EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000000911 (Gene tree)
Gene ID: -
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: PRP18 pre-mRNA processing factor 18 homolog (yeast)
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 4696 bases
Position: chr13:4589677-4594372
Accession: ZDB-GENE-040704-45
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000000043	PRP4	PF08799.11	9.6e-13	1	1
ENSTNIP00000000043	Prp18	PF02840.15	2.6e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000001943	-	1470	-	ENSTNIP00000000043	341 (aa)	-	H3BVN1

Gene Model

Click here to download ENSTNIG00000000911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000000911's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000000911	prpf18	100	82.164	ENSG00000165630	PRPF18	100	82.164	Homo_sapiens
ENSTNIG00000000911	prpf18	100	90.909	ENSAPOG00000024177	prpf18	100	90.909	Acanthochromis_polyacanthus
ENSTNIG00000000911	prpf18	100	81.579	ENSAMEG00000013591	-	100	81.579	Ailuropoda_melanoleuca
ENSTNIG00000000911	prpf18	100	90.616	ENSACIG00000001186	prpf18	100	90.616	Amphilophus_citrinellus
ENSTNIG00000000911	prpf18	98	90.419	ENSAOCG00000006572	prpf18	94	88.012	Amphiprion_ocellaris
ENSTNIG00000000911	prpf18	100	90.616	ENSAPEG00000004564	prpf18	100	90.616	Amphiprion_percula
ENSTNIG00000000911	prpf18	100	90.323	ENSATEG00000000303	prpf18	100	90.323	Anabas_testudineus
ENSTNIG00000000911	prpf18	99	83.529	ENSAPLG00000003387	-	99	83.529	Anas_platyrhynchos
ENSTNIG00000000911	prpf18	100	82.267	ENSACAG00000000818	-	100	82.267	Anolis_carolinensis
ENSTNIG00000000911	prpf18	100	81.871	ENSANAG00000037445	-	100	81.871	Aotus_nancymaae
ENSTNIG00000000911	prpf18	100	89.736	ENSACLG00000026296	prpf18	100	89.736	Astatotilapia_calliptera
ENSTNIG00000000911	prpf18	100	85.714	ENSAMXG00000012848	prpf18	100	85.714	Astyanax_mexicanus
ENSTNIG00000000911	prpf18	100	81.287	ENSBTAG00000017244	PRPF18	100	81.287	Bos_taurus
ENSTNIG00000000911	prpf18	98	39.368	WBGene00009320	F32B6.3	97	39.368	Caenorhabditis_elegans
ENSTNIG00000000911	prpf18	100	81.871	ENSCJAG00000009432	-	100	81.871	Callithrix_jacchus
ENSTNIG00000000911	prpf18	100	81.579	ENSCAFG00000004735	-	100	81.579	Canis_familiaris
ENSTNIG00000000911	prpf18	100	81.579	ENSCAFG00020007712	-	100	81.579	Canis_lupus_dingo
ENSTNIG00000000911	prpf18	100	81.287	ENSCHIG00000000499	-	100	81.287	Capra_hircus
ENSTNIG00000000911	prpf18	100	82.164	ENSTSYG00000003517	-	100	82.164	Carlito_syrichta
ENSTNIG00000000911	prpf18	100	82.164	ENSCPOG00000021069	-	100	82.164	Cavia_porcellus
ENSTNIG00000000911	prpf18	100	81.871	ENSCCAG00000036822	-	100	81.871	Cebus_capucinus
ENSTNIG00000000911	prpf18	100	71.637	ENSCATG00000016633	-	100	71.637	Cercocebus_atys
ENSTNIG00000000911	prpf18	100	81.871	ENSCLAG00000011770	-	100	81.871	Chinchilla_lanigera
ENSTNIG00000000911	prpf18	100	80.057	ENSCSAG00000013109	-	100	80.057	Chlorocebus_sabaeus
ENSTNIG00000000911	prpf18	100	79.775	ENSCPBG00000003100	-	100	80.618	Chrysemys_picta_bellii
ENSTNIG00000000911	prpf18	99	56.471	ENSCING00000020481	-	97	56.471	Ciona_intestinalis
ENSTNIG00000000911	prpf18	99	55.718	ENSCSAVG00000010546	-	99	54.734	Ciona_savignyi
ENSTNIG00000000911	prpf18	100	82.164	ENSCANG00000034900	-	100	82.164	Colobus_angolensis_palliatus
ENSTNIG00000000911	prpf18	100	81.871	ENSCGRG00001023665	Prpf18	100	81.871	Cricetulus_griseus_chok1gshd
ENSTNIG00000000911	prpf18	100	81.871	ENSCGRG00000014690	Prpf18	100	81.871	Cricetulus_griseus_crigri
ENSTNIG00000000911	prpf18	100	87.977	ENSCSEG00000005536	prpf18	99	87.977	Cynoglossus_semilaevis
ENSTNIG00000000911	prpf18	100	88.856	ENSCVAG00000012401	prpf18	100	88.856	Cyprinodon_variegatus
ENSTNIG00000000911	prpf18	100	87.719	ENSDARG00000058306	prpf18	100	87.719	Danio_rerio
ENSTNIG00000000911	prpf18	100	81.871	ENSDNOG00000035607	-	100	81.871	Dasypus_novemcinctus
ENSTNIG00000000911	prpf18	100	81.871	ENSDORG00000000858	Prpf18	100	81.871	Dipodomys_ordii
ENSTNIG00000000911	prpf18	99	51.183	FBgn0027784	Prp18	98	51.183	Drosophila_melanogaster
ENSTNIG00000000911	prpf18	100	74.269	ENSETEG00000015060	-	100	74.269	Echinops_telfairi
ENSTNIG00000000911	prpf18	100	68.876	ENSEBUG00000016502	prpf18	99	68.012	Eptatretus_burgeri
ENSTNIG00000000911	prpf18	100	81.871	ENSEASG00005019373	-	100	81.871	Equus_asinus_asinus
ENSTNIG00000000911	prpf18	100	81.871	ENSECAG00000006997	PRPF18	100	81.871	Equus_caballus
ENSTNIG00000000911	prpf18	92	49.684	ENSEEUG00000001171	-	79	100.000	Erinaceus_europaeus
ENSTNIG00000000911	prpf18	100	86.880	ENSELUG00000022190	prpf18	100	86.880	Esox_lucius
ENSTNIG00000000911	prpf18	100	81.871	ENSFCAG00000004436	-	100	81.871	Felis_catus
ENSTNIG00000000911	prpf18	92	80.308	ENSFALG00000001912	-	97	80.923	Ficedula_albicollis
ENSTNIG00000000911	prpf18	99	57.101	ENSFDAG00000010713	-	97	57.101	Fukomys_damarensis
ENSTNIG00000000911	prpf18	94	84.062	ENSFDAG00000014026	-	100	84.062	Fukomys_damarensis
ENSTNIG00000000911	prpf18	80	90.476	ENSFHEG00000020125	prpf18	98	90.262	Fundulus_heteroclitus
ENSTNIG00000000911	prpf18	99	84.412	ENSGMOG00000012210	prpf18	99	84.412	Gadus_morhua
ENSTNIG00000000911	prpf18	100	84.503	ENSGALG00000043593	-	100	84.503	Gallus_gallus
ENSTNIG00000000911	prpf18	100	90.029	ENSGAFG00000006034	prpf18	100	90.029	Gambusia_affinis
ENSTNIG00000000911	prpf18	100	86.804	ENSGACG00000012232	prpf18	100	86.804	Gasterosteus_aculeatus
ENSTNIG00000000911	prpf18	100	83.918	ENSGAGG00000016878	-	100	83.918	Gopherus_agassizii
ENSTNIG00000000911	prpf18	92	81.013	ENSGGOG00000025188	-	96	81.013	Gorilla_gorilla
ENSTNIG00000000911	prpf18	100	89.736	ENSHBUG00000010264	prpf18	100	89.736	Haplochromis_burtoni
ENSTNIG00000000911	prpf18	100	82.164	ENSHGLG00000018534	PRPF18	100	82.164	Heterocephalus_glaber_female
ENSTNIG00000000911	prpf18	94	84.375	ENSHGLG00100012161	-	98	84.375	Heterocephalus_glaber_male
ENSTNIG00000000911	prpf18	100	90.909	ENSHCOG00000015987	prpf18	100	90.909	Hippocampus_comes
ENSTNIG00000000911	prpf18	100	81.020	ENSIPUG00000007432	prpf18	100	81.870	Ictalurus_punctatus
ENSTNIG00000000911	prpf18	100	81.871	ENSSTOG00000008735	-	100	81.871	Ictidomys_tridecemlineatus
ENSTNIG00000000911	prpf18	100	61.516	ENSJJAG00000015191	-	100	61.516	Jaculus_jaculus
ENSTNIG00000000911	prpf18	100	82.164	ENSJJAG00000024041	-	100	82.164	Jaculus_jaculus
ENSTNIG00000000911	prpf18	100	90.029	ENSKMAG00000012124	prpf18	100	90.029	Kryptolebias_marmoratus
ENSTNIG00000000911	prpf18	100	85.337	ENSLBEG00000028466	prpf18	100	85.337	Labrus_bergylta
ENSTNIG00000000911	prpf18	100	83.918	ENSLACG00000009885	prpf18	100	84.795	Latimeria_chalumnae
ENSTNIG00000000911	prpf18	100	87.427	ENSLOCG00000016736	prpf18	100	87.427	Lepisosteus_oculatus
ENSTNIG00000000911	prpf18	100	82.164	ENSLAFG00000007753	-	100	82.164	Loxodonta_africana
ENSTNIG00000000911	prpf18	100	82.164	ENSMFAG00000000540	-	100	82.164	Macaca_fascicularis
ENSTNIG00000000911	prpf18	100	82.164	ENSMMUG00000015071	PRPF18	93	91.391	Macaca_mulatta
ENSTNIG00000000911	prpf18	100	82.164	ENSMNEG00000024679	-	100	82.164	Macaca_nemestrina
ENSTNIG00000000911	prpf18	100	66.959	ENSMLEG00000031715	-	100	66.959	Mandrillus_leucophaeus
ENSTNIG00000000911	prpf18	100	91.496	ENSMAMG00000006610	prpf18	100	91.496	Mastacembelus_armatus
ENSTNIG00000000911	prpf18	100	89.736	ENSMZEG00005019392	prpf18	100	89.736	Maylandia_zebra
ENSTNIG00000000911	prpf18	100	84.503	ENSMGAG00000005023	-	100	84.503	Meleagris_gallopavo
ENSTNIG00000000911	prpf18	100	82.456	ENSMICG00000006572	-	100	82.456	Microcebus_murinus
ENSTNIG00000000911	prpf18	100	82.164	ENSMOCG00000021468	Prpf18	100	82.164	Microtus_ochrogaster
ENSTNIG00000000911	prpf18	100	92.375	ENSMMOG00000013012	prpf18	100	92.375	Mola_mola
ENSTNIG00000000911	prpf18	100	75.439	ENSMODG00000024043	-	100	75.439	Monodelphis_domestica
ENSTNIG00000000911	prpf18	96	76.923	ENSMODG00000016902	-	92	76.923	Monodelphis_domestica
ENSTNIG00000000911	prpf18	100	82.558	ENSMALG00000005486	prpf18	100	82.558	Monopterus_albus
ENSTNIG00000000911	prpf18	100	81.579	MGP_CAROLIEiJ_G0023143	Prpf18	100	93.151	Mus_caroli
ENSTNIG00000000911	prpf18	100	81.871	ENSMUSG00000039449	Prpf18	100	93.151	Mus_musculus
ENSTNIG00000000911	prpf18	100	81.871	MGP_PahariEiJ_G0019203	Prpf18	100	93.151	Mus_pahari
ENSTNIG00000000911	prpf18	100	81.871	MGP_SPRETEiJ_G0024061	Prpf18	100	93.151	Mus_spretus
ENSTNIG00000000911	prpf18	100	81.871	ENSMPUG00000000938	-	100	81.871	Mustela_putorius_furo
ENSTNIG00000000911	prpf18	100	81.287	ENSMLUG00000009200	-	100	81.287	Myotis_lucifugus
ENSTNIG00000000911	prpf18	100	82.164	ENSNGAG00000012500	-	100	82.164	Nannospalax_galili
ENSTNIG00000000911	prpf18	67	80.870	ENSNGAG00000023550	-	82	80.870	Nannospalax_galili
ENSTNIG00000000911	prpf18	100	89.736	ENSNBRG00000001778	prpf18	100	89.736	Neolamprologus_brichardi
ENSTNIG00000000911	prpf18	100	82.164	ENSNLEG00000012186	-	100	82.164	Nomascus_leucogenys
ENSTNIG00000000911	prpf18	76	71.815	ENSMEUG00000005032	-	75	71.815	Notamacropus_eugenii
ENSTNIG00000000911	prpf18	77	62.264	ENSOPRG00000002153	-	100	62.264	Ochotona_princeps
ENSTNIG00000000911	prpf18	100	81.871	ENSODEG00000003770	-	100	81.871	Octodon_degus
ENSTNIG00000000911	prpf18	98	89.222	ENSONIG00000014854	prpf18	96	89.222	Oreochromis_niloticus
ENSTNIG00000000911	prpf18	100	83.333	ENSOANG00000015404	-	100	83.333	Ornithorhynchus_anatinus
ENSTNIG00000000911	prpf18	100	81.871	ENSOCUG00000027756	-	97	82.477	Oryctolagus_cuniculus
ENSTNIG00000000911	prpf18	100	87.429	ENSORLG00000010293	prpf18	100	87.429	Oryzias_latipes
ENSTNIG00000000911	prpf18	100	89.736	ENSORLG00020001530	prpf18	100	89.736	Oryzias_latipes_hni
ENSTNIG00000000911	prpf18	100	89.443	ENSORLG00015013705	prpf18	100	89.443	Oryzias_latipes_hsok
ENSTNIG00000000911	prpf18	100	91.496	ENSOMEG00000009167	prpf18	100	91.496	Oryzias_melastigma
ENSTNIG00000000911	prpf18	100	81.287	ENSOGAG00000007294	-	100	81.287	Otolemur_garnettii
ENSTNIG00000000911	prpf18	99	80.294	ENSOARG00000006243	-	99	80.294	Ovis_aries
ENSTNIG00000000911	prpf18	100	82.164	ENSPPAG00000041959	-	100	82.164	Pan_paniscus
ENSTNIG00000000911	prpf18	100	81.871	ENSPPRG00000000107	-	100	81.871	Panthera_pardus
ENSTNIG00000000911	prpf18	100	82.164	ENSPTIG00000021094	-	100	82.164	Panthera_tigris_altaica
ENSTNIG00000000911	prpf18	100	82.164	ENSPTRG00000002306	PRPF18	100	82.164	Pan_troglodytes
ENSTNIG00000000911	prpf18	100	82.456	ENSPANG00000023346	-	100	82.456	Papio_anubis
ENSTNIG00000000911	prpf18	100	84.330	ENSPKIG00000014128	prpf18	96	84.330	Paramormyrops_kingsleyae
ENSTNIG00000000911	prpf18	100	83.918	ENSPSIG00000016064	-	100	83.918	Pelodiscus_sinensis
ENSTNIG00000000911	prpf18	100	82.749	ENSPMGG00000016486	prpf18	100	82.749	Periophthalmus_magnuspinnatus
ENSTNIG00000000911	prpf18	100	81.871	ENSPEMG00000013704	Prpf18	100	81.871	Peromyscus_maniculatus_bairdii
ENSTNIG00000000911	prpf18	100	73.199	ENSPMAG00000000204	prpf18	100	73.199	Petromyzon_marinus
ENSTNIG00000000911	prpf18	92	81.646	ENSPCIG00000012963	-	99	81.646	Phascolarctos_cinereus
ENSTNIG00000000911	prpf18	100	86.857	ENSPFOG00000017611	prpf18	100	86.857	Poecilia_formosa
ENSTNIG00000000911	prpf18	100	89.150	ENSPLAG00000000369	prpf18	100	89.150	Poecilia_latipinna
ENSTNIG00000000911	prpf18	100	89.150	ENSPMEG00000005183	prpf18	100	89.150	Poecilia_mexicana
ENSTNIG00000000911	prpf18	100	90.029	ENSPREG00000015232	prpf18	100	90.029	Poecilia_reticulata
ENSTNIG00000000911	prpf18	100	81.871	ENSPPYG00000002101	PRPF18	100	81.871	Pongo_abelii
ENSTNIG00000000911	prpf18	100	64.327	ENSPCAG00000010833	-	100	64.327	Procavia_capensis
ENSTNIG00000000911	prpf18	100	79.179	ENSPCOG00000013057	-	100	79.179	Propithecus_coquereli
ENSTNIG00000000911	prpf18	100	50.585	ENSPVAG00000002947	-	100	50.585	Pteropus_vampyrus
ENSTNIG00000000911	prpf18	100	89.443	ENSPNYG00000003554	prpf18	100	89.443	Pundamilia_nyererei
ENSTNIG00000000911	prpf18	100	85.755	ENSPNAG00000023151	prpf18	100	85.755	Pygocentrus_nattereri
ENSTNIG00000000911	prpf18	100	81.871	ENSRNOG00000018396	Prpf18	100	81.871	Rattus_norvegicus
ENSTNIG00000000911	prpf18	100	82.456	ENSRBIG00000028028	-	100	82.456	Rhinopithecus_bieti
ENSTNIG00000000911	prpf18	100	82.164	ENSRROG00000040695	-	100	82.164	Rhinopithecus_roxellana
ENSTNIG00000000911	prpf18	100	81.871	ENSSBOG00000034482	-	100	81.871	Saimiri_boliviensis_boliviensis
ENSTNIG00000000911	prpf18	100	68.713	ENSSHAG00000009669	-	100	68.713	Sarcophilus_harrisii
ENSTNIG00000000911	prpf18	100	82.749	ENSSHAG00000016463	-	100	82.749	Sarcophilus_harrisii
ENSTNIG00000000911	prpf18	77	46.591	ENSSFOG00015021154	-	89	50.215	Scleropages_formosus
ENSTNIG00000000911	prpf18	98	84.058	ENSSFOG00015022118	prpf18	100	80.403	Scleropages_formosus
ENSTNIG00000000911	prpf18	100	88.856	ENSSMAG00000005308	prpf18	100	88.856	Scophthalmus_maximus
ENSTNIG00000000911	prpf18	100	91.202	ENSSDUG00000015428	prpf18	100	91.202	Seriola_dumerili
ENSTNIG00000000911	prpf18	100	90.909	ENSSLDG00000023989	prpf18	100	90.909	Seriola_lalandi_dorsalis
ENSTNIG00000000911	prpf18	100	54.094	ENSSARG00000005307	-	100	54.094	Sorex_araneus
ENSTNIG00000000911	prpf18	100	83.626	ENSSPUG00000002619	-	100	83.626	Sphenodon_punctatus
ENSTNIG00000000911	prpf18	100	90.909	ENSSPAG00000019502	prpf18	100	90.909	Stegastes_partitus
ENSTNIG00000000911	prpf18	100	81.579	ENSSSCG00000026354	-	100	81.579	Sus_scrofa
ENSTNIG00000000911	prpf18	100	84.503	ENSTGUG00000002286	-	100	84.503	Taeniopygia_guttata
ENSTNIG00000000911	prpf18	100	94.428	ENSTRUG00000011278	prpf18	100	94.428	Takifugu_rubripes
ENSTNIG00000000911	prpf18	79	98.718	ENSTBEG00000013011	-	79	98.718	Tupaia_belangeri
ENSTNIG00000000911	prpf18	100	82.456	ENSTTRG00000011117	PRPF18	100	82.456	Tursiops_truncatus
ENSTNIG00000000911	prpf18	91	84.887	ENSUAMG00000001815	-	93	84.887	Ursus_americanus
ENSTNIG00000000911	prpf18	100	76.901	ENSUMAG00000012329	-	100	76.901	Ursus_maritimus
ENSTNIG00000000911	prpf18	100	76.023	ENSVPAG00000011486	-	100	76.023	Vicugna_pacos
ENSTNIG00000000911	prpf18	100	81.579	ENSVVUG00000005453	-	100	81.579	Vulpes_vulpes
ENSTNIG00000000911	prpf18	100	75.072	ENSXETG00000024057	prpf18	100	75.362	Xenopus_tropicalis
ENSTNIG00000000911	prpf18	100	89.213	ENSXCOG00000020414	prpf18	100	89.213	Xiphophorus_couchianus
ENSTNIG00000000911	prpf18	100	90.029	ENSXMAG00000004713	prpf18	91	90.029	Xiphophorus_maculatus