EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000001002 (Gene tree)
Gene ID: -
Gene Symbol: ercc6l
Alias: si:ch211-278b8.3
Full Name: excision repair cross-complementation group 6-like
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1695 bases
Position: chr12:12362233-12363927
Accession: ZDB-GENE-060531-56
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000002584	ResIII	PF04851.15	6.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000002724	-	1695	-	ENSTNIP00000002584	565 (aa)	-	H3C2W6

Gene Model

Click here to download ENSTNIG00000001002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000001002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000001002	ercc6l	87	30.219	ENSTNIG00000004902	chd1l	50	30.060
ENSTNIG00000001002	ercc6l	87	30.268	ENSTNIG00000017585	smarcad1a	54	30.268

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000001002	ercc6l	99	73.936	ENSAPOG00000011392	ercc6l	81	73.936	Acanthochromis_polyacanthus
ENSTNIG00000001002	ercc6l	100	77.699	ENSATEG00000012969	ercc6l	51	76.460	Anabas_testudineus
ENSTNIG00000001002	ercc6l	93	62.167	ENSACAG00000028866	-	69	62.941	Anolis_carolinensis
ENSTNIG00000001002	ercc6l	93	62.167	ENSACAG00000029354	-	71	62.941	Anolis_carolinensis
ENSTNIG00000001002	ercc6l	86	34.337	ENSAMXG00000035908	-	89	34.369	Astyanax_mexicanus
ENSTNIG00000001002	ercc6l	99	63.717	ENSCPBG00000011965	ERCC6L	77	66.324	Chrysemys_picta_bellii
ENSTNIG00000001002	ercc6l	100	52.105	ENSCSAVG00000010291	-	97	52.105	Ciona_savignyi
ENSTNIG00000001002	ercc6l	100	70.088	ENSCVAG00000008090	ercc6l	77	69.912	Cyprinodon_variegatus
ENSTNIG00000001002	ercc6l	98	68.705	ENSFHEG00000007269	-	78	68.705	Fundulus_heteroclitus
ENSTNIG00000001002	ercc6l	77	76.608	ENSGAFG00000020545	-	99	76.833	Gambusia_affinis
ENSTNIG00000001002	ercc6l	99	76.596	ENSGACG00000001096	ercc6l	96	76.596	Gasterosteus_aculeatus
ENSTNIG00000001002	ercc6l	99	76.596	ENSLBEG00000000091	ercc6l	54	76.418	Labrus_bergylta
ENSTNIG00000001002	ercc6l	72	41.769	ENSLOCG00000017476	-	95	42.105	Lepisosteus_oculatus
ENSTNIG00000001002	ercc6l	99	79.152	ENSMMOG00000020762	ercc6l	85	87.755	Mola_mola
ENSTNIG00000001002	ercc6l	84	79.927	ENSORLG00000024240	ercc6l	73	79.927	Oryzias_latipes
ENSTNIG00000001002	ercc6l	100	74.472	ENSORLG00020014999	ercc6l	50	74.472	Oryzias_latipes_hni
ENSTNIG00000001002	ercc6l	71	82.500	ENSORLG00015007108	ercc6l	70	82.500	Oryzias_latipes_hsok
ENSTNIG00000001002	ercc6l	100	73.063	ENSPMGG00000023343	ercc6l	53	73.239	Periophthalmus_magnuspinnatus
ENSTNIG00000001002	ercc6l	99	59.180	ENSPMAG00000005064	ercc6l	78	58.025	Petromyzon_marinus
ENSTNIG00000001002	ercc6l	100	74.513	ENSPLAG00000005575	ercc6l	51	74.640	Poecilia_latipinna
ENSTNIG00000001002	ercc6l	99	77.482	ENSPNYG00000013185	ercc6l	52	77.362	Pundamilia_nyererei
ENSTNIG00000001002	ercc6l	66	39.764	ENSPNAG00000029823	-	79	43.523	Pygocentrus_nattereri
ENSTNIG00000001002	ercc6l	100	58.537	ENSSHAG00000001331	-	51	58.014	Sarcophilus_harrisii
ENSTNIG00000001002	ercc6l	100	78.761	ENSSLDG00000014910	ercc6l	50	78.761	Seriola_lalandi_dorsalis
ENSTNIG00000001002	ercc6l	100	61.847	ENSSPUG00000005866	ERCC6L	51	61.888	Sphenodon_punctatus
ENSTNIG00000001002	ercc6l	100	61.525	ENSTGUG00000004992	ERCC6L	100	62.045	Taeniopygia_guttata
ENSTNIG00000001002	ercc6l	89	72.311	ENSXCOG00000011494	ercc6l	68	72.311	Xiphophorus_couchianus
ENSTNIG00000001002	ercc6l	100	74.690	ENSXMAG00000000948	ercc6l	53	74.690	Xiphophorus_maculatus