EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000000741 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-107m4.1
Alias: -
Full Name: si:ch211-107m4.1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3067 bases
Position: chr1:8367719-8370785
Accession: ZDB-GENE-081107-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000001014	SAP	PF02037.27	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000001526	-	1728	-	ENSTNIP00000001014	576 (aa)	-	H3BYE8

Gene Model

Click here to download ENSTNIG00000000741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000000741's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000000741	si:ch211-107m4.1	99	30.875	ENSTNIG00000009725	hnrnpub	74	31.017

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000000741	si:ch211-107m4.1	100	57.432	ENSAPOG00000005128	si:ch211-107m4.1	91	56.514	Acanthochromis_polyacanthus
ENSTNIG00000000741	si:ch211-107m4.1	100	58.191	ENSACIG00000022729	si:ch211-107m4.1	82	58.803	Amphilophus_citrinellus
ENSTNIG00000000741	si:ch211-107m4.1	99	55.912	ENSAOCG00000017297	si:ch211-107m4.1	87	56.122	Amphiprion_ocellaris
ENSTNIG00000000741	si:ch211-107m4.1	99	55.272	ENSAPEG00000009122	-	87	55.272	Amphiprion_percula
ENSTNIG00000000741	si:ch211-107m4.1	75	41.818	ENSACAG00000000746	-	76	35.692	Anolis_carolinensis
ENSTNIG00000000741	si:ch211-107m4.1	87	38.123	ENSANAG00000027153	-	85	34.703	Aotus_nancymaae
ENSTNIG00000000741	si:ch211-107m4.1	100	57.823	ENSACLG00000018069	si:ch211-107m4.1	92	57.823	Astatotilapia_calliptera
ENSTNIG00000000741	si:ch211-107m4.1	100	42.578	ENSAMXG00000033712	si:ch211-107m4.1	89	42.610	Astyanax_mexicanus
ENSTNIG00000000741	si:ch211-107m4.1	80	39.958	ENSBTAG00000002510	HNRNPUL2	85	34.650	Bos_taurus
ENSTNIG00000000741	si:ch211-107m4.1	80	39.958	ENSCJAG00000018709	-	85	34.763	Callithrix_jacchus
ENSTNIG00000000741	si:ch211-107m4.1	80	40.167	ENSCAFG00000015686	-	85	34.347	Canis_familiaris
ENSTNIG00000000741	si:ch211-107m4.1	80	40.167	ENSCAFG00020013120	-	85	34.347	Canis_lupus_dingo
ENSTNIG00000000741	si:ch211-107m4.1	80	40.167	ENSCHIG00000020213	-	85	34.802	Capra_hircus
ENSTNIG00000000741	si:ch211-107m4.1	80	37.448	ENSCCAG00000037674	-	85	32.572	Cebus_capucinus
ENSTNIG00000000741	si:ch211-107m4.1	80	40.417	ENSCATG00000034588	-	85	35.023	Cercocebus_atys
ENSTNIG00000000741	si:ch211-107m4.1	80	40.417	ENSCSAG00000006701	-	82	35.123	Chlorocebus_sabaeus
ENSTNIG00000000741	si:ch211-107m4.1	75	42.597	ENSCPBG00000017963	-	83	36.463	Chrysemys_picta_bellii
ENSTNIG00000000741	si:ch211-107m4.1	88	38.095	ENSCGRG00001017076	Hnrnpul2	85	35.039	Cricetulus_griseus_chok1gshd
ENSTNIG00000000741	si:ch211-107m4.1	99	56.155	ENSCSEG00000005686	si:ch211-107m4.1	91	56.155	Cynoglossus_semilaevis
ENSTNIG00000000741	si:ch211-107m4.1	100	55.387	ENSCVAG00000006862	si:ch211-107m4.1	89	54.833	Cyprinodon_variegatus
ENSTNIG00000000741	si:ch211-107m4.1	100	41.527	ENSDARG00000056830	si:ch211-107m4.1	88	40.763	Danio_rerio
ENSTNIG00000000741	si:ch211-107m4.1	87	37.812	ENSDNOG00000006508	-	85	34.609	Dasypus_novemcinctus
ENSTNIG00000000741	si:ch211-107m4.1	88	37.736	ENSDORG00000008678	Hnrnpul2	85	34.456	Dipodomys_ordii
ENSTNIG00000000741	si:ch211-107m4.1	87	38.623	ENSEASG00005011347	-	85	34.656	Equus_asinus_asinus
ENSTNIG00000000741	si:ch211-107m4.1	87	38.432	ENSECAG00000020298	-	85	34.504	Equus_caballus
ENSTNIG00000000741	si:ch211-107m4.1	85	71.429	ENSELUG00000008134	si:ch211-107m4.1	89	43.441	Esox_lucius
ENSTNIG00000000741	si:ch211-107m4.1	87	38.623	ENSFCAG00000014766	-	85	34.498	Felis_catus
ENSTNIG00000000741	si:ch211-107m4.1	100	58.124	ENSFHEG00000014731	si:ch211-107m4.1	91	58.124	Fundulus_heteroclitus
ENSTNIG00000000741	si:ch211-107m4.1	100	56.998	ENSGAFG00000016579	si:ch211-107m4.1	94	52.812	Gambusia_affinis
ENSTNIG00000000741	si:ch211-107m4.1	97	67.939	ENSGACG00000017006	si:ch211-107m4.1	86	67.939	Gasterosteus_aculeatus
ENSTNIG00000000741	si:ch211-107m4.1	87	38.359	ENSGGOG00000011722	HNRNPUL2	85	35.069	Gorilla_gorilla
ENSTNIG00000000741	si:ch211-107m4.1	100	57.407	ENSHBUG00000013076	si:ch211-107m4.1	91	57.407	Haplochromis_burtoni
ENSTNIG00000000741	si:ch211-107m4.1	79	38.235	ENSHGLG00000003285	-	85	33.965	Heterocephalus_glaber_female
ENSTNIG00000000741	si:ch211-107m4.1	99	41.102	ENSIPUG00000009518	si:ch211-107m4.1	87	40.945	Ictalurus_punctatus
ENSTNIG00000000741	si:ch211-107m4.1	80	40.167	ENSSTOG00000004327	-	85	34.816	Ictidomys_tridecemlineatus
ENSTNIG00000000741	si:ch211-107m4.1	88	38.286	ENSJJAG00000011206	Hnrnpul2	85	34.869	Jaculus_jaculus
ENSTNIG00000000741	si:ch211-107m4.1	100	58.194	ENSKMAG00000003651	si:ch211-107m4.1	89	58.194	Kryptolebias_marmoratus
ENSTNIG00000000741	si:ch211-107m4.1	79	39.149	ENSLACG00000009304	-	84	34.526	Latimeria_chalumnae
ENSTNIG00000000741	si:ch211-107m4.1	99	34.681	ENSLAFG00000005377	-	85	34.703	Loxodonta_africana
ENSTNIG00000000741	si:ch211-107m4.1	80	40.417	ENSMFAG00000041014	-	85	35.023	Macaca_fascicularis
ENSTNIG00000000741	si:ch211-107m4.1	80	40.417	ENSMNEG00000036955	-	85	35.023	Macaca_nemestrina
ENSTNIG00000000741	si:ch211-107m4.1	100	59.184	ENSMAMG00000021489	si:ch211-107m4.1	88	58.503	Mastacembelus_armatus
ENSTNIG00000000741	si:ch211-107m4.1	100	57.823	ENSMZEG00005005136	si:ch211-107m4.1	92	57.823	Maylandia_zebra
ENSTNIG00000000741	si:ch211-107m4.1	88	38.095	ENSMAUG00000013163	Hnrnpul2	69	37.547	Mesocricetus_auratus
ENSTNIG00000000741	si:ch211-107m4.1	87	37.620	ENSMICG00000009943	-	85	34.409	Microcebus_murinus
ENSTNIG00000000741	si:ch211-107m4.1	73	38.835	ENSMOCG00000020000	Hnrnpul2	83	38.835	Microtus_ochrogaster
ENSTNIG00000000741	si:ch211-107m4.1	80	70.408	ENSMALG00000011564	si:ch211-107m4.1	82	70.408	Monopterus_albus
ENSTNIG00000000741	si:ch211-107m4.1	88	37.833	MGP_CAROLIEiJ_G0022656	Hnrnpul2	85	34.509	Mus_caroli
ENSTNIG00000000741	si:ch211-107m4.1	88	38.023	ENSMUSG00000071659	Hnrnpul2	69	37.476	Mus_musculus
ENSTNIG00000000741	si:ch211-107m4.1	88	38.023	MGP_PahariEiJ_G0014151	Hnrnpul2	85	34.930	Mus_pahari
ENSTNIG00000000741	si:ch211-107m4.1	88	38.023	MGP_SPRETEiJ_G0023569	Hnrnpul2	85	34.509	Mus_spretus
ENSTNIG00000000741	si:ch211-107m4.1	80	40.167	ENSMPUG00000013707	-	84	34.195	Mustela_putorius_furo
ENSTNIG00000000741	si:ch211-107m4.1	80	41.004	ENSMLUG00000000412	-	85	34.731	Myotis_lucifugus
ENSTNIG00000000741	si:ch211-107m4.1	87	38.314	ENSNGAG00000012005	Hnrnpul2	85	35.267	Nannospalax_galili
ENSTNIG00000000741	si:ch211-107m4.1	100	55.932	ENSNBRG00000000429	si:ch211-107m4.1	85	55.932	Neolamprologus_brichardi
ENSTNIG00000000741	si:ch211-107m4.1	80	40.417	ENSNLEG00000004077	-	69	37.925	Nomascus_leucogenys
ENSTNIG00000000741	si:ch211-107m4.1	100	57.239	ENSONIG00000005422	si:ch211-107m4.1	92	57.239	Oreochromis_niloticus
ENSTNIG00000000741	si:ch211-107m4.1	87	38.697	ENSOCUG00000009474	-	85	34.703	Oryctolagus_cuniculus
ENSTNIG00000000741	si:ch211-107m4.1	100	58.206	ENSORLG00000024574	si:ch211-107m4.1	94	55.122	Oryzias_latipes
ENSTNIG00000000741	si:ch211-107m4.1	100	58.685	ENSOMEG00000018153	si:ch211-107m4.1	89	58.685	Oryzias_melastigma
ENSTNIG00000000741	si:ch211-107m4.1	80	39.375	ENSOGAG00000003302	-	92	33.931	Otolemur_garnettii
ENSTNIG00000000741	si:ch211-107m4.1	80	40.167	ENSOARG00000016817	-	85	34.802	Ovis_aries
ENSTNIG00000000741	si:ch211-107m4.1	87	38.623	ENSPPRG00000006380	-	85	34.498	Panthera_pardus
ENSTNIG00000000741	si:ch211-107m4.1	88	38.330	ENSPTRG00000034359	HNRNPUL2	85	34.703	Pan_troglodytes
ENSTNIG00000000741	si:ch211-107m4.1	80	40.417	ENSPANG00000023745	-	96	35.023	Papio_anubis
ENSTNIG00000000741	si:ch211-107m4.1	88	38.213	ENSPEMG00000015546	Hnrnpul2	85	34.621	Peromyscus_maniculatus_bairdii
ENSTNIG00000000741	si:ch211-107m4.1	99	57.976	ENSPFOG00000008050	si:ch211-107m4.1	99	57.751	Poecilia_formosa
ENSTNIG00000000741	si:ch211-107m4.1	100	57.483	ENSPLAG00000003485	si:ch211-107m4.1	88	57.264	Poecilia_latipinna
ENSTNIG00000000741	si:ch211-107m4.1	100	57.993	ENSPMEG00000005490	si:ch211-107m4.1	88	57.770	Poecilia_mexicana
ENSTNIG00000000741	si:ch211-107m4.1	100	57.191	ENSPREG00000014973	si:ch211-107m4.1	88	58.037	Poecilia_reticulata
ENSTNIG00000000741	si:ch211-107m4.1	87	37.931	ENSPCOG00000013502	-	85	34.399	Propithecus_coquereli
ENSTNIG00000000741	si:ch211-107m4.1	88	38.667	ENSPVAG00000003475	-	85	35.213	Pteropus_vampyrus
ENSTNIG00000000741	si:ch211-107m4.1	87	38.123	ENSRNOG00000019507	Hnrnpul2	85	34.356	Rattus_norvegicus
ENSTNIG00000000741	si:ch211-107m4.1	80	40.417	ENSRBIG00000037820	-	85	34.703	Rhinopithecus_bieti
ENSTNIG00000000741	si:ch211-107m4.1	80	40.417	ENSRROG00000036561	-	85	34.703	Rhinopithecus_roxellana
ENSTNIG00000000741	si:ch211-107m4.1	85	71.429	ENSSFOG00015006544	si:ch211-107m4.1	62	71.429	Scleropages_formosus
ENSTNIG00000000741	si:ch211-107m4.1	100	55.348	ENSSMAG00000017226	si:ch211-107m4.1	91	55.348	Scophthalmus_maximus
ENSTNIG00000000741	si:ch211-107m4.1	100	57.763	ENSSPAG00000006972	si:ch211-107m4.1	89	57.380	Stegastes_partitus
ENSTNIG00000000741	si:ch211-107m4.1	87	38.359	ENSSSCG00000028542	-	84	34.769	Sus_scrofa
ENSTNIG00000000741	si:ch211-107m4.1	100	67.637	ENSTRUG00000012843	si:ch211-107m4.1	89	67.637	Takifugu_rubripes
ENSTNIG00000000741	si:ch211-107m4.1	71	41.111	ENSTTRG00000002475	-	73	41.111	Tursiops_truncatus
ENSTNIG00000000741	si:ch211-107m4.1	80	40.625	ENSUAMG00000025971	-	85	34.802	Ursus_americanus
ENSTNIG00000000741	si:ch211-107m4.1	80	40.167	ENSVVUG00000029847	-	85	34.347	Vulpes_vulpes
ENSTNIG00000000741	si:ch211-107m4.1	85	36.978	ENSXETG00000006015	hnrnpul2	83	34.873	Xenopus_tropicalis
ENSTNIG00000000741	si:ch211-107m4.1	100	57.143	ENSXMAG00000003224	si:ch211-107m4.1	91	56.655	Xiphophorus_maculatus