EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000000316 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: rbm4l|wu:fc25a01
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1493 bases
Position: chrUn_random:25453660-25455152
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000000403	zf-CCHC	PF00098.23	2.4e-06	1	1
ENSTNIP00000000403	RRM_5	PF13893.6	2.5e-10	1	1
ENSTNIP00000000403	RRM_1	PF00076.22	4.3e-32	1	2
ENSTNIP00000000403	RRM_1	PF00076.22	4.3e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000002668	-	1137	-	ENSTNIP00000000403	378 (aa)	-	H3BWP0

Gene Model

Click here to download ENSTNIG00000000316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000000316's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000000316	-	96	47.721	ENSTNIG00000004821	rbm4.1	95	45.576

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000000316	-	96	47.722	ENSAPOG00000012353	rbm4.1	96	45.742	Acanthochromis_polyacanthus
ENSTNIG00000000316	-	96	47.482	ENSAOCG00000010915	rbm4.1	96	45.255	Amphiprion_ocellaris
ENSTNIG00000000316	-	96	47.482	ENSAPEG00000009494	rbm4.1	96	45.255	Amphiprion_percula
ENSTNIG00000000316	-	97	47.031	ENSATEG00000001904	rbm4.1	97	47.087	Anabas_testudineus
ENSTNIG00000000316	-	100	67.708	ENSACLG00000007740	-	100	67.708	Astatotilapia_calliptera
ENSTNIG00000000316	-	98	50.529	ENSAMXG00000036611	rbm4.1	97	51.053	Astyanax_mexicanus
ENSTNIG00000000316	-	100	65.296	ENSCSEG00000014359	-	100	65.553	Cynoglossus_semilaevis
ENSTNIG00000000316	-	96	48.515	ENSCSEG00000014365	rbm4.1	97	47.631	Cynoglossus_semilaevis
ENSTNIG00000000316	-	94	46.359	ENSCVAG00000019349	rbm4.1	94	47.980	Cyprinodon_variegatus
ENSTNIG00000000316	-	98	49.275	ENSDARG00000036386	rbm4.1	79	66.667	Danio_rerio
ENSTNIG00000000316	-	98	51.444	ENSDARG00000055080	rbm4.2	97	51.169	Danio_rerio
ENSTNIG00000000316	-	50	58.031	ENSEBUG00000007174	-	97	57.471	Eptatretus_burgeri
ENSTNIG00000000316	-	94	49.250	ENSFHEG00000022926	rbm4.1	94	48.737	Fundulus_heteroclitus
ENSTNIG00000000316	-	92	61.408	ENSGMOG00000007455	-	100	59.536	Gadus_morhua
ENSTNIG00000000316	-	96	45.368	ENSGMOG00000007464	rbm4.1	98	45.673	Gadus_morhua
ENSTNIG00000000316	-	96	48.780	ENSGAFG00000019302	rbm4.1	96	48.522	Gambusia_affinis
ENSTNIG00000000316	-	100	67.102	ENSGACG00000000821	-	100	67.358	Gasterosteus_aculeatus
ENSTNIG00000000316	-	95	46.774	ENSGACG00000000822	rbm4.1	95	47.934	Gasterosteus_aculeatus
ENSTNIG00000000316	-	92	46.475	ENSHCOG00000011403	rbm4.1	95	45.383	Hippocampus_comes
ENSTNIG00000000316	-	93	48.919	ENSIPUG00000022937	rbm4.2	97	49.096	Ictalurus_punctatus
ENSTNIG00000000316	-	100	55.309	ENSKMAG00000006528	-	100	56.204	Kryptolebias_marmoratus
ENSTNIG00000000316	-	96	46.814	ENSKMAG00000006556	rbm4.1	96	47.264	Kryptolebias_marmoratus
ENSTNIG00000000316	-	100	71.466	ENSLBEG00000019756	-	100	71.466	Labrus_bergylta
ENSTNIG00000000316	-	97	46.698	ENSMAMG00000001765	rbm4.1	97	47.087	Mastacembelus_armatus
ENSTNIG00000000316	-	100	70.130	ENSMAMG00000001760	-	100	71.169	Mastacembelus_armatus
ENSTNIG00000000316	-	100	73.560	ENSMALG00000020557	-	100	74.674	Monopterus_albus
ENSTNIG00000000316	-	97	47.981	ENSMALG00000020544	rbm4.1	97	44.928	Monopterus_albus
ENSTNIG00000000316	-	96	45.843	ENSORLG00000012496	rbm4.1	96	45.545	Oryzias_latipes
ENSTNIG00000000316	-	96	45.843	ENSORLG00020012454	rbm4.1	96	45.545	Oryzias_latipes_hni
ENSTNIG00000000316	-	96	45.843	ENSORLG00015013678	rbm4.1	96	45.545	Oryzias_latipes_hsok
ENSTNIG00000000316	-	96	46.081	ENSOMEG00000001001	rbm4.1	96	46.040	Oryzias_melastigma
ENSTNIG00000000316	-	98	45.667	ENSPKIG00000020805	rbm4.1	85	67.391	Paramormyrops_kingsleyae
ENSTNIG00000000316	-	96	48.780	ENSPFOG00000012675	rbm4.1	96	48.522	Poecilia_formosa
ENSTNIG00000000316	-	100	61.125	ENSPFOG00000012685	-	100	60.668	Poecilia_formosa
ENSTNIG00000000316	-	96	48.780	ENSPLAG00000018572	rbm4.1	96	48.522	Poecilia_latipinna
ENSTNIG00000000316	-	96	48.780	ENSPMEG00000006290	rbm4.1	96	48.522	Poecilia_mexicana
ENSTNIG00000000316	-	100	58.247	ENSPREG00000003764	-	100	57.772	Poecilia_reticulata
ENSTNIG00000000316	-	96	48.780	ENSPREG00000003724	rbm4.1	96	48.522	Poecilia_reticulata
ENSTNIG00000000316	-	98	49.869	ENSPNAG00000013057	rbm4.2	99	49.616	Pygocentrus_nattereri
ENSTNIG00000000316	-	98	49.635	ENSPNAG00000002539	rbm4.1	98	47.677	Pygocentrus_nattereri
ENSTNIG00000000316	-	98	48.058	ENSSMAG00000007571	rbm4.1	98	48.293	Scophthalmus_maximus
ENSTNIG00000000316	-	100	74.611	ENSSDUG00000003936	-	100	74.611	Seriola_dumerili
ENSTNIG00000000316	-	100	72.798	ENSSLDG00000013157	-	100	73.834	Seriola_lalandi_dorsalis
ENSTNIG00000000316	-	100	72.063	ENSSPAG00000019046	-	100	72.063	Stegastes_partitus
ENSTNIG00000000316	-	100	93.140	ENSTRUG00000013328	-	100	93.140	Takifugu_rubripes
ENSTNIG00000000316	-	98	45.775	ENSTRUG00000013334	rbm4.1	99	44.869	Takifugu_rubripes
ENSTNIG00000000316	-	96	48.780	ENSXCOG00000003731	rbm4.1	96	48.522	Xiphophorus_couchianus
ENSTNIG00000000316	-	100	59.744	ENSXMAG00000008059	-	100	59.794	Xiphophorus_maculatus
ENSTNIG00000000316	-	96	48.780	ENSXMAG00000008069	rbm4.1	96	48.522	Xiphophorus_maculatus