EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000000320 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3887 bases
Position: chr18:2638635-2642521
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000003293	zf-C2H2	PF00096.26	1.7e-45	1	7
ENSTNIP00000003293	zf-C2H2	PF00096.26	1.7e-45	2	7
ENSTNIP00000003293	zf-C2H2	PF00096.26	1.7e-45	3	7
ENSTNIP00000003293	zf-C2H2	PF00096.26	1.7e-45	4	7
ENSTNIP00000003293	zf-C2H2	PF00096.26	1.7e-45	5	7
ENSTNIP00000003293	zf-C2H2	PF00096.26	1.7e-45	6	7
ENSTNIP00000003293	zf-C2H2	PF00096.26	1.7e-45	7	7
ENSTNIP00000003497	zf-C2H2	PF00096.26	1.1e-44	1	7
ENSTNIP00000003497	zf-C2H2	PF00096.26	1.1e-44	2	7
ENSTNIP00000003497	zf-C2H2	PF00096.26	1.1e-44	3	7
ENSTNIP00000003497	zf-C2H2	PF00096.26	1.1e-44	4	7
ENSTNIP00000003497	zf-C2H2	PF00096.26	1.1e-44	5	7
ENSTNIP00000003497	zf-C2H2	PF00096.26	1.1e-44	6	7
ENSTNIP00000003497	zf-C2H2	PF00096.26	1.1e-44	7	7
ENSTNIP00000003293	zf-met	PF12874.7	7.2e-10	1	1
ENSTNIP00000003497	zf-met	PF12874.7	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000001160	-	939	-	ENSTNIP00000003497	313 (aa)	-	H3C5H8
ENSTNIT00000001879	-	672	-	ENSTNIP00000003293	224 (aa)	-	H3C4X4

Gene Model

Click here to download ENSTNIG00000000320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000000320's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000000320	-	93	31.602	ENSTNIG00000011746	hinfp	58	31.602
ENSTNIG00000000320	-	99	45.122	ENSTNIG00000003834	gfi1b	56	45.122
ENSTNIG00000000320	-	100	55.319	ENSTNIG00000000277	-	93	61.039
ENSTNIG00000000320	-	100	49.107	ENSTNIG00000000330	-	100	49.107
ENSTNIG00000000320	-	100	46.392	ENSTNIG00000008242	-	99	46.392
ENSTNIG00000000320	-	83	44.000	ENSTNIG00000003865	-	58	44.595
ENSTNIG00000000320	-	100	39.568	ENSTNIG00000000073	znf646	97	38.739
ENSTNIG00000000320	-	99	50.617	ENSTNIG00000002344	-	100	50.617
ENSTNIG00000000320	-	100	42.857	ENSTNIG00000002343	-	80	48.101
ENSTNIG00000000320	-	100	51.220	ENSTNIG00000017000	-	100	51.220
ENSTNIG00000000320	-	100	40.000	ENSTNIG00000005798	zbtb16a	56	39.759
ENSTNIG00000000320	-	99	37.805	ENSTNIG00000011367	znf710b	51	37.805
ENSTNIG00000000320	-	100	40.667	ENSTNIG00000012449	zbtb48	51	31.447
ENSTNIG00000000320	-	99	46.429	ENSTNIG00000009831	-	96	46.429
ENSTNIG00000000320	-	100	42.009	ENSTNIG00000010902	zbtb17	59	44.186
ENSTNIG00000000320	-	100	36.429	ENSTNIG00000001159	si:dkey-89b17.4	99	40.260
ENSTNIG00000000320	-	100	48.430	ENSTNIG00000005856	-	98	48.430
ENSTNIG00000000320	-	99	45.902	ENSTNIG00000019069	-	99	45.902
ENSTNIG00000000320	-	100	36.652	ENSTNIG00000003880	znf319b	85	39.378
ENSTNIG00000000320	-	97	44.737	ENSTNIG00000012473	scrt2	58	44.737
ENSTNIG00000000320	-	99	43.030	ENSTNIG00000014443	prdm9	64	38.554
ENSTNIG00000000320	-	97	42.169	ENSTNIG00000018384	scrt1b	55	42.169
ENSTNIG00000000320	-	99	44.048	ENSTNIG00000008154	-	99	44.048
ENSTNIG00000000320	-	85	42.857	ENSTNIG00000017808	-	55	38.235
ENSTNIG00000000320	-	100	40.541	ENSTNIG00000000528	-	96	42.857
ENSTNIG00000000320	-	99	42.857	ENSTNIG00000007805	zbtb41	50	42.857
ENSTNIG00000000320	-	100	39.086	ENSTNIG00000008100	-	100	46.154
ENSTNIG00000000320	-	99	50.617	ENSTNIG00000003479	-	100	50.633
ENSTNIG00000000320	-	100	44.444	ENSTNIG00000008200	-	90	43.721
ENSTNIG00000000320	-	97	45.455	ENSTNIG00000008504	snai2	53	46.053
ENSTNIG00000000320	-	99	35.484	ENSTNIG00000008583	PRDM15	53	31.250
ENSTNIG00000000320	-	100	38.182	ENSTNIG00000001921	-	64	38.182
ENSTNIG00000000320	-	100	36.073	ENSTNIG00000005901	prdm5	74	37.209
ENSTNIG00000000320	-	100	50.459	ENSTNIG00000018984	-	98	50.459
ENSTNIG00000000320	-	99	35.484	ENSTNIG00000004148	-	54	30.846
ENSTNIG00000000320	-	100	46.377	ENSTNIG00000010722	GZF1	51	43.182
ENSTNIG00000000320	-	100	41.333	ENSTNIG00000011188	-	98	41.333
ENSTNIG00000000320	-	99	44.828	ENSTNIG00000005023	-	100	44.828
ENSTNIG00000000320	-	100	48.205	ENSTNIG00000000934	-	96	48.205
ENSTNIG00000000320	-	96	51.923	ENSTNIG00000013008	-	98	46.429
ENSTNIG00000000320	-	100	43.043	ENSTNIG00000001164	ZNF628	97	43.043
ENSTNIG00000000320	-	99	45.729	ENSTNIG00000005479	-	99	45.729
ENSTNIG00000000320	-	100	46.897	ENSTNIG00000003979	-	99	45.872
ENSTNIG00000000320	-	99	45.455	ENSTNIG00000005051	znf341	57	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000000320	-	100	45.249	ENSAPOG00000004328	-	89	44.681	Acanthochromis_polyacanthus
ENSTNIG00000000320	-	100	41.284	ENSACIG00000010739	-	96	33.445	Amphilophus_citrinellus
ENSTNIG00000000320	-	100	44.915	ENSAOCG00000007045	-	87	44.681	Amphiprion_ocellaris
ENSTNIG00000000320	-	98	46.914	ENSAPEG00000001596	-	76	46.914	Amphiprion_percula
ENSTNIG00000000320	-	100	42.986	ENSAPEG00000016483	-	59	45.333	Amphiprion_percula
ENSTNIG00000000320	-	100	45.495	ENSATEG00000006085	-	87	45.495	Anabas_testudineus
ENSTNIG00000000320	-	100	50.446	ENSACAG00000000082	-	99	50.446	Anolis_carolinensis
ENSTNIG00000000320	-	100	47.768	ENSACAG00000025537	-	97	47.768	Anolis_carolinensis
ENSTNIG00000000320	-	100	52.055	ENSAMXG00000035949	-	84	42.564	Astyanax_mexicanus
ENSTNIG00000000320	-	100	50.893	ENSAMXG00000026143	-	93	50.893	Astyanax_mexicanus
ENSTNIG00000000320	-	100	49.020	ENSAMXG00000033013	-	81	47.196	Astyanax_mexicanus
ENSTNIG00000000320	-	100	51.759	ENSAMXG00000012873	-	94	49.123	Astyanax_mexicanus
ENSTNIG00000000320	-	100	49.554	ENSAMXG00000032237	-	92	49.554	Astyanax_mexicanus
ENSTNIG00000000320	-	100	52.336	ENSAMXG00000035145	-	63	52.336	Astyanax_mexicanus
ENSTNIG00000000320	-	100	47.489	ENSAMXG00000036257	-	92	46.875	Astyanax_mexicanus
ENSTNIG00000000320	-	100	43.373	ENSCVAG00000011235	-	86	47.748	Cyprinodon_variegatus
ENSTNIG00000000320	-	100	51.648	ENSELUG00000013357	-	88	51.282	Esox_lucius
ENSTNIG00000000320	-	99	48.101	ENSELUG00000013844	-	79	41.333	Esox_lucius
ENSTNIG00000000320	-	100	45.982	ENSELUG00000021287	-	81	45.982	Esox_lucius
ENSTNIG00000000320	-	100	47.674	ENSFHEG00000019915	-	74	45.778	Fundulus_heteroclitus
ENSTNIG00000000320	-	100	46.667	ENSGMOG00000003238	-	99	48.148	Gadus_morhua
ENSTNIG00000000320	-	100	45.946	ENSGAFG00000012977	-	89	45.946	Gambusia_affinis
ENSTNIG00000000320	-	100	43.874	ENSGAFG00000003150	-	94	46.667	Gambusia_affinis
ENSTNIG00000000320	-	100	50.833	ENSIPUG00000021556	-	84	50.833	Ictalurus_punctatus
ENSTNIG00000000320	-	100	50.943	ENSIPUG00000004428	-	77	49.367	Ictalurus_punctatus
ENSTNIG00000000320	-	100	47.982	ENSIPUG00000006916	-	75	48.718	Ictalurus_punctatus
ENSTNIG00000000320	-	100	44.144	ENSKMAG00000004988	-	84	44.144	Kryptolebias_marmoratus
ENSTNIG00000000320	-	99	54.762	ENSLOCG00000014144	-	100	51.111	Lepisosteus_oculatus
ENSTNIG00000000320	-	100	48.276	ENSLOCG00000014366	-	95	48.276	Lepisosteus_oculatus
ENSTNIG00000000320	-	100	43.478	ENSMAMG00000016542	-	62	46.222	Mastacembelus_armatus
ENSTNIG00000000320	-	100	47.541	ENSMAMG00000019301	-	93	47.541	Mastacembelus_armatus
ENSTNIG00000000320	-	100	55.340	ENSMMOG00000009852	-	92	50.000	Mola_mola
ENSTNIG00000000320	-	100	49.630	ENSMALG00000005554	-	95	44.444	Monopterus_albus
ENSTNIG00000000320	-	99	53.448	ENSOCUG00000005876	-	100	53.448	Oryctolagus_cuniculus
ENSTNIG00000000320	-	100	45.810	ENSPKIG00000006616	-	57	47.788	Paramormyrops_kingsleyae
ENSTNIG00000000320	-	99	43.878	ENSPMGG00000017633	-	94	43.878	Periophthalmus_magnuspinnatus
ENSTNIG00000000320	-	100	46.396	ENSPFOG00000010682	-	98	44.681	Poecilia_formosa
ENSTNIG00000000320	-	100	40.838	ENSPLAG00000002892	-	69	39.076	Poecilia_latipinna
ENSTNIG00000000320	-	100	46.396	ENSPMEG00000001399	-	89	46.396	Poecilia_mexicana
ENSTNIG00000000320	-	100	46.396	ENSPREG00000001386	-	89	46.396	Poecilia_reticulata
ENSTNIG00000000320	-	100	40.152	ENSPREG00000002582	-	60	42.857	Poecilia_reticulata
ENSTNIG00000000320	-	100	50.893	ENSPNAG00000000219	-	85	50.893	Pygocentrus_nattereri
ENSTNIG00000000320	-	100	49.554	ENSPNAG00000015116	-	67	49.554	Pygocentrus_nattereri
ENSTNIG00000000320	-	100	43.304	ENSPNAG00000025570	-	82	43.304	Pygocentrus_nattereri
ENSTNIG00000000320	-	100	49.554	ENSSFOG00015006108	-	56	49.772	Scleropages_formosus
ENSTNIG00000000320	-	100	56.250	ENSSMAG00000009115	-	92	60.000	Scophthalmus_maximus
ENSTNIG00000000320	-	100	45.701	ENSSDUG00000006463	-	86	45.701	Seriola_dumerili
ENSTNIG00000000320	-	99	52.439	ENSSDUG00000002195	-	99	56.897	Seriola_dumerili
ENSTNIG00000000320	-	99	90.000	ENSSLDG00000020727	-	88	90.000	Seriola_lalandi_dorsalis
ENSTNIG00000000320	-	100	44.068	ENSSLDG00000006724	-	97	43.571	Seriola_lalandi_dorsalis
ENSTNIG00000000320	-	100	45.500	ENSSPAG00000012960	-	79	45.500	Stegastes_partitus
ENSTNIG00000000320	-	99	88.889	ENSSPAG00000021008	-	91	88.889	Stegastes_partitus
ENSTNIG00000000320	-	100	47.917	ENSTRUG00000005321	-	96	47.826	Takifugu_rubripes
ENSTNIG00000000320	-	100	44.928	ENSTRUG00000021675	-	77	45.802	Takifugu_rubripes
ENSTNIG00000000320	-	100	50.459	ENSXETG00000006575	znf420	76	50.459	Xenopus_tropicalis
ENSTNIG00000000320	-	100	50.794	ENSXCOG00000009665	-	84	53.247	Xiphophorus_couchianus
ENSTNIG00000000320	-	100	45.763	ENSXMAG00000028625	-	89	45.946	Xiphophorus_maculatus