EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000000740 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1104 bases
Position: chrUn_random:25397073-25398176
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000003406	zf-CCCH	PF00642.24	1.9e-27	1	3
ENSTNIP00000003406	zf-CCCH	PF00642.24	1.9e-27	2	3
ENSTNIP00000003406	zf-CCCH	PF00642.24	1.9e-27	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000000574	-	954	-	ENSTNIP00000003406	317 (aa)	-	H3C587

Gene Model

Click here to download ENSTNIG00000000740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000000740's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000000740	cth1	89	59.507	ENSAPOG00000012552	cth1	94	61.620	Acanthochromis_polyacanthus
ENSTNIG00000000740	cth1	89	61.189	ENSACIG00000016026	cth1	99	60.494	Amphilophus_citrinellus
ENSTNIG00000000740	cth1	100	62.696	ENSAOCG00000001644	cth1	100	63.636	Amphiprion_ocellaris
ENSTNIG00000000740	cth1	100	62.696	ENSAPEG00000008930	cth1	100	63.636	Amphiprion_percula
ENSTNIG00000000740	cth1	99	65.741	ENSATEG00000002281	cth1	97	67.901	Anabas_testudineus
ENSTNIG00000000740	cth1	90	58.333	ENSACLG00000015353	cth1	95	59.375	Astatotilapia_calliptera
ENSTNIG00000000740	cth1	97	52.322	ENSAMXG00000025717	cth1	98	53.583	Astyanax_mexicanus
ENSTNIG00000000740	cth1	100	63.385	ENSCSEG00000014617	cth1	100	64.832	Cynoglossus_semilaevis
ENSTNIG00000000740	cth1	99	57.278	ENSCVAG00000001680	cth1	65	57.680	Cyprinodon_variegatus
ENSTNIG00000000740	cth1	91	51.678	ENSDARG00000057328	cth1	96	52.050	Danio_rerio
ENSTNIG00000000740	cth1	99	52.286	ENSELUG00000012738	cth1	99	52.924	Esox_lucius
ENSTNIG00000000740	cth1	100	58.307	ENSFHEG00000022665	cth1	100	57.367	Fundulus_heteroclitus
ENSTNIG00000000740	cth1	99	57.362	ENSGMOG00000007360	cth1	100	56.966	Gadus_morhua
ENSTNIG00000000740	cth1	100	58.621	ENSGAFG00000019288	cth1	100	58.621	Gambusia_affinis
ENSTNIG00000000740	cth1	99	60.312	ENSGACG00000000802	cth1	99	59.688	Gasterosteus_aculeatus
ENSTNIG00000000740	cth1	100	58.750	ENSHBUG00000014400	cth1	100	59.688	Haplochromis_burtoni
ENSTNIG00000000740	cth1	99	50.794	ENSHCOG00000010276	cth1	99	50.789	Hippocampus_comes
ENSTNIG00000000740	cth1	97	53.943	ENSIPUG00000018040	cth1	95	53.651	Ictalurus_punctatus
ENSTNIG00000000740	cth1	100	57.846	ENSKMAG00000005944	cth1	100	58.462	Kryptolebias_marmoratus
ENSTNIG00000000740	cth1	100	67.913	ENSLBEG00000019253	cth1	100	67.913	Labrus_bergylta
ENSTNIG00000000740	cth1	74	46.729	ENSLOCG00000002047	cth1	98	47.196	Lepisosteus_oculatus
ENSTNIG00000000740	cth1	99	49.206	ENSMAMG00000001525	cth1	60	61.883	Mastacembelus_armatus
ENSTNIG00000000740	cth1	99	59.748	ENSMZEG00005022335	cth1	99	60.692	Maylandia_zebra
ENSTNIG00000000740	cth1	94	67.219	ENSMMOG00000020518	cth1	100	67.219	Mola_mola
ENSTNIG00000000740	cth1	100	52.632	ENSMALG00000020738	cth1	58	65.333	Monopterus_albus
ENSTNIG00000000740	cth1	100	54.890	ENSNBRG00000022789	cth1	96	57.097	Neolamprologus_brichardi
ENSTNIG00000000740	cth1	99	60.312	ENSONIG00000021318	cth1	99	60.185	Oreochromis_niloticus
ENSTNIG00000000740	cth1	100	55.280	ENSORLG00000022847	cth1	100	56.832	Oryzias_latipes
ENSTNIG00000000740	cth1	100	54.658	ENSORLG00020011979	cth1	100	55.901	Oryzias_latipes_hni
ENSTNIG00000000740	cth1	100	54.688	ENSORLG00015013084	cth1	100	56.563	Oryzias_latipes_hsok
ENSTNIG00000000740	cth1	100	54.717	ENSOMEG00000005809	cth1	85	56.563	Oryzias_melastigma
ENSTNIG00000000740	cth1	96	46.440	ENSPKIG00000015883	cth1	95	45.706	Paramormyrops_kingsleyae
ENSTNIG00000000740	cth1	99	61.111	ENSPMGG00000004275	cth1	100	61.515	Periophthalmus_magnuspinnatus
ENSTNIG00000000740	cth1	100	57.994	ENSPFOG00000013583	cth1	94	57.994	Poecilia_formosa
ENSTNIG00000000740	cth1	100	57.994	ENSPLAG00000018158	cth1	94	57.994	Poecilia_latipinna
ENSTNIG00000000740	cth1	100	57.680	ENSPMEG00000005744	cth1	100	57.680	Poecilia_mexicana
ENSTNIG00000000740	cth1	99	58.861	ENSPREG00000004099	cth1	99	59.683	Poecilia_reticulata
ENSTNIG00000000740	cth1	88	59.431	ENSPNYG00000016705	cth1	92	58.947	Pundamilia_nyererei
ENSTNIG00000000740	cth1	97	51.964	ENSPNAG00000013147	cth1	95	53.750	Pygocentrus_nattereri
ENSTNIG00000000740	cth1	91	51.780	ENSSFOG00015017190	cth1	94	51.148	Scleropages_formosus
ENSTNIG00000000740	cth1	99	63.863	ENSSMAG00000007977	cth1	99	65.839	Scophthalmus_maximus
ENSTNIG00000000740	cth1	99	67.477	ENSSDUG00000004321	cth1	99	67.781	Seriola_dumerili
ENSTNIG00000000740	cth1	99	67.273	ENSSLDG00000010023	-	100	67.576	Seriola_lalandi_dorsalis
ENSTNIG00000000740	cth1	99	67.273	ENSSLDG00000012760	cth1	99	67.576	Seriola_lalandi_dorsalis
ENSTNIG00000000740	cth1	99	67.273	ENSSLDG00000004516	-	99	67.576	Seriola_lalandi_dorsalis
ENSTNIG00000000740	cth1	100	63.438	ENSSPAG00000018659	cth1	100	64.396	Stegastes_partitus
ENSTNIG00000000740	cth1	100	85.804	ENSTRUG00000012770	cth1	100	85.804	Takifugu_rubripes
ENSTNIG00000000740	cth1	83	54.545	ENSXCOG00000003710	cth1	82	51.807	Xiphophorus_couchianus
ENSTNIG00000000740	cth1	100	58.491	ENSXMAG00000023885	cth1	100	58.491	Xiphophorus_maculatus