EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000000915 (Gene tree)
Gene ID: -
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B (autoantigen La)
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2721 bases
Position: chr2:13915370-13918090
Accession: ZDB-GENE-030131-223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000003619	RRM_1	PF00076.22	5.4e-12	1	1
ENSTNIP00000003619	RRM_3	PF08777.11	7.6e-31	1	1
ENSTNIP00000003619	La	PF05383.17	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000003797	-	1068	-	ENSTNIP00000003619	356 (aa)	-	H3C5U9

Gene Model

Click here to download ENSTNIG00000000915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000000915's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000000915	ssb	100	59.239	ENSG00000138385	SSB	98	65.254	Homo_sapiens
ENSTNIG00000000915	ssb	100	80.109	ENSAPOG00000003448	ssb	95	81.199	Acanthochromis_polyacanthus
ENSTNIG00000000915	ssb	100	57.330	ENSAMEG00000010507	SSB	90	57.330	Ailuropoda_melanoleuca
ENSTNIG00000000915	ssb	100	77.008	ENSACIG00000001738	ssb	95	78.237	Amphilophus_citrinellus
ENSTNIG00000000915	ssb	91	87.963	ENSAOCG00000020398	ssb	95	81.199	Amphiprion_ocellaris
ENSTNIG00000000915	ssb	100	79.837	ENSAPEG00000020395	ssb	95	81.199	Amphiprion_percula
ENSTNIG00000000915	ssb	100	77.112	ENSATEG00000016884	ssb	92	78.747	Anabas_testudineus
ENSTNIG00000000915	ssb	93	62.275	ENSAPLG00000006109	SSB	78	62.275	Anas_platyrhynchos
ENSTNIG00000000915	ssb	99	58.356	ENSACAG00000017008	SSB	89	58.311	Anolis_carolinensis
ENSTNIG00000000915	ssb	100	54.039	ENSANAG00000027195	-	90	54.039	Aotus_nancymaae
ENSTNIG00000000915	ssb	100	73.684	ENSACLG00000010798	ssb	97	71.351	Astatotilapia_calliptera
ENSTNIG00000000915	ssb	91	64.506	ENSAMXG00000012606	ssb	90	60.976	Astyanax_mexicanus
ENSTNIG00000000915	ssb	100	59.511	ENSBTAG00000008716	SSB	91	59.511	Bos_taurus
ENSTNIG00000000915	ssb	83	35.314	WBGene00016653	C44E4.4	81	34.663	Caenorhabditis_elegans
ENSTNIG00000000915	ssb	100	60.054	ENSCJAG00000045073	SSB	85	69.565	Callithrix_jacchus
ENSTNIG00000000915	ssb	100	59.783	ENSCAFG00000012418	SSB	90	59.783	Canis_familiaris
ENSTNIG00000000915	ssb	100	59.783	ENSCAFG00020002900	SSB	90	59.783	Canis_lupus_dingo
ENSTNIG00000000915	ssb	94	58.501	ENSCHIG00000022196	-	87	58.501	Capra_hircus
ENSTNIG00000000915	ssb	100	59.511	ENSCHIG00000022624	-	90	59.511	Capra_hircus
ENSTNIG00000000915	ssb	100	59.511	ENSTSYG00000000097	SSB	90	59.783	Carlito_syrichta
ENSTNIG00000000915	ssb	100	60.054	ENSCPOG00000003338	SSB	92	58.967	Cavia_porcellus
ENSTNIG00000000915	ssb	100	59.239	ENSCCAG00000035147	SSB	86	69.565	Cebus_capucinus
ENSTNIG00000000915	ssb	68	54.545	ENSCATG00000036701	SSB	73	54.545	Cercocebus_atys
ENSTNIG00000000915	ssb	99	43.288	ENSCATG00000042909	-	87	43.288	Cercocebus_atys
ENSTNIG00000000915	ssb	100	59.511	ENSCLAG00000015617	-	90	59.511	Chinchilla_lanigera
ENSTNIG00000000915	ssb	100	59.239	ENSCSAG00000015200	SSB	80	59.239	Chlorocebus_sabaeus
ENSTNIG00000000915	ssb	99	54.865	ENSCSAG00000018390	-	92	54.865	Chlorocebus_sabaeus
ENSTNIG00000000915	ssb	100	59.239	ENSCHOG00000007763	SSB	90	59.239	Choloepus_hoffmanni
ENSTNIG00000000915	ssb	99	59.786	ENSCPBG00000006519	SSB	89	61.413	Chrysemys_picta_bellii
ENSTNIG00000000915	ssb	99	46.175	ENSCANG00000028838	-	85	46.175	Colobus_angolensis_palliatus
ENSTNIG00000000915	ssb	99	52.432	ENSCANG00000033240	-	89	52.432	Colobus_angolensis_palliatus
ENSTNIG00000000915	ssb	100	59.511	ENSCANG00000027695	SSB	90	59.511	Colobus_angolensis_palliatus
ENSTNIG00000000915	ssb	91	58.663	ENSCGRG00001024831	Ssb	91	54.813	Cricetulus_griseus_chok1gshd
ENSTNIG00000000915	ssb	91	58.663	ENSCGRG00000005387	Ssb	91	54.813	Cricetulus_griseus_crigri
ENSTNIG00000000915	ssb	90	84.783	ENSCSEG00000011599	ssb	91	78.747	Cynoglossus_semilaevis
ENSTNIG00000000915	ssb	100	75.815	ENSCVAG00000021558	ssb	92	77.297	Cyprinodon_variegatus
ENSTNIG00000000915	ssb	100	61.475	ENSDARG00000029252	ssb	91	62.398	Danio_rerio
ENSTNIG00000000915	ssb	100	59.783	ENSDNOG00000013450	SSB	90	59.783	Dasypus_novemcinctus
ENSTNIG00000000915	ssb	100	54.545	ENSDORG00000005543	Ssb	92	55.615	Dipodomys_ordii
ENSTNIG00000000915	ssb	89	37.048	FBgn0011638	La	81	37.048	Drosophila_melanogaster
ENSTNIG00000000915	ssb	57	63.366	ENSETEG00000004614	-	52	63.366	Echinops_telfairi
ENSTNIG00000000915	ssb	99	45.179	ENSEBUG00000001237	ssb	93	45.730	Eptatretus_burgeri
ENSTNIG00000000915	ssb	100	59.783	ENSEASG00005022835	SSB	90	59.783	Equus_asinus_asinus
ENSTNIG00000000915	ssb	100	59.783	ENSECAG00000018495	SSB	90	59.783	Equus_caballus
ENSTNIG00000000915	ssb	86	50.325	ENSEEUG00000008077	SSB	78	50.325	Erinaceus_europaeus
ENSTNIG00000000915	ssb	94	72.917	ENSELUG00000020929	ssb	91	68.219	Esox_lucius
ENSTNIG00000000915	ssb	100	59.783	ENSFCAG00000011601	SSB	90	59.783	Felis_catus
ENSTNIG00000000915	ssb	99	59.726	ENSFALG00000000930	SSB	90	60.274	Ficedula_albicollis
ENSTNIG00000000915	ssb	100	59.783	ENSFDAG00000000598	SSB	90	59.783	Fukomys_damarensis
ENSTNIG00000000915	ssb	80	70.764	ENSFHEG00000003268	ssb	93	72.277	Fundulus_heteroclitus
ENSTNIG00000000915	ssb	98	70.380	ENSGMOG00000002664	ssb	91	70.380	Gadus_morhua
ENSTNIG00000000915	ssb	100	60.165	ENSGALG00000009677	SSB	90	60.165	Gallus_gallus
ENSTNIG00000000915	ssb	100	74.659	ENSGAFG00000002749	ssb	91	75.881	Gambusia_affinis
ENSTNIG00000000915	ssb	100	73.995	ENSGACG00000005107	ssb	92	74.263	Gasterosteus_aculeatus
ENSTNIG00000000915	ssb	99	59.249	ENSGAGG00000007807	SSB	89	60.870	Gopherus_agassizii
ENSTNIG00000000915	ssb	99	51.093	ENSGGOG00000024891	-	89	51.093	Gorilla_gorilla
ENSTNIG00000000915	ssb	100	73.130	ENSHBUG00000006584	ssb	92	74.380	Haplochromis_burtoni
ENSTNIG00000000915	ssb	100	58.400	ENSHGLG00000017580	-	91	58.400	Heterocephalus_glaber_female
ENSTNIG00000000915	ssb	100	53.533	ENSHGLG00000005832	-	93	53.533	Heterocephalus_glaber_female
ENSTNIG00000000915	ssb	100	53.804	ENSHGLG00000004478	-	90	53.804	Heterocephalus_glaber_female
ENSTNIG00000000915	ssb	100	52.861	ENSHGLG00100008767	-	91	52.861	Heterocephalus_glaber_male
ENSTNIG00000000915	ssb	100	58.400	ENSHGLG00100003084	-	91	58.400	Heterocephalus_glaber_male
ENSTNIG00000000915	ssb	99	72.253	ENSHCOG00000019011	ssb	91	74.238	Hippocampus_comes
ENSTNIG00000000915	ssb	100	60.929	ENSIPUG00000003681	SSB	89	61.853	Ictalurus_punctatus
ENSTNIG00000000915	ssb	100	59.673	ENSSTOG00000008416	SSB	90	59.673	Ictidomys_tridecemlineatus
ENSTNIG00000000915	ssb	100	52.850	ENSJJAG00000023158	-	92	52.850	Jaculus_jaculus
ENSTNIG00000000915	ssb	88	46.749	ENSJJAG00000016250	-	85	46.749	Jaculus_jaculus
ENSTNIG00000000915	ssb	100	76.022	ENSKMAG00000017317	ssb	92	77.507	Kryptolebias_marmoratus
ENSTNIG00000000915	ssb	100	76.839	ENSLBEG00000017345	ssb	93	78.591	Labrus_bergylta
ENSTNIG00000000915	ssb	91	58.410	ENSLACG00000014056	SSB	89	55.707	Latimeria_chalumnae
ENSTNIG00000000915	ssb	90	68.944	ENSLOCG00000007933	ssb	90	64.208	Lepisosteus_oculatus
ENSTNIG00000000915	ssb	100	55.325	ENSLAFG00000000867	-	91	55.729	Loxodonta_africana
ENSTNIG00000000915	ssb	100	51.247	ENSLAFG00000028909	-	90	51.247	Loxodonta_africana
ENSTNIG00000000915	ssb	84	43.624	ENSLAFG00000026721	-	98	43.624	Loxodonta_africana
ENSTNIG00000000915	ssb	100	59.511	ENSMFAG00000039066	SSB	85	69.565	Macaca_fascicularis
ENSTNIG00000000915	ssb	94	53.314	ENSMFAG00000041478	-	96	53.314	Macaca_fascicularis
ENSTNIG00000000915	ssb	94	54.310	ENSMMUG00000011724	-	83	54.310	Macaca_mulatta
ENSTNIG00000000915	ssb	99	42.466	ENSMMUG00000039889	-	87	42.466	Macaca_mulatta
ENSTNIG00000000915	ssb	100	59.511	ENSMMUG00000023051	SSB	85	69.565	Macaca_mulatta
ENSTNIG00000000915	ssb	94	53.314	ENSMNEG00000034698	-	96	53.314	Macaca_nemestrina
ENSTNIG00000000915	ssb	100	50.409	ENSMNEG00000028321	SSB	85	69.565	Macaca_nemestrina
ENSTNIG00000000915	ssb	100	59.511	ENSMLEG00000035717	SSB	88	69.565	Mandrillus_leucophaeus
ENSTNIG00000000915	ssb	94	42.939	ENSMLEG00000042644	-	85	42.939	Mandrillus_leucophaeus
ENSTNIG00000000915	ssb	91	86.111	ENSMAMG00000004800	ssb	92	79.946	Mastacembelus_armatus
ENSTNIG00000000915	ssb	100	73.684	ENSMZEG00005005749	ssb	97	71.351	Maylandia_zebra
ENSTNIG00000000915	ssb	99	60.497	ENSMGAG00000010328	SSB	100	65.217	Meleagris_gallopavo
ENSTNIG00000000915	ssb	99	55.858	ENSMICG00000033304	-	93	55.738	Microcebus_murinus
ENSTNIG00000000915	ssb	100	59.511	ENSMICG00000028252	-	90	59.783	Microcebus_murinus
ENSTNIG00000000915	ssb	100	45.600	ENSMODG00000007027	-	89	46.739	Monodelphis_domestica
ENSTNIG00000000915	ssb	84	62.353	ENSMODG00000019271	-	89	62.353	Monodelphis_domestica
ENSTNIG00000000915	ssb	100	54.545	ENSMODG00000008227	-	91	56.085	Monodelphis_domestica
ENSTNIG00000000915	ssb	91	84.877	ENSMALG00000008045	ssb	88	78.804	Monopterus_albus
ENSTNIG00000000915	ssb	91	61.398	MGP_CAROLIEiJ_G0023629	-	98	65.605	Mus_caroli
ENSTNIG00000000915	ssb	91	61.094	ENSMUSG00000068882	Ssb	98	65.605	Mus_musculus
ENSTNIG00000000915	ssb	91	60.790	MGP_PahariEiJ_G0025081	-	98	64.968	Mus_pahari
ENSTNIG00000000915	ssb	91	61.094	MGP_SPRETEiJ_G0024551	Ssb	98	65.605	Mus_spretus
ENSTNIG00000000915	ssb	100	60.054	ENSMPUG00000000785	SSB	90	60.054	Mustela_putorius_furo
ENSTNIG00000000915	ssb	100	57.592	ENSMLUG00000016316	SSB	91	57.592	Myotis_lucifugus
ENSTNIG00000000915	ssb	100	73.130	ENSNBRG00000012661	ssb	97	70.811	Neolamprologus_brichardi
ENSTNIG00000000915	ssb	91	47.706	ENSNLEG00000028754	-	77	47.706	Nomascus_leucogenys
ENSTNIG00000000915	ssb	100	59.239	ENSNLEG00000004958	SSB	86	69.565	Nomascus_leucogenys
ENSTNIG00000000915	ssb	70	62.800	ENSMEUG00000001650	-	100	62.800	Notamacropus_eugenii
ENSTNIG00000000915	ssb	93	58.997	ENSODEG00000004202	-	92	58.997	Octodon_degus
ENSTNIG00000000915	ssb	51	65.217	ENSODEG00000010185	-	99	65.217	Octodon_degus
ENSTNIG00000000915	ssb	100	74.515	ENSONIG00000008776	ssb	92	75.137	Oreochromis_niloticus
ENSTNIG00000000915	ssb	100	56.533	ENSOANG00000008543	SSB	90	58.696	Ornithorhynchus_anatinus
ENSTNIG00000000915	ssb	100	59.239	ENSOCUG00000010396	SSB	90	59.239	Oryctolagus_cuniculus
ENSTNIG00000000915	ssb	91	81.790	ENSORLG00000017208	ssb	92	76.294	Oryzias_latipes
ENSTNIG00000000915	ssb	91	81.481	ENSORLG00020022574	ssb	92	76.022	Oryzias_latipes_hni
ENSTNIG00000000915	ssb	91	81.790	ENSORLG00015016592	ssb	92	76.294	Oryzias_latipes_hsok
ENSTNIG00000000915	ssb	100	77.049	ENSOMEG00000003193	ssb	91	78.261	Oryzias_melastigma
ENSTNIG00000000915	ssb	100	56.364	ENSOGAG00000029768	SSB	91	56.364	Otolemur_garnettii
ENSTNIG00000000915	ssb	100	59.511	ENSOARG00000002906	SSB	90	59.511	Ovis_aries
ENSTNIG00000000915	ssb	100	59.239	ENSPPAG00000042673	SSB	86	69.565	Pan_paniscus
ENSTNIG00000000915	ssb	97	47.550	ENSPPAG00000006189	-	86	47.550	Pan_paniscus
ENSTNIG00000000915	ssb	99	51.639	ENSPPAG00000032427	-	100	62.016	Pan_paniscus
ENSTNIG00000000915	ssb	100	59.783	ENSPPRG00000006599	SSB	90	59.783	Panthera_pardus
ENSTNIG00000000915	ssb	100	59.783	ENSPTIG00000011021	SSB	88	59.783	Panthera_tigris_altaica
ENSTNIG00000000915	ssb	99	48.361	ENSPTRG00000042880	-	89	48.361	Pan_troglodytes
ENSTNIG00000000915	ssb	100	59.239	ENSPTRG00000012620	SSB	86	69.565	Pan_troglodytes
ENSTNIG00000000915	ssb	94	45.029	ENSPANG00000034126	-	82	45.029	Papio_anubis
ENSTNIG00000000915	ssb	100	59.511	ENSPANG00000007440	SSB	85	69.565	Papio_anubis
ENSTNIG00000000915	ssb	99	42.818	ENSPANG00000031877	-	85	42.818	Papio_anubis
ENSTNIG00000000915	ssb	91	70.988	ENSPKIG00000019325	ssb	97	64.785	Paramormyrops_kingsleyae
ENSTNIG00000000915	ssb	99	59.249	ENSPSIG00000002265	SSB	84	60.870	Pelodiscus_sinensis
ENSTNIG00000000915	ssb	94	69.741	ENSPMGG00000020075	ssb	90	70.605	Periophthalmus_magnuspinnatus
ENSTNIG00000000915	ssb	91	46.201	ENSPMAG00000002982	ssb	87	43.421	Petromyzon_marinus
ENSTNIG00000000915	ssb	100	56.915	ENSPCIG00000028591	-	91	58.266	Phascolarctos_cinereus
ENSTNIG00000000915	ssb	100	75.749	ENSPFOG00000009650	ssb	92	76.965	Poecilia_formosa
ENSTNIG00000000915	ssb	99	75.616	ENSPLAG00000020498	ssb	92	76.965	Poecilia_latipinna
ENSTNIG00000000915	ssb	100	77.112	ENSPMEG00000001051	ssb	92	77.236	Poecilia_mexicana
ENSTNIG00000000915	ssb	100	75.477	ENSPREG00000003708	ssb	96	76.694	Poecilia_reticulata
ENSTNIG00000000915	ssb	100	59.239	ENSPPYG00000012919	SSB	90	59.239	Pongo_abelii
ENSTNIG00000000915	ssb	94	55.491	ENSPCAG00000010276	SSB	90	57.225	Procavia_capensis
ENSTNIG00000000915	ssb	100	56.522	ENSPCOG00000015741	-	92	67.241	Propithecus_coquereli
ENSTNIG00000000915	ssb	100	52.446	ENSPCOG00000023189	-	89	52.717	Propithecus_coquereli
ENSTNIG00000000915	ssb	94	59.710	ENSPVAG00000006615	SSB	97	59.710	Pteropus_vampyrus
ENSTNIG00000000915	ssb	100	73.130	ENSPNYG00000006444	ssb	97	70.811	Pundamilia_nyererei
ENSTNIG00000000915	ssb	99	61.685	ENSPNAG00000011708	ssb	90	62.703	Pygocentrus_nattereri
ENSTNIG00000000915	ssb	99	54.026	ENSRNOG00000007998	Ssb	92	54.026	Rattus_norvegicus
ENSTNIG00000000915	ssb	99	55.108	ENSRNOG00000011606	AABR07061825.1	91	55.108	Rattus_norvegicus
ENSTNIG00000000915	ssb	93	51.163	ENSRBIG00000041232	-	88	58.993	Rhinopithecus_bieti
ENSTNIG00000000915	ssb	100	51.613	ENSRBIG00000041972	SSB	88	69.565	Rhinopithecus_bieti
ENSTNIG00000000915	ssb	85	56.250	ENSRBIG00000041608	-	84	56.250	Rhinopithecus_bieti
ENSTNIG00000000915	ssb	99	41.803	ENSRBIG00000029918	-	86	41.803	Rhinopithecus_bieti
ENSTNIG00000000915	ssb	100	59.511	ENSRROG00000040346	SSB	85	69.565	Rhinopithecus_roxellana
ENSTNIG00000000915	ssb	97	51.524	ENSRROG00000031684	-	88	61.486	Rhinopithecus_roxellana
ENSTNIG00000000915	ssb	85	56.731	ENSRROG00000034102	-	77	56.731	Rhinopithecus_roxellana
ENSTNIG00000000915	ssb	99	47.268	ENSRROG00000007149	-	88	47.268	Rhinopithecus_roxellana
ENSTNIG00000000915	ssb	100	59.511	ENSSBOG00000027204	SSB	86	69.565	Saimiri_boliviensis_boliviensis
ENSTNIG00000000915	ssb	100	57.181	ENSSHAG00000018062	SSB	90	58.537	Sarcophilus_harrisii
ENSTNIG00000000915	ssb	100	65.135	ENSSFOG00015000550	ssb	90	65.405	Scleropages_formosus
ENSTNIG00000000915	ssb	100	78.804	ENSSMAG00000013885	ssb	98	79.891	Scophthalmus_maximus
ENSTNIG00000000915	ssb	100	79.292	ENSSDUG00000020117	ssb	92	80.759	Seriola_dumerili
ENSTNIG00000000915	ssb	100	75.890	ENSSLDG00000002525	ssb	92	77.384	Seriola_lalandi_dorsalis
ENSTNIG00000000915	ssb	94	53.623	ENSSARG00000007747	SSB	90	53.623	Sorex_araneus
ENSTNIG00000000915	ssb	100	58.667	ENSSPUG00000012112	SSB	90	60.763	Sphenodon_punctatus
ENSTNIG00000000915	ssb	100	79.292	ENSSPAG00000005696	ssb	95	80.926	Stegastes_partitus
ENSTNIG00000000915	ssb	91	57.143	ENSSSCG00000015938	SSB	91	54.201	Sus_scrofa
ENSTNIG00000000915	ssb	100	58.919	ENSTGUG00000007942	SSB	89	59.563	Taeniopygia_guttata
ENSTNIG00000000915	ssb	100	87.123	ENSTRUG00000017839	ssb	92	88.011	Takifugu_rubripes
ENSTNIG00000000915	ssb	80	69.565	ENSTBEG00000009056	SSB	72	69.565	Tupaia_belangeri
ENSTNIG00000000915	ssb	100	60.326	ENSTTRG00000002152	SSB	90	60.326	Tursiops_truncatus
ENSTNIG00000000915	ssb	100	59.511	ENSUAMG00000027833	SSB	96	59.511	Ursus_americanus
ENSTNIG00000000915	ssb	100	59.511	ENSUMAG00000013907	SSB	90	59.511	Ursus_maritimus
ENSTNIG00000000915	ssb	100	60.054	ENSVPAG00000007183	SSB	91	60.054	Vicugna_pacos
ENSTNIG00000000915	ssb	100	59.511	ENSVVUG00000016573	SSB	70	59.511	Vulpes_vulpes
ENSTNIG00000000915	ssb	100	55.707	ENSXETG00000025402	ssb	86	55.707	Xenopus_tropicalis
ENSTNIG00000000915	ssb	100	71.662	ENSXCOG00000019109	ssb	93	78.571	Xiphophorus_couchianus
ENSTNIG00000000915	ssb	100	73.842	ENSXMAG00000004888	ssb	91	75.068	Xiphophorus_maculatus