EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000000528 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1476 bases
Position: chr8:6000546-6002021
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000001363	zf-C2H2	PF00096.26	2.2e-37	1	6
ENSTNIP00000001363	zf-C2H2	PF00096.26	2.2e-37	2	6
ENSTNIP00000001363	zf-C2H2	PF00096.26	2.2e-37	3	6
ENSTNIP00000001363	zf-C2H2	PF00096.26	2.2e-37	4	6
ENSTNIP00000001363	zf-C2H2	PF00096.26	2.2e-37	5	6
ENSTNIP00000001363	zf-C2H2	PF00096.26	2.2e-37	6	6
ENSTNIP00000001363	zf-met	PF12874.7	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000001072	-	1050	-	ENSTNIP00000001363	350 (aa)	-	H3BZE7

Gene Model

Click here to download ENSTNIG00000000528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000000528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000000528	-	96	35.030	ENSTNIG00000011188	-	98	35.030
ENSTNIG00000000528	-	96	42.857	ENSTNIG00000000320	-	100	40.541
ENSTNIG00000000528	-	99	30.939	ENSTNIG00000008583	PRDM15	54	30.645
ENSTNIG00000000528	-	95	31.677	ENSTNIG00000003865	-	88	31.646
ENSTNIG00000000528	-	97	36.364	ENSTNIG00000018001	e4f1	60	36.310
ENSTNIG00000000528	-	100	32.593	ENSTNIG00000008504	snai2	59	32.593
ENSTNIG00000000528	-	96	40.385	ENSTNIG00000000934	-	100	40.385
ENSTNIG00000000528	-	99	32.000	ENSTNIG00000007805	zbtb41	51	32.000
ENSTNIG00000000528	-	100	38.009	ENSTNIG00000009831	-	96	38.009
ENSTNIG00000000528	-	99	39.855	ENSTNIG00000005023	-	100	40.123
ENSTNIG00000000528	-	96	36.653	ENSTNIG00000008200	-	100	39.462
ENSTNIG00000000528	-	99	30.939	ENSTNIG00000004148	-	54	30.645
ENSTNIG00000000528	-	96	39.506	ENSTNIG00000003479	-	100	39.506
ENSTNIG00000000528	-	95	40.000	ENSTNIG00000012473	scrt2	54	40.000
ENSTNIG00000000528	-	95	38.806	ENSTNIG00000018384	scrt1b	53	38.806
ENSTNIG00000000528	-	97	32.632	ENSTNIG00000005047	si:ch211-216l23.1	64	32.632
ENSTNIG00000000528	-	99	32.886	ENSTNIG00000000073	znf646	99	32.886
ENSTNIG00000000528	-	100	43.333	ENSTNIG00000000330	-	100	43.333
ENSTNIG00000000528	-	98	43.976	ENSTNIG00000000277	-	94	43.976
ENSTNIG00000000528	-	96	37.870	ENSTNIG00000018984	-	99	37.870
ENSTNIG00000000528	-	97	35.200	ENSTNIG00000005798	zbtb16a	52	35.200
ENSTNIG00000000528	-	97	35.673	ENSTNIG00000019069	-	100	35.673
ENSTNIG00000000528	-	99	30.163	ENSTNIG00000001159	si:dkey-89b17.4	99	30.579
ENSTNIG00000000528	-	96	37.156	ENSTNIG00000002344	-	100	37.156
ENSTNIG00000000528	-	96	36.842	ENSTNIG00000002343	-	83	36.842
ENSTNIG00000000528	-	89	37.037	ENSTNIG00000017000	-	100	37.037
ENSTNIG00000000528	-	96	37.380	ENSTNIG00000005856	-	99	37.380
ENSTNIG00000000528	-	99	36.134	ENSTNIG00000008242	-	99	38.235
ENSTNIG00000000528	-	96	36.161	ENSTNIG00000011367	znf710b	52	36.161
ENSTNIG00000000528	-	96	38.073	ENSTNIG00000005479	-	99	38.073
ENSTNIG00000000528	-	95	33.480	ENSTNIG00000012449	zbtb48	51	33.480
ENSTNIG00000000528	-	96	43.005	ENSTNIG00000001164	ZNF628	99	38.348
ENSTNIG00000000528	-	100	33.193	ENSTNIG00000008154	-	99	30.725
ENSTNIG00000000528	-	98	33.702	ENSTNIG00000003880	znf319b	96	33.702
ENSTNIG00000000528	-	99	32.423	ENSTNIG00000008100	-	100	34.359
ENSTNIG00000000528	-	96	36.196	ENSTNIG00000001401	zbtb47b	54	36.196
ENSTNIG00000000528	-	95	37.349	ENSTNIG00000001921	-	64	37.349
ENSTNIG00000000528	-	96	38.264	ENSTNIG00000003979	-	99	38.264
ENSTNIG00000000528	-	96	40.719	ENSTNIG00000003834	gfi1b	52	40.719
ENSTNIG00000000528	-	97	35.021	ENSTNIG00000010722	GZF1	53	35.021

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000000528	-	96	41.964	ENSACAG00000026906	-	98	41.964	Anolis_carolinensis
ENSTNIG00000000528	-	96	41.000	ENSACAG00000027001	-	99	41.000	Anolis_carolinensis
ENSTNIG00000000528	-	100	38.700	ENSACAG00000026916	-	80	38.988	Anolis_carolinensis
ENSTNIG00000000528	-	93	43.939	ENSAMXG00000038122	-	94	43.939	Astyanax_mexicanus
ENSTNIG00000000528	-	96	40.191	ENSAMXG00000014745	-	84	40.191	Astyanax_mexicanus
ENSTNIG00000000528	-	96	37.931	ENSELUG00000000485	-	87	37.931	Esox_lucius
ENSTNIG00000000528	-	96	35.246	ENSELUG00000013806	-	65	35.246	Esox_lucius
ENSTNIG00000000528	-	96	34.268	ENSELUG00000011838	-	66	34.572	Esox_lucius
ENSTNIG00000000528	-	96	39.502	ENSELUG00000021525	-	70	39.502	Esox_lucius
ENSTNIG00000000528	-	98	35.054	ENSELUG00000018970	-	82	35.054	Esox_lucius
ENSTNIG00000000528	-	99	37.349	ENSGACG00000001523	-	99	37.349	Gasterosteus_aculeatus
ENSTNIG00000000528	-	96	36.392	ENSHBUG00000016384	-	82	36.392	Haplochromis_burtoni
ENSTNIG00000000528	-	96	38.996	ENSHCOG00000001629	-	63	38.996	Hippocampus_comes
ENSTNIG00000000528	-	96	36.522	ENSHCOG00000017456	-	84	36.522	Hippocampus_comes
ENSTNIG00000000528	-	96	38.224	ENSLBEG00000013235	-	81	38.224	Labrus_bergylta
ENSTNIG00000000528	-	99	35.000	ENSMGAG00000016603	-	100	35.000	Meleagris_gallopavo
ENSTNIG00000000528	-	96	40.299	ENSPNAG00000009176	-	89	40.299	Pygocentrus_nattereri
ENSTNIG00000000528	-	96	40.433	ENSPNAG00000009184	-	83	38.988	Pygocentrus_nattereri
ENSTNIG00000000528	-	100	39.831	ENSSFOG00015020993	-	85	39.205	Scleropages_formosus
ENSTNIG00000000528	-	95	36.820	ENSXMAG00000020042	-	63	36.820	Xiphophorus_maculatus