EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000000223 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 4435 bases
Position: chrUn_random:96206814-96211248
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000003654	DND1_DSRM	PF14709.7	1.3e-20	1	1
ENSTNIP00000003562	DND1_DSRM	PF14709.7	1.8e-20	1	1
ENSTNIP00000003654	RRM_1	PF00076.22	2.9e-12	1	1
ENSTNIP00000003562	RRM_1	PF00076.22	2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000000153	-	1047	-	ENSTNIP00000003654	349 (aa)	-	H3C5Y4
ENSTNIT00000002199	-	1038	-	ENSTNIP00000003562	346 (aa)	-	H3C5P2

Gene Model

Click here to download ENSTNIG00000000223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000000223's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000000223	-	100	79.143	ENSTNIG00000004367	-	99	79.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000000223	-	96	36.471	ENSG00000256453	DND1	91	35.465	Homo_sapiens
ENSTNIG00000000223	-	96	35.484	ENSAMEG00000010881	DND1	91	35.191	Ailuropoda_melanoleuca
ENSTNIG00000000223	-	99	49.867	ENSACIG00000017877	dnd1	98	49.337	Amphilophus_citrinellus
ENSTNIG00000000223	-	97	49.722	ENSAOCG00000009051	dnd1	98	50.416	Amphiprion_ocellaris
ENSTNIG00000000223	-	98	50.279	ENSAPEG00000003554	dnd1	92	50.838	Amphiprion_percula
ENSTNIG00000000223	-	62	55.760	ENSATEG00000015421	dnd1	88	55.760	Anabas_testudineus
ENSTNIG00000000223	-	99	47.606	ENSATEG00000015824	dnd1	96	47.606	Anabas_testudineus
ENSTNIG00000000223	-	56	41.538	ENSAPLG00000013518	DND1	94	41.538	Anas_platyrhynchos
ENSTNIG00000000223	-	99	34.146	ENSACAG00000012925	DND1	95	33.424	Anolis_carolinensis
ENSTNIG00000000223	-	96	36.152	ENSANAG00000037212	-	91	35.652	Aotus_nancymaae
ENSTNIG00000000223	-	96	34.402	ENSANAG00000034596	-	90	34.111	Aotus_nancymaae
ENSTNIG00000000223	-	99	49.337	ENSACLG00000006388	dnd1	98	50.265	Astatotilapia_calliptera
ENSTNIG00000000223	-	89	50.725	ENSAMXG00000018752	dnd1	98	38.462	Astyanax_mexicanus
ENSTNIG00000000223	-	97	35.088	ENSBTAG00000018845	DND1	90	35.484	Bos_taurus
ENSTNIG00000000223	-	96	36.152	ENSCJAG00000016345	DND1	91	35.652	Callithrix_jacchus
ENSTNIG00000000223	-	96	36.070	ENSCAFG00000005888	DND1	91	35.072	Canis_familiaris
ENSTNIG00000000223	-	99	34.943	ENSCAFG00020001055	DND1	93	34.659	Canis_lupus_dingo
ENSTNIG00000000223	-	94	35.588	ENSCHIG00000026376	DND1	89	36.310	Capra_hircus
ENSTNIG00000000223	-	99	35.854	ENSTSYG00000026365	DND1	94	35.854	Carlito_syrichta
ENSTNIG00000000223	-	99	34.582	ENSCPOG00000009192	DND1	92	34.582	Cavia_porcellus
ENSTNIG00000000223	-	96	34.870	ENSCCAG00000020065	DND1	91	34.384	Cebus_capucinus
ENSTNIG00000000223	-	97	35.072	ENSCATG00000025088	DND1	91	35.072	Cercocebus_atys
ENSTNIG00000000223	-	99	34.770	ENSCLAG00000012746	DND1	92	34.770	Chinchilla_lanigera
ENSTNIG00000000223	-	96	36.070	ENSCSAG00000012677	DND1	90	35.484	Chlorocebus_sabaeus
ENSTNIG00000000223	-	94	36.778	ENSCPBG00000007689	DND1	90	36.778	Chrysemys_picta_bellii
ENSTNIG00000000223	-	99	34.195	ENSCGRG00001017900	Dnd1	92	34.195	Cricetulus_griseus_chok1gshd
ENSTNIG00000000223	-	99	34.195	ENSCGRG00000011003	Dnd1	92	34.195	Cricetulus_griseus_crigri
ENSTNIG00000000223	-	99	44.652	ENSCSEG00000001828	-	98	45.205	Cynoglossus_semilaevis
ENSTNIG00000000223	-	99	42.697	ENSCVAG00000001991	-	98	42.697	Cyprinodon_variegatus
ENSTNIG00000000223	-	98	38.384	ENSDARG00000022813	dnd1	96	37.879	Danio_rerio
ENSTNIG00000000223	-	96	35.777	ENSDNOG00000013017	DND1	91	34.493	Dasypus_novemcinctus
ENSTNIG00000000223	-	99	35.735	ENSDORG00000014552	Dnd1	92	35.735	Dipodomys_ordii
ENSTNIG00000000223	-	96	35.882	ENSETEG00000005397	DND1	91	35.294	Echinops_telfairi
ENSTNIG00000000223	-	97	34.012	ENSEASG00005017533	DND1	91	34.302	Equus_asinus_asinus
ENSTNIG00000000223	-	97	34.012	ENSECAG00000011014	DND1	96	35.000	Equus_caballus
ENSTNIG00000000223	-	97	33.626	ENSEEUG00000004338	DND1	90	34.615	Erinaceus_europaeus
ENSTNIG00000000223	-	99	41.240	ENSELUG00000002636	dnd1	99	42.318	Esox_lucius
ENSTNIG00000000223	-	96	35.484	ENSFCAG00000042441	DND1	91	34.493	Felis_catus
ENSTNIG00000000223	-	56	41.000	ENSFALG00000009513	DND1	56	41.000	Ficedula_albicollis
ENSTNIG00000000223	-	87	43.114	ENSFHEG00000000128	-	81	56.186	Fundulus_heteroclitus
ENSTNIG00000000223	-	64	46.888	ENSGMOG00000016112	-	73	44.398	Gadus_morhua
ENSTNIG00000000223	-	83	36.271	ENSGALG00000051899	DND1	81	36.271	Gallus_gallus
ENSTNIG00000000223	-	100	47.709	ENSGAFG00000019603	dnd1	99	48.851	Gambusia_affinis
ENSTNIG00000000223	-	98	49.441	ENSGACG00000019630	dnd1	96	49.721	Gasterosteus_aculeatus
ENSTNIG00000000223	-	94	35.629	ENSGAGG00000000023	DND1	90	35.629	Gopherus_agassizii
ENSTNIG00000000223	-	96	36.471	ENSGGOG00000042535	-	91	35.465	Gorilla_gorilla
ENSTNIG00000000223	-	96	36.471	ENSGGOG00000044128	-	91	35.465	Gorilla_gorilla
ENSTNIG00000000223	-	96	32.036	ENSGGOG00000024497	-	90	31.437	Gorilla_gorilla
ENSTNIG00000000223	-	99	49.602	ENSHBUG00000013920	dnd1	98	50.529	Haplochromis_burtoni
ENSTNIG00000000223	-	99	34.006	ENSHGLG00000009358	DND1	92	34.006	Heterocephalus_glaber_female
ENSTNIG00000000223	-	99	42.742	ENSHCOG00000019493	dnd1	96	42.742	Hippocampus_comes
ENSTNIG00000000223	-	98	39.523	ENSIPUG00000010743	dnd1	90	39.305	Ictalurus_punctatus
ENSTNIG00000000223	-	99	34.097	ENSSTOG00000002000	DND1	92	34.384	Ictidomys_tridecemlineatus
ENSTNIG00000000223	-	99	35.714	ENSJJAG00000023986	Dnd1	91	36.765	Jaculus_jaculus
ENSTNIG00000000223	-	98	50.420	ENSKMAG00000001707	-	97	50.704	Kryptolebias_marmoratus
ENSTNIG00000000223	-	99	48.312	ENSLBEG00000024151	dnd1	93	48.312	Labrus_bergylta
ENSTNIG00000000223	-	95	32.537	ENSLACG00000005507	DND1	62	41.546	Latimeria_chalumnae
ENSTNIG00000000223	-	58	40.777	ENSLOCG00000011212	dnd1	70	40.777	Lepisosteus_oculatus
ENSTNIG00000000223	-	96	35.882	ENSLAFG00000008161	DND1	91	35.294	Loxodonta_africana
ENSTNIG00000000223	-	97	35.072	ENSMFAG00000003284	DND1	91	35.072	Macaca_fascicularis
ENSTNIG00000000223	-	97	35.072	ENSMMUG00000004480	DND1	91	35.072	Macaca_mulatta
ENSTNIG00000000223	-	97	35.072	ENSMNEG00000038956	DND1	91	35.072	Macaca_nemestrina
ENSTNIG00000000223	-	97	35.072	ENSMLEG00000044049	DND1	91	35.072	Mandrillus_leucophaeus
ENSTNIG00000000223	-	100	50.396	ENSMAMG00000001857	dnd1	99	50.396	Mastacembelus_armatus
ENSTNIG00000000223	-	99	50.265	ENSMZEG00005017442	dnd1	98	50.265	Maylandia_zebra
ENSTNIG00000000223	-	95	34.925	ENSMGAG00000000896	DND1	88	34.925	Meleagris_gallopavo
ENSTNIG00000000223	-	99	34.483	ENSMAUG00000019312	Dnd1	92	34.483	Mesocricetus_auratus
ENSTNIG00000000223	-	96	35.484	ENSMICG00000029187	DND1	91	34.783	Microcebus_murinus
ENSTNIG00000000223	-	99	33.523	ENSMOCG00000018076	Dnd1	92	33.523	Microtus_ochrogaster
ENSTNIG00000000223	-	99	45.576	ENSMMOG00000017519	dnd1	96	46.322	Mola_mola
ENSTNIG00000000223	-	99	50.943	ENSMALG00000000099	dnd1	98	50.943	Monopterus_albus
ENSTNIG00000000223	-	99	34.195	MGP_CAROLIEiJ_G0022137	Dnd1	92	34.571	Mus_caroli
ENSTNIG00000000223	-	99	34.195	ENSMUSG00000044595	Dnd1	92	34.571	Mus_musculus
ENSTNIG00000000223	-	99	33.811	MGP_PahariEiJ_G0018871	Dnd1	92	34.286	Mus_pahari
ENSTNIG00000000223	-	99	33.908	MGP_SPRETEiJ_G0023049	Dnd1	92	34.286	Mus_spretus
ENSTNIG00000000223	-	99	35.593	ENSMLUG00000003195	DND1	94	35.593	Myotis_lucifugus
ENSTNIG00000000223	-	73	30.451	ENSNGAG00000018511	Dnd1	92	31.343	Nannospalax_galili
ENSTNIG00000000223	-	98	48.936	ENSNBRG00000007036	dnd1	93	49.602	Neolamprologus_brichardi
ENSTNIG00000000223	-	96	36.471	ENSNLEG00000034318	DND1	91	35.465	Nomascus_leucogenys
ENSTNIG00000000223	-	91	36.478	ENSMEUG00000016276	DND1	89	36.478	Notamacropus_eugenii
ENSTNIG00000000223	-	99	34.770	ENSODEG00000009578	-	92	34.770	Octodon_degus
ENSTNIG00000000223	-	99	34.682	ENSODEG00000003591	-	92	34.682	Octodon_degus
ENSTNIG00000000223	-	81	49.842	ENSONIG00000011554	dnd1	98	50.943	Oreochromis_niloticus
ENSTNIG00000000223	-	73	30.798	ENSOCUG00000004240	DND1	92	30.798	Oryctolagus_cuniculus
ENSTNIG00000000223	-	99	48.370	ENSORLG00000025449	dnd1	98	48.370	Oryzias_latipes
ENSTNIG00000000223	-	99	47.554	ENSORLG00020008313	dnd1	98	47.554	Oryzias_latipes_hni
ENSTNIG00000000223	-	99	47.826	ENSORLG00015017254	dnd1	98	47.826	Oryzias_latipes_hsok
ENSTNIG00000000223	-	99	49.046	ENSOMEG00000011374	dnd1	98	49.046	Oryzias_melastigma
ENSTNIG00000000223	-	96	35.777	ENSOGAG00000033318	DND1	91	35.072	Otolemur_garnettii
ENSTNIG00000000223	-	96	36.765	ENSPPAG00000031543	DND1	91	35.465	Pan_paniscus
ENSTNIG00000000223	-	96	35.484	ENSPPRG00000009501	-	91	34.493	Panthera_pardus
ENSTNIG00000000223	-	96	35.191	ENSPPRG00000016836	-	91	34.203	Panthera_pardus
ENSTNIG00000000223	-	94	32.335	ENSPTRG00000046773	-	92	31.532	Pan_troglodytes
ENSTNIG00000000223	-	94	32.036	ENSPTRG00000048632	-	92	31.832	Pan_troglodytes
ENSTNIG00000000223	-	94	31.940	ENSPTRG00000048511	-	92	31.437	Pan_troglodytes
ENSTNIG00000000223	-	96	36.765	ENSPTRG00000017324	DND1	91	35.465	Pan_troglodytes
ENSTNIG00000000223	-	97	35.072	ENSPANG00000007892	DND1	91	35.072	Papio_anubis
ENSTNIG00000000223	-	99	39.167	ENSPKIG00000020709	dnd1	99	39.167	Paramormyrops_kingsleyae
ENSTNIG00000000223	-	87	42.690	ENSPMGG00000016223	dnd1	100	42.690	Periophthalmus_magnuspinnatus
ENSTNIG00000000223	-	96	36.578	ENSPCIG00000017692	DND1	92	35.988	Phascolarctos_cinereus
ENSTNIG00000000223	-	100	46.702	ENSPFOG00000005620	-	99	46.702	Poecilia_formosa
ENSTNIG00000000223	-	100	46.702	ENSPLAG00000002152	-	94	46.419	Poecilia_latipinna
ENSTNIG00000000223	-	100	46.966	ENSPMEG00000020156	dnd1	80	46.966	Poecilia_mexicana
ENSTNIG00000000223	-	100	44.591	ENSPREG00000006548	dnd1	96	67.606	Poecilia_reticulata
ENSTNIG00000000223	-	96	36.471	ENSPPYG00000015863	DND1	91	35.465	Pongo_abelii
ENSTNIG00000000223	-	97	33.429	ENSPCAG00000001453	DND1	94	32.853	Procavia_capensis
ENSTNIG00000000223	-	96	36.657	ENSPCOG00000022204	DND1	91	35.362	Propithecus_coquereli
ENSTNIG00000000223	-	96	34.412	ENSPVAG00000009710	DND1	91	32.558	Pteropus_vampyrus
ENSTNIG00000000223	-	97	50.000	ENSPNYG00000018115	dnd1	95	50.943	Pundamilia_nyererei
ENSTNIG00000000223	-	97	39.426	ENSPNAG00000013275	dnd1	97	39.687	Pygocentrus_nattereri
ENSTNIG00000000223	-	99	33.811	ENSRNOG00000016894	Dnd1	92	33.908	Rattus_norvegicus
ENSTNIG00000000223	-	97	35.072	ENSRBIG00000036511	DND1	91	35.072	Rhinopithecus_bieti
ENSTNIG00000000223	-	97	35.072	ENSRROG00000039329	DND1	91	35.072	Rhinopithecus_roxellana
ENSTNIG00000000223	-	96	36.443	ENSSBOG00000027247	DND1	91	35.942	Saimiri_boliviensis_boliviensis
ENSTNIG00000000223	-	99	36.103	ENSSHAG00000016477	DND1	91	37.168	Sarcophilus_harrisii
ENSTNIG00000000223	-	97	40.379	ENSSFOG00015011717	dnd1	90	40.379	Scleropages_formosus
ENSTNIG00000000223	-	81	48.418	ENSSMAG00000003517	-	86	48.418	Scophthalmus_maximus
ENSTNIG00000000223	-	98	47.861	ENSSMAG00000014775	dnd1	98	47.861	Scophthalmus_maximus
ENSTNIG00000000223	-	100	51.979	ENSSDUG00000001174	dnd1	98	51.979	Seriola_dumerili
ENSTNIG00000000223	-	99	51.872	ENSSLDG00000007909	dnd1	98	51.604	Seriola_lalandi_dorsalis
ENSTNIG00000000223	-	94	35.736	ENSSPUG00000000311	DND1	90	35.736	Sphenodon_punctatus
ENSTNIG00000000223	-	87	44.286	ENSSPAG00000023520	dnd1	87	44.857	Stegastes_partitus
ENSTNIG00000000223	-	96	35.484	ENSSSCG00000014374	DND1	91	34.493	Sus_scrofa
ENSTNIG00000000223	-	99	62.291	ENSTRUG00000009108	-	98	62.291	Takifugu_rubripes
ENSTNIG00000000223	-	96	35.191	ENSTBEG00000006754	DND1	91	34.493	Tupaia_belangeri
ENSTNIG00000000223	-	51	40.884	ENSTTRG00000001755	-	82	41.436	Tursiops_truncatus
ENSTNIG00000000223	-	86	32.237	ENSTTRG00000010411	-	93	32.237	Tursiops_truncatus
ENSTNIG00000000223	-	96	35.191	ENSUAMG00000004664	DND1	91	35.191	Ursus_americanus
ENSTNIG00000000223	-	99	34.286	ENSVVUG00000013559	DND1	93	34.870	Vulpes_vulpes
ENSTNIG00000000223	-	55	42.051	ENSXETG00000016114	dnd1	51	42.051	Xenopus_tropicalis
ENSTNIG00000000223	-	97	47.581	ENSXCOG00000000764	dnd1	96	46.917	Xiphophorus_couchianus
ENSTNIG00000000223	-	100	46.615	ENSXMAG00000017784	dnd1	99	46.615	Xiphophorus_maculatus