EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000000916 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apb
Alias: secp43|trnau1ap|trnau1apl|trspap1|wu:fa56b07|wu:fc12c07|wu:fc69f09|zgc:113964|zgc:77884
Full Name: tRNA selenocysteine 1 associated protein 1b
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3767 bases
Position: chrUn_random:70078393-70082159
Accession: ZDB-GENE-040426-2386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000003059	RRM_1	PF00076.22	2.8e-30	1	2
ENSTNIP00000003059	RRM_1	PF00076.22	2.8e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000000660	-	891	-	ENSTNIP00000003059	296 (aa)	-	H3C490

Gene Model

Click here to download ENSTNIG00000000916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000000916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000000916	trnau1apb	95	42.761	ENSTNIG00000006129	trnau1apa	92	44.599

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000000916	trnau1apb	100	67.532	ENSAPOG00000010086	trnau1apb	99	70.608	Acanthochromis_polyacanthus
ENSTNIG00000000916	trnau1apb	100	72.642	ENSACIG00000001863	trnau1apb	99	74.214	Amphilophus_citrinellus
ENSTNIG00000000916	trnau1apb	100	67.953	ENSAOCG00000011891	trnau1apb	99	69.436	Amphiprion_ocellaris
ENSTNIG00000000916	trnau1apb	100	67.267	ENSAPEG00000008029	trnau1apb	99	70.871	Amphiprion_percula
ENSTNIG00000000916	trnau1apb	100	65.579	ENSATEG00000002196	trnau1apb	99	69.139	Anabas_testudineus
ENSTNIG00000000916	trnau1apb	100	71.385	ENSACLG00000003016	trnau1apb	99	72.840	Astatotilapia_calliptera
ENSTNIG00000000916	trnau1apb	99	61.356	ENSAMXG00000001805	trnau1apb	98	61.386	Astyanax_mexicanus
ENSTNIG00000000916	trnau1apb	99	65.373	ENSCSEG00000018215	trnau1apb	99	66.567	Cynoglossus_semilaevis
ENSTNIG00000000916	trnau1apb	96	65.951	ENSCVAG00000017866	trnau1apb	100	66.361	Cyprinodon_variegatus
ENSTNIG00000000916	trnau1apb	100	55.312	ENSDARG00000056475	trnau1apb	98	57.188	Danio_rerio
ENSTNIG00000000916	trnau1apb	65	76.684	ENSELUG00000016683	trnau1apb	98	58.125	Esox_lucius
ENSTNIG00000000916	trnau1apb	100	66.569	ENSFHEG00000001267	trnau1apb	99	65.689	Fundulus_heteroclitus
ENSTNIG00000000916	trnau1apb	100	63.253	ENSGMOG00000001160	trnau1apb	99	65.060	Gadus_morhua
ENSTNIG00000000916	trnau1apb	59	91.954	ENSGAFG00000006770	trnau1apb	99	68.932	Gambusia_affinis
ENSTNIG00000000916	trnau1apb	100	68.902	ENSGACG00000014944	trnau1apb	99	70.122	Gasterosteus_aculeatus
ENSTNIG00000000916	trnau1apb	68	39.423	ENSGAGG00000022384	-	78	39.423	Gopherus_agassizii
ENSTNIG00000000916	trnau1apb	100	74.086	ENSHBUG00000018944	trnau1apb	99	74.086	Haplochromis_burtoni
ENSTNIG00000000916	trnau1apb	74	80.995	ENSHCOG00000011350	trnau1apb	70	80.995	Hippocampus_comes
ENSTNIG00000000916	trnau1apb	99	56.550	ENSIPUG00000008843	tsp1l	99	59.561	Ictalurus_punctatus
ENSTNIG00000000916	trnau1apb	100	71.299	ENSLBEG00000020480	trnau1apb	99	72.508	Labrus_bergylta
ENSTNIG00000000916	trnau1apb	100	49.191	ENSLOCG00000013175	trnau1apb	98	50.162	Lepisosteus_oculatus
ENSTNIG00000000916	trnau1apb	100	66.369	ENSMAMG00000012192	trnau1apb	99	68.750	Mastacembelus_armatus
ENSTNIG00000000916	trnau1apb	100	68.249	ENSMZEG00005014852	trnau1apb	99	68.452	Maylandia_zebra
ENSTNIG00000000916	trnau1apb	68	37.981	ENSMGAG00000003234	-	98	40.191	Meleagris_gallopavo
ENSTNIG00000000916	trnau1apb	96	59.587	ENSMMOG00000021521	trnau1apb	99	59.882	Mola_mola
ENSTNIG00000000916	trnau1apb	99	66.234	ENSMALG00000003772	trnau1apb	99	67.742	Monopterus_albus
ENSTNIG00000000916	trnau1apb	97	70.755	ENSNBRG00000000751	trnau1apb	98	72.611	Neolamprologus_brichardi
ENSTNIG00000000916	trnau1apb	100	77.258	ENSONIG00000016639	trnau1apb	100	77.258	Oreochromis_niloticus
ENSTNIG00000000916	trnau1apb	100	67.552	ENSORLG00020004464	trnau1apb	100	67.485	Oryzias_latipes_hni
ENSTNIG00000000916	trnau1apb	100	67.552	ENSORLG00015021098	trnau1apb	99	68.437	Oryzias_latipes_hsok
ENSTNIG00000000916	trnau1apb	99	56.271	ENSPKIG00000007995	trnau1apb	99	56.129	Paramormyrops_kingsleyae
ENSTNIG00000000916	trnau1apb	68	40.865	ENSPSIG00000004189	-	78	40.865	Pelodiscus_sinensis
ENSTNIG00000000916	trnau1apb	99	66.129	ENSPMGG00000018509	trnau1apb	99	67.524	Periophthalmus_magnuspinnatus
ENSTNIG00000000916	trnau1apb	100	71.019	ENSPFOG00000003938	trnau1apb	99	72.293	Poecilia_formosa
ENSTNIG00000000916	trnau1apb	100	65.689	ENSPLAG00000015480	trnau1apb	99	66.276	Poecilia_latipinna
ENSTNIG00000000916	trnau1apb	100	65.689	ENSPMEG00000012743	trnau1apb	99	66.276	Poecilia_mexicana
ENSTNIG00000000916	trnau1apb	100	62.170	ENSPREG00000015035	trnau1apb	99	65.103	Poecilia_reticulata
ENSTNIG00000000916	trnau1apb	99	70.405	ENSPNYG00000012127	trnau1apb	98	71.875	Pundamilia_nyererei
ENSTNIG00000000916	trnau1apb	99	55.911	ENSPNAG00000019138	trnau1apb	97	59.295	Pygocentrus_nattereri
ENSTNIG00000000916	trnau1apb	99	55.215	ENSSFOG00015014158	trnau1apb	98	56.970	Scleropages_formosus
ENSTNIG00000000916	trnau1apb	99	65.766	ENSSMAG00000001745	trnau1apb	99	67.964	Scophthalmus_maximus
ENSTNIG00000000916	trnau1apb	99	67.262	ENSSDUG00000011109	trnau1apb	99	69.345	Seriola_dumerili
ENSTNIG00000000916	trnau1apb	99	67.560	ENSSLDG00000012947	trnau1apb	99	69.643	Seriola_lalandi_dorsalis
ENSTNIG00000000916	trnau1apb	67	31.474	ENSSPUG00000016701	-	82	32.540	Sphenodon_punctatus
ENSTNIG00000000916	trnau1apb	100	75.000	ENSSPAG00000006917	trnau1apb	99	74.277	Stegastes_partitus
ENSTNIG00000000916	trnau1apb	100	72.054	ENSTRUG00000008608	trnau1apb	99	72.700	Takifugu_rubripes
ENSTNIG00000000916	trnau1apb	95	68.214	ENSXCOG00000007974	trnau1apb	94	70.383	Xiphophorus_couchianus
ENSTNIG00000000916	trnau1apb	100	64.223	ENSXMAG00000029918	trnau1apb	99	66.276	Xiphophorus_maculatus