783	Maylandia_zebra
ENSTNIG00000000058	-	95	75.699	ENSMZEG00005001201	-	100	67.151	Maylandia_zebra
ENSTNIG00000000058	-	99	71.186	ENSMMOG00000014501	-	99	68.927	Mola_mola
ENSTNIG00000000058	-	72	55.755	ENSMMOG00000012912	rbm14b	71	54.513	Mola_mola
ENSTNIG00000000058	-	75	53.743	ENSMALG00000015445	rbm14b	99	46.640	Monopterus_albus
ENSTNIG00000000058	-	71	61.011	ENSNBRG00000003378	rbm14b	82	59.783	Neolamprologus_brichardi
ENSTNIG00000000058	-	99	67.459	ENSNBRG00000004960	-	99	67.518	Neolamprologus_brichardi
ENSTNIG00000000058	-	75	58.289	ENSONIG00000013035	rbm14b	99	49.798	Oreochromis_niloticus
ENSTNIG00000000058	-	100	74.798	ENSONIG00000008557	-	100	74.194	Oreochromis_niloticus
ENSTNIG00000000058	-	100	73.650	ENSORLG00000001900	-	91	75.711	Oryzias_latipes
ENSTNIG00000000058	-	99	43.080	ENSORLG00000008051	rbm14b	99	42.440	Oryzias_latipes
ENSTNIG00000000058	-	100	73.650	ENSORLG00020019144	-	91	75.711	Oryzias_latipes_hni
ENSTNIG00000000058	-	99	42.981	ENSORLG00020005551	rbm14b	97	42.513	Oryzias_latipes_hni
ENSTNIG00000000058	-	99	43.080	ENSORLG00015022683	rbm14b	99	42.637	Oryzias_latipes_hsok
ENSTNIG00000000058	-	100	73.650	ENSORLG00015000082	-	91	75.983	Oryzias_latipes_hsok
ENSTNIG00000000058	-	81	87.156	ENSOMEG00000006508	-	100	90.385	Oryzias_melastigma
ENSTNIG00000000058	-	99	60.650	ENSOMEG00000000910	rbm14b	99	47.400	Oryzias_melastigma
ENSTNIG00000000058	-	79	48.148	ENSPKIG00000009078	rbm14b	99	45.045	Paramormyrops_kingsleyae
ENSTNIG00000000058	-	79	77.807	ENSPMGG00000018869	-	93	85.811	Periophthalmus_magnuspinnatus
ENSTNIG00000000058	-	72	61.011	ENSPMGG00000013064	rbm14b	83	59.783	Periophthalmus_magnuspinnatus
ENSTNIG00000000058	-	80	83.594	ENSPFOG00000004843	-	88	76.957	Poecilia_formosa
ENSTNIG00000000058	-	75	47.797	ENSPFOG00000003614	rbm14b	99	42.142	Poecilia_formosa
ENSTNIG00000000058	-	80	83.594	ENSPLAG00000017359	-	88	76.957	Poecilia_latipinna
ENSTNIG00000000058	-	75	46.696	ENSPLAG00000001395	rbm14b	99	41.824	Poecilia_latipinna
ENSTNIG00000000058	-	72	60.932	ENSPMEG00000012911	rbm14b	99	40.760	Poecilia_mexicana
ENSTNIG00000000058	-	93	83.594	ENSPMEG00000004894	-	88	76.957	Poecilia_mexicana
ENSTNIG00000000058	-	80	83.073	ENSPREG00000007274	-	88	76.522	Poecilia_reticulata
ENSTNIG00000000058	-	74	59.044	ENSPREG00000003013	rbm14b	92	41.652	Poecilia_reticulata
ENSTNIG00000000058	-	100	67.151	ENSPNYG00000015906	-	100	67.151	Pundamilia_nyererei
ENSTNIG00000000058	-	71	61.011	ENSPNYG00000023605	rbm14b	82	59.783	Pundamilia_nyererei
ENSTNIG00000000058	-	99	51.969	ENSPNAG00000012473	rbm14a	97	51.167	Pygocentrus_nattereri
ENSTNIG00000000058	-	75	47.111	ENSPNAG00000001977	rbm14b	84	44.399	Pygocentrus_nattereri
ENSTNIG00000000058	-	99	44.928	ENSSFOG00015023796	rbm14b	99	40.700	Scleropages_formosus
ENSTNIG00000000058	-	75	62.319	ENSSMAG00000004522	rbm14b	93	60.870	Scophthalmus_maximus
ENSTNIG00000000058	-	100	76.559	ENSSMAG00000002055	-	100	66.728	Scophthalmus_maximus
ENSTNIG00000000058	-	71	61.011	ENSSDUG00000007975	rbm14b	67	59.783	Seriola_dumerili
ENSTNIG00000000058	-	94	77.440	ENSSDUG00000020756	-	88	75.803	Seriola_dumerili
ENSTNIG00000000058	-	71	61.011	ENSSLDG00000006472	rbm14b	67	59.783	Seriola_lalandi_dorsalis
ENSTNIG00000000058	-	94	76.774	ENSSLDG00000006311	-	84	75.319	Seriola_lalandi_dorsalis
ENSTNIG00000000058	-	71	61.011	ENSSPAG00000004231	rbm14b	85	59.783	Stegastes_partitus
ENSTNIG00000000058	-	99	78.993	ENSSPAG00000010825	-	90	78.337	Stegastes_partitus
ENSTNIG00000000058	-	94	88.470	ENSTRUG00000009504	-	83	88.274	Takifugu_rubripes
ENSTNIG00000000058	-	73	60.791	ENSTRUG00000005716	rbm14b	84	59.567	Takifugu_rubripes
ENSTNIG00000000058	-	92	81.424	ENSXCOG00000006825	-	80	74.185	Xiphophorus_couchianus
ENSTNIG00000000058	-	93	83.333	ENSXMAG00000000338	-	85	76.304	Xiphophorus_maculatus
ENSTNIG00000000058	-	71	60.650	ENSXMAG00000008390	rbm14b	99	41.796	Xiphophorus_maculatus