EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000000334 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1828 bases
Position: chrUn_random:79754753-79756580
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000003574	RRM_1	PF00076.22	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000003914	-	803	-	ENSTNIP00000003574	261 (aa)	-	H3C5Q4

Gene Model

Click here to download ENSTNIG00000000334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000000334's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000000334	-	84	54.237	ENSTNIG00000005594	-	82	52.991
ENSTNIG00000000334	-	94	68.045	ENSTNIG00000007427	-	83	67.954

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000000334	-	99	51.103	ENSG00000184672	RALYL	93	79.747	Homo_sapiens
ENSTNIG00000000334	-	93	80.159	ENSAPOG00000006963	hnrnpc	82	80.315	Acanthochromis_polyacanthus
ENSTNIG00000000334	-	94	79.845	ENSACIG00000000270	-	82	83.871	Amphilophus_citrinellus
ENSTNIG00000000334	-	94	77.395	ENSACIG00000016568	-	91	72.510	Amphilophus_citrinellus
ENSTNIG00000000334	-	93	80.159	ENSAOCG00000003896	-	82	80.315	Amphiprion_ocellaris
ENSTNIG00000000334	-	93	78.599	ENSAOCG00000021616	-	79	80.709	Amphiprion_ocellaris
ENSTNIG00000000334	-	94	78.544	ENSAPEG00000019962	-	81	80.315	Amphiprion_percula
ENSTNIG00000000334	-	93	80.159	ENSAPEG00000001489	-	82	80.315	Amphiprion_percula
ENSTNIG00000000334	-	94	80.156	ENSATEG00000011734	-	85	79.608	Anabas_testudineus
ENSTNIG00000000334	-	94	78.707	ENSATEG00000018006	-	79	82.028	Anabas_testudineus
ENSTNIG00000000334	-	99	48.410	ENSAPLG00000015574	RALYL	80	51.489	Anas_platyrhynchos
ENSTNIG00000000334	-	99	48.399	ENSACAG00000028464	RALYL	79	51.489	Anolis_carolinensis
ENSTNIG00000000334	-	99	51.471	ENSANAG00000023383	RALYL	78	54.667	Aotus_nancymaae
ENSTNIG00000000334	-	93	73.643	ENSACLG00000013636	-	84	76.078	Astatotilapia_calliptera
ENSTNIG00000000334	-	94	76.336	ENSACLG00000005707	-	86	78.175	Astatotilapia_calliptera
ENSTNIG00000000334	-	93	74.031	ENSACLG00000000995	-	93	70.934	Astatotilapia_calliptera
ENSTNIG00000000334	-	90	58.130	ENSAMXG00000042946	hnrnpc	97	69.634	Astyanax_mexicanus
ENSTNIG00000000334	-	94	71.373	ENSAMXG00000034915	zgc:55733	87	72.691	Astyanax_mexicanus
ENSTNIG00000000334	-	99	51.103	ENSCJAG00000000402	RALYL	78	53.778	Callithrix_jacchus
ENSTNIG00000000334	-	99	47.482	ENSCPOG00000012314	RALYL	79	52.564	Cavia_porcellus
ENSTNIG00000000334	-	99	51.103	ENSCCAG00000025003	RALYL	77	79.747	Cebus_capucinus
ENSTNIG00000000334	-	99	51.103	ENSCATG00000042145	RALYL	78	54.222	Cercocebus_atys
ENSTNIG00000000334	-	99	47.482	ENSCLAG00000005228	RALYL	79	52.564	Chinchilla_lanigera
ENSTNIG00000000334	-	77	52.466	ENSCHOG00000013228	RALYL	75	50.673	Choloepus_hoffmanni
ENSTNIG00000000334	-	82	55.357	ENSCANG00000039144	RALYL	78	54.222	Colobus_angolensis_palliatus
ENSTNIG00000000334	-	99	48.043	ENSCGRG00001009241	Ralyl	79	51.915	Cricetulus_griseus_chok1gshd
ENSTNIG00000000334	-	89	76.113	ENSCSEG00000021349	-	92	70.103	Cynoglossus_semilaevis
ENSTNIG00000000334	-	79	71.493	ENSCSEG00000019769	-	73	73.611	Cynoglossus_semilaevis
ENSTNIG00000000334	-	93	78.906	ENSCVAG00000016981	-	78	79.051	Cyprinodon_variegatus
ENSTNIG00000000334	-	99	63.235	ENSCVAG00000002797	-	85	61.479	Cyprinodon_variegatus
ENSTNIG00000000334	-	94	70.866	ENSDARG00000103845	zgc:55733	91	73.387	Danio_rerio
ENSTNIG00000000334	-	87	78.298	ENSDARG00000053810	hnrnpc	79	73.413	Danio_rerio
ENSTNIG00000000334	-	99	48.763	ENSDORG00000003721	Ralyl	79	51.915	Dipodomys_ordii
ENSTNIG00000000334	-	55	59.740	ENSETEG00000014028	RALYL	79	61.688	Echinops_telfairi
ENSTNIG00000000334	-	79	49.533	ENSEBUG00000006049	RALYL	75	49.533	Eptatretus_burgeri
ENSTNIG00000000334	-	78	46.847	ENSEBUG00000012363	hnrnpc	67	43.882	Eptatretus_burgeri
ENSTNIG00000000334	-	99	49.645	ENSEEUG00000007202	RALYL	80	52.991	Erinaceus_europaeus
ENSTNIG00000000334	-	89	72.266	ENSELUG00000007714	-	90	69.925	Esox_lucius
ENSTNIG00000000334	-	97	74.621	ENSELUG00000004132	-	87	74.031	Esox_lucius
ENSTNIG00000000334	-	99	47.872	ENSFALG00000008647	RALYL	97	54.884	Ficedula_albicollis
ENSTNIG00000000334	-	94	75.636	ENSFHEG00000007278	-	82	75.373	Fundulus_heteroclitus
ENSTNIG00000000334	-	98	72.285	ENSFHEG00000003605	-	83	72.266	Fundulus_heteroclitus
ENSTNIG00000000334	-	82	53.982	ENSGALG00000036938	RALYL	79	51.489	Gallus_gallus
ENSTNIG00000000334	-	98	71.910	ENSGAFG00000020486	-	81	75.576	Gambusia_affinis
ENSTNIG00000000334	-	94	77.692	ENSGAFG00000020992	-	82	78.800	Gambusia_affinis
ENSTNIG00000000334	-	95	75.758	ENSGACG00000017772	-	96	77.291	Gasterosteus_aculeatus
ENSTNIG00000000334	-	79	68.468	ENSGACG00000018932	-	86	64.414	Gasterosteus_aculeatus
ENSTNIG00000000334	-	99	51.103	ENSGGOG00000000841	RALYL	78	54.222	Gorilla_gorilla
ENSTNIG00000000334	-	94	76.718	ENSHBUG00000010527	-	80	78.431	Haplochromis_burtoni
ENSTNIG00000000334	-	93	74.419	ENSHBUG00000018342	-	93	71.280	Haplochromis_burtoni
ENSTNIG00000000334	-	99	47.482	ENSHGLG00000004866	RALYL	79	52.564	Heterocephalus_glaber_female
ENSTNIG00000000334	-	99	47.482	ENSHGLG00100017480	RALYL	79	52.564	Heterocephalus_glaber_male
ENSTNIG00000000334	-	92	75.000	ENSHCOG00000012333	hnrnpc	87	73.684	Hippocampus_comes
ENSTNIG00000000334	-	94	73.705	ENSIPUG00000008666	zgc:55733	93	74.528	Ictalurus_punctatus
ENSTNIG00000000334	-	93	70.930	ENSIPUG00000011271	hnrnpc	97	73.991	Ictalurus_punctatus
ENSTNIG00000000334	-	99	47.312	ENSSTOG00000012583	RALYL	81	51.915	Ictidomys_tridecemlineatus
ENSTNIG00000000334	-	99	76.952	ENSKMAG00000011170	-	82	77.953	Kryptolebias_marmoratus
ENSTNIG00000000334	-	93	76.357	ENSKMAG00000018265	-	79	78.039	Kryptolebias_marmoratus
ENSTNIG00000000334	-	99	69.675	ENSLBEG00000024418	-	96	64.726	Labrus_bergylta
ENSTNIG00000000334	-	93	77.606	ENSLBEG00000006193	-	80	79.134	Labrus_bergylta
ENSTNIG00000000334	-	97	71.321	ENSLBEG00000006979	-	96	67.143	Labrus_bergylta
ENSTNIG00000000334	-	94	62.891	ENSLOCG00000002560	hnrnpc	87	64.286	Lepisosteus_oculatus
ENSTNIG00000000334	-	99	51.103	ENSMNEG00000033288	RALYL	78	54.222	Macaca_nemestrina
ENSTNIG00000000334	-	99	51.103	ENSMLEG00000038284	RALYL	78	54.222	Mandrillus_leucophaeus
ENSTNIG00000000334	-	93	80.952	ENSMAMG00000012236	-	81	81.102	Mastacembelus_armatus
ENSTNIG00000000334	-	94	76.806	ENSMAMG00000008033	-	89	78.516	Mastacembelus_armatus
ENSTNIG00000000334	-	93	74.031	ENSMZEG00005020460	-	93	70.934	Maylandia_zebra
ENSTNIG00000000334	-	94	76.336	ENSMZEG00005024249	-	80	78.175	Maylandia_zebra
ENSTNIG00000000334	-	99	48.043	ENSMAUG00000015149	Ralyl	79	51.915	Mesocricetus_auratus
ENSTNIG00000000334	-	99	50.183	ENSMICG00000005558	RALYL	80	79.747	Microcebus_murinus
ENSTNIG00000000334	-	99	48.399	ENSMOCG00000017371	Ralyl	88	49.231	Microtus_ochrogaster
ENSTNIG00000000334	-	94	73.946	ENSMMOG00000021465	-	88	77.953	Mola_mola
ENSTNIG00000000334	-	92	79.134	ENSMMOG00000019520	-	83	81.928	Mola_mola
ENSTNIG00000000334	-	94	70.472	ENSMALG00000007520	-	84	73.016	Monopterus_albus
ENSTNIG00000000334	-	94	83.465	ENSMALG00000014623	-	80	83.730	Monopterus_albus
ENSTNIG00000000334	-	99	47.687	ENSMUSG00000039717	Ralyl	93	78.481	Mus_musculus
ENSTNIG00000000334	-	99	47.670	ENSMPUG00000010724	RALYL	79	51.064	Mustela_putorius_furo
ENSTNIG00000000334	-	99	48.043	ENSNGAG00000013375	Ralyl	79	51.915	Nannospalax_galili
ENSTNIG00000000334	-	94	76.718	ENSNBRG00000015676	-	80	78.431	Neolamprologus_brichardi
ENSTNIG00000000334	-	94	74.809	ENSNBRG00000004912	-	99	72.458	Neolamprologus_brichardi
ENSTNIG00000000334	-	99	51.103	ENSNLEG00000002702	RALYL	75	54.222	Nomascus_leucogenys
ENSTNIG00000000334	-	66	48.691	ENSOPRG00000013650	-	98	46.316	Ochotona_princeps
ENSTNIG00000000334	-	99	48.387	ENSODEG00000001012	RALYL	79	52.991	Octodon_degus
ENSTNIG00000000334	-	94	76.718	ENSONIG00000018350	-	80	78.431	Oreochromis_niloticus
ENSTNIG00000000334	-	93	75.194	ENSONIG00000007859	-	90	71.483	Oreochromis_niloticus
ENSTNIG00000000334	-	93	68.504	ENSORLG00000009999	-	93	65.972	Oryzias_latipes
ENSTNIG00000000334	-	93	75.379	ENSORLG00000003144	-	79	77.011	Oryzias_latipes
ENSTNIG00000000334	-	93	68.110	ENSORLG00020018228	hnrnpc	93	65.625	Oryzias_latipes_hni
ENSTNIG00000000334	-	93	68.504	ENSORLG00015019755	-	93	65.972	Oryzias_latipes_hsok
ENSTNIG00000000334	-	93	75.379	ENSORLG00015009460	-	78	77.011	Oryzias_latipes_hsok
ENSTNIG00000000334	-	93	70.079	ENSOMEG00000020488	-	93	66.667	Oryzias_melastigma
ENSTNIG00000000334	-	93	78.210	ENSOMEG00000022665	-	79	79.921	Oryzias_melastigma
ENSTNIG00000000334	-	99	51.103	ENSPPAG00000038705	RALYL	78	54.222	Pan_paniscus
ENSTNIG00000000334	-	99	49.815	ENSPPRG00000018612	RALYL	78	53.304	Panthera_pardus
ENSTNIG00000000334	-	99	49.815	ENSPTIG00000020331	RALYL	78	53.304	Panthera_tigris_altaica
ENSTNIG00000000334	-	99	51.103	ENSPTRG00000020381	RALYL	78	54.222	Pan_troglodytes
ENSTNIG00000000334	-	99	51.103	ENSPANG00000029305	RALYL	78	54.222	Papio_anubis
ENSTNIG00000000334	-	94	72.624	ENSPKIG00000008592	-	92	66.667	Paramormyrops_kingsleyae
ENSTNIG00000000334	-	84	77.155	ENSPKIG00000022837	-	80	72.157	Paramormyrops_kingsleyae
ENSTNIG00000000334	-	98	48.201	ENSPSIG00000011135	RALYL	79	51.064	Pelodiscus_sinensis
ENSTNIG00000000334	-	75	75.122	ENSPMGG00000017774	-	88	63.107	Periophthalmus_magnuspinnatus
ENSTNIG00000000334	-	79	82.326	ENSPMGG00000013144	-	81	79.343	Periophthalmus_magnuspinnatus
ENSTNIG00000000334	-	99	48.043	ENSPEMG00000016447	Ralyl	79	51.915	Peromyscus_maniculatus_bairdii
ENSTNIG00000000334	-	77	53.363	ENSPMAG00000002407	RALYL	97	51.802	Petromyzon_marinus
ENSTNIG00000000334	-	93	77.734	ENSPFOG00000002643	-	80	78.210	Poecilia_formosa
ENSTNIG00000000334	-	98	74.906	ENSPFOG00000001583	-	83	75.000	Poecilia_formosa
ENSTNIG00000000334	-	98	73.408	ENSPLAG00000015305	-	83	73.438	Poecilia_latipinna
ENSTNIG00000000334	-	93	77.734	ENSPLAG00000000061	-	78	79.447	Poecilia_latipinna
ENSTNIG00000000334	-	93	77.344	ENSPMEG00000016524	-	78	79.051	Poecilia_mexicana
ENSTNIG00000000334	-	98	74.532	ENSPMEG00000004802	-	83	74.219	Poecilia_mexicana
ENSTNIG00000000334	-	93	74.409	ENSPREG00000007928	-	83	73.438	Poecilia_reticulata
ENSTNIG00000000334	-	93	77.344	ENSPREG00000001852	-	85	79.051	Poecilia_reticulata
ENSTNIG00000000334	-	98	48.029	ENSPVAG00000010821	RALYL	85	49.206	Pteropus_vampyrus
ENSTNIG00000000334	-	94	76.718	ENSPNYG00000003747	-	86	78.431	Pundamilia_nyererei
ENSTNIG00000000334	-	94	74.427	ENSPNYG00000020293	-	86	76.471	Pundamilia_nyererei
ENSTNIG00000000334	-	87	74.167	ENSPNAG00000015686	hnrnpc	85	73.810	Pygocentrus_nattereri
ENSTNIG00000000334	-	89	69.323	ENSPNAG00000019200	zgc:55733	80	67.073	Pygocentrus_nattereri
ENSTNIG00000000334	-	99	51.103	ENSRROG00000023925	RALYL	82	77.778	Rhinopithecus_roxellana
ENSTNIG00000000334	-	94	66.667	ENSSFOG00015012015	-	82	75.576	Scleropages_formosus
ENSTNIG00000000334	-	93	71.863	ENSSFOG00015012924	-	80	97.468	Scleropages_formosus
ENSTNIG00000000334	-	92	78.656	ENSSMAG00000011147	-	79	80.556	Scophthalmus_maximus
ENSTNIG00000000334	-	93	76.190	ENSSMAG00000013592	-	80	77.108	Scophthalmus_maximus
ENSTNIG00000000334	-	94	79.923	ENSSDUG00000006730	-	80	84.921	Seriola_dumerili
ENSTNIG00000000334	-	97	78.409	ENSSDUG00000001723	-	94	73.883	Seriola_dumerili
ENSTNIG00000000334	-	94	79.923	ENSSLDG00000007474	-	87	84.921	Seriola_lalandi_dorsalis
ENSTNIG00000000334	-	97	78.788	ENSSLDG00000007454	-	83	81.102	Seriola_lalandi_dorsalis
ENSTNIG00000000334	-	74	74.038	ENSSARG00000002374	RALYL	60	63.780	Sorex_araneus
ENSTNIG00000000334	-	97	79.167	ENSSPAG00000023204	-	82	81.496	Stegastes_partitus
ENSTNIG00000000334	-	94	78.927	ENSSPAG00000013996	-	80	80.709	Stegastes_partitus
ENSTNIG00000000334	-	99	48.227	ENSTGUG00000011689	RALYL	79	52.174	Taeniopygia_guttata
ENSTNIG00000000334	-	94	72.308	ENSTRUG00000020158	-	83	77.866	Takifugu_rubripes
ENSTNIG00000000334	-	86	45.902	ENSTBEG00000005551	RALYL	97	45.161	Tupaia_belangeri
ENSTNIG00000000334	-	99	48.014	ENSTTRG00000015762	RALYL	79	50.218	Tursiops_truncatus
ENSTNIG00000000334	-	99	46.520	ENSVPAG00000008501	RALYL	79	49.115	Vicugna_pacos
ENSTNIG00000000334	-	61	84.242	ENSXCOG00000019434	-	65	88.889	Xiphophorus_couchianus
ENSTNIG00000000334	-	98	68.284	ENSXCOG00000006552	-	81	67.589	Xiphophorus_couchianus
ENSTNIG00000000334	-	98	73.408	ENSXMAG00000009333	-	83	73.438	Xiphophorus_maculatus
ENSTNIG00000000334	-	93	76.953	ENSXMAG00000022849	-	82	78.656	Xiphophorus_maculatus