EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000000277 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 4826 bases
Position: chr15:576136-580961
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000002852	zf-C2H2	PF00096.26	4.3e-29	1	6
ENSTNIP00000002852	zf-C2H2	PF00096.26	4.3e-29	2	6
ENSTNIP00000002852	zf-C2H2	PF00096.26	4.3e-29	3	6
ENSTNIP00000002852	zf-C2H2	PF00096.26	4.3e-29	4	6
ENSTNIP00000002852	zf-C2H2	PF00096.26	4.3e-29	5	6
ENSTNIP00000002852	zf-C2H2	PF00096.26	4.3e-29	6	6
ENSTNIP00000002852	zf-met	PF12874.7	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000004055	-	588	-	ENSTNIP00000002852	196 (aa)	-	H3C3N3

Gene Model

Click here to download ENSTNIG00000000277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000000277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000000277	-	93	44.505	ENSTNIG00000001164	ZNF628	98	44.505
ENSTNIG00000000277	-	91	40.385	ENSTNIG00000003865	-	54	40.385
ENSTNIG00000000277	-	93	42.697	ENSTNIG00000009831	-	95	42.697
ENSTNIG00000000277	-	98	41.104	ENSTNIG00000008200	-	100	41.808
ENSTNIG00000000277	-	93	43.750	ENSTNIG00000018384	scrt1b	50	43.750
ENSTNIG00000000277	-	93	35.359	ENSTNIG00000001159	si:dkey-89b17.4	98	35.359
ENSTNIG00000000277	-	97	42.938	ENSTNIG00000011188	-	98	42.938
ENSTNIG00000000277	-	93	38.251	ENSTNIG00000008100	-	99	38.000
ENSTNIG00000000277	-	99	39.394	ENSTNIG00000005479	-	99	39.394
ENSTNIG00000000277	-	99	37.500	ENSTNIG00000000073	znf646	97	37.500
ENSTNIG00000000277	-	94	39.286	ENSTNIG00000011367	znf710b	52	39.286
ENSTNIG00000000277	-	95	50.549	ENSTNIG00000018984	-	99	50.549
ENSTNIG00000000277	-	96	48.810	ENSTNIG00000008154	-	99	48.810
ENSTNIG00000000277	-	97	39.286	ENSTNIG00000005051	znf341	56	30.102
ENSTNIG00000000277	-	93	46.703	ENSTNIG00000002343	-	86	46.703
ENSTNIG00000000277	-	93	49.068	ENSTNIG00000002344	-	100	49.068
ENSTNIG00000000277	-	92	40.000	ENSTNIG00000008504	snai2	62	40.000
ENSTNIG00000000277	-	93	49.451	ENSTNIG00000000330	-	100	49.451
ENSTNIG00000000277	-	93	47.059	ENSTNIG00000000934	-	97	47.059
ENSTNIG00000000277	-	96	40.909	ENSTNIG00000012449	zbtb48	50	40.909
ENSTNIG00000000277	-	97	44.578	ENSTNIG00000014443	prdm9	65	44.578
ENSTNIG00000000277	-	93	38.333	ENSTNIG00000005798	zbtb16a	53	38.333
ENSTNIG00000000277	-	93	44.444	ENSTNIG00000010722	GZF1	50	44.444
ENSTNIG00000000277	-	93	47.826	ENSTNIG00000003479	-	100	47.826
ENSTNIG00000000277	-	94	46.369	ENSTNIG00000008242	-	99	46.369
ENSTNIG00000000277	-	93	46.739	ENSTNIG00000005856	-	99	46.739
ENSTNIG00000000277	-	93	54.545	ENSTNIG00000017000	-	100	54.545
ENSTNIG00000000277	-	97	49.275	ENSTNIG00000019069	-	100	49.275
ENSTNIG00000000277	-	96	35.294	ENSTNIG00000005901	prdm5	72	35.294
ENSTNIG00000000277	-	92	44.776	ENSTNIG00000003834	gfi1b	50	44.776
ENSTNIG00000000277	-	94	43.976	ENSTNIG00000000528	-	98	43.976
ENSTNIG00000000277	-	93	61.039	ENSTNIG00000000320	-	100	55.319
ENSTNIG00000000277	-	93	50.000	ENSTNIG00000003979	-	99	50.909
ENSTNIG00000000277	-	93	40.000	ENSTNIG00000012473	scrt2	52	40.000
ENSTNIG00000000277	-	97	39.583	ENSTNIG00000003880	znf319b	85	39.583
ENSTNIG00000000277	-	98	42.727	ENSTNIG00000010902	zbtb17	55	42.727
ENSTNIG00000000277	-	93	34.395	ENSTNIG00000001921	-	65	34.395
ENSTNIG00000000277	-	93	41.209	ENSTNIG00000005023	-	100	40.110

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000000277	-	92	38.710	ENSACIG00000008886	znf1164	80	38.710	Amphilophus_citrinellus
ENSTNIG00000000277	-	93	44.172	ENSACIG00000007882	-	73	44.172	Amphilophus_citrinellus
ENSTNIG00000000277	-	97	46.486	ENSACIG00000000360	si:ch211-241b2.1	91	46.486	Amphilophus_citrinellus
ENSTNIG00000000277	-	91	43.478	ENSATEG00000008667	-	79	43.478	Anabas_testudineus
ENSTNIG00000000277	-	93	47.024	ENSATEG00000008683	si:ch211-241b2.1	72	47.024	Anabas_testudineus
ENSTNIG00000000277	-	94	34.752	ENSACLG00000017449	-	61	34.752	Astatotilapia_calliptera
ENSTNIG00000000277	-	93	44.633	ENSACLG00000024670	-	71	44.633	Astatotilapia_calliptera
ENSTNIG00000000277	-	93	42.353	ENSACLG00000000521	-	97	42.353	Astatotilapia_calliptera
ENSTNIG00000000277	-	94	44.565	ENSAMXG00000043291	-	62	44.565	Astyanax_mexicanus
ENSTNIG00000000277	-	93	46.369	ENSAMXG00000029660	-	54	46.369	Astyanax_mexicanus
ENSTNIG00000000277	-	93	47.059	ENSAMXG00000041650	-	85	47.059	Astyanax_mexicanus
ENSTNIG00000000277	-	93	50.000	ENSCSEG00000015585	-	71	50.000	Cynoglossus_semilaevis
ENSTNIG00000000277	-	94	49.153	ENSDARG00000102401	znf1001	95	49.153	Danio_rerio
ENSTNIG00000000277	-	93	47.514	ENSDARG00000113011	zgc:113102	88	45.604	Danio_rerio
ENSTNIG00000000277	-	93	47.802	ENSDARG00000053165	zgc:113377	80	47.802	Danio_rerio
ENSTNIG00000000277	-	93	46.703	ENSDARG00000099890	CU207221.2	95	46.703	Danio_rerio
ENSTNIG00000000277	-	93	43.791	ENSDARG00000109703	FO834825.1	89	47.253	Danio_rerio
ENSTNIG00000000277	-	94	49.153	ENSDARG00000115857	znf1001	95	49.153	Danio_rerio
ENSTNIG00000000277	-	93	45.604	ENSDARG00000092605	znf1003	70	45.604	Danio_rerio
ENSTNIG00000000277	-	94	43.646	ENSFHEG00000018209	-	67	43.646	Fundulus_heteroclitus
ENSTNIG00000000277	-	93	50.549	ENSFHEG00000018009	-	52	50.549	Fundulus_heteroclitus
ENSTNIG00000000277	-	93	46.667	ENSFHEG00000013152	-	61	46.667	Fundulus_heteroclitus
ENSTNIG00000000277	-	95	48.544	ENSHBUG00000009953	-	57	48.544	Haplochromis_burtoni
ENSTNIG00000000277	-	93	48.352	ENSHBUG00000018916	-	62	48.352	Haplochromis_burtoni
ENSTNIG00000000277	-	93	45.977	ENSKMAG00000009563	-	73	44.037	Kryptolebias_marmoratus
ENSTNIG00000000277	-	94	51.190	ENSLBEG00000022939	-	52	51.190	Labrus_bergylta
ENSTNIG00000000277	-	93	47.802	ENSMZEG00005027793	-	73	47.802	Maylandia_zebra
ENSTNIG00000000277	-	93	48.901	ENSMZEG00005007426	-	66	48.901	Maylandia_zebra
ENSTNIG00000000277	-	96	44.693	ENSMZEG00005021426	-	78	44.693	Maylandia_zebra
ENSTNIG00000000277	-	100	42.857	ENSMZEG00005022161	-	89	41.071	Maylandia_zebra
ENSTNIG00000000277	-	99	42.857	ENSMZEG00005025729	-	93	42.857	Maylandia_zebra
ENSTNIG00000000277	-	92	35.897	ENSMZEG00005005162	-	78	35.897	Maylandia_zebra
ENSTNIG00000000277	-	93	47.586	ENSMZEG00005026470	-	54	47.586	Maylandia_zebra
ENSTNIG00000000277	-	98	47.753	ENSMZEG00005027943	-	94	47.753	Maylandia_zebra
ENSTNIG00000000277	-	93	36.170	ENSMZEG00005025568	-	79	36.170	Maylandia_zebra
ENSTNIG00000000277	-	99	38.220	ENSMALG00000008638	-	69	38.750	Monopterus_albus
ENSTNIG00000000277	-	93	50.273	ENSMALG00000018074	-	58	50.273	Monopterus_albus
ENSTNIG00000000277	-	93	55.357	ENSNBRG00000000577	-	75	55.357	Neolamprologus_brichardi
ENSTNIG00000000277	-	99	39.873	ENSONIG00000003363	-	99	39.873	Oreochromis_niloticus
ENSTNIG00000000277	-	94	43.671	ENSONIG00000013908	-	100	43.671	Oreochromis_niloticus
ENSTNIG00000000277	-	97	40.268	ENSONIG00000006585	-	99	40.268	Oreochromis_niloticus
ENSTNIG00000000277	-	93	80.612	ENSORLG00020019341	-	89	81.818	Oryzias_latipes_hni
ENSTNIG00000000277	-	93	55.294	ENSPKIG00000020324	-	50	55.294	Paramormyrops_kingsleyae
ENSTNIG00000000277	-	93	41.772	ENSPMGG00000001558	znf1174	56	41.772	Periophthalmus_magnuspinnatus
ENSTNIG00000000277	-	93	46.995	ENSPFOG00000011766	-	98	46.995	Poecilia_formosa
ENSTNIG00000000277	-	93	62.222	ENSPFOG00000001144	-	100	63.102	Poecilia_formosa
ENSTNIG00000000277	-	99	45.604	ENSPLAG00000016561	zgc:113348	90	47.305	Poecilia_latipinna
ENSTNIG00000000277	-	97	46.154	ENSPMEG00000007573	zgc:113343	61	46.154	Poecilia_mexicana
ENSTNIG00000000277	-	97	42.077	ENSPREG00000014105	-	83	43.860	Poecilia_reticulata
ENSTNIG00000000277	-	97	45.604	ENSPREG00000001514	zgc:113343	60	45.604	Poecilia_reticulata
ENSTNIG00000000277	-	94	43.787	ENSPREG00000005538	-	72	43.787	Poecilia_reticulata
ENSTNIG00000000277	-	93	37.267	ENSPNYG00000024183	zgc:173577	99	37.267	Pundamilia_nyererei
ENSTNIG00000000277	-	94	51.515	ENSSDUG00000008682	-	74	51.515	Seriola_dumerili
ENSTNIG00000000277	-	84	43.750	ENSSPAG00000009426	-	66	43.750	Stegastes_partitus
ENSTNIG00000000277	-	93	41.808	ENSSPAG00000006539	-	89	41.808	Stegastes_partitus
ENSTNIG00000000277	-	93	48.819	ENSSPAG00000013109	si:ch211-241b2.1	72	46.154	Stegastes_partitus
ENSTNIG00000000277	-	97	45.055	ENSXCOG00000017871	zgc:113343	64	45.055	Xiphophorus_couchianus
ENSTNIG00000000277	-	97	45.055	ENSXMAG00000019923	zgc:113343	62	45.963	Xiphophorus_maculatus