EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000001043 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-247i17.1
Alias: -
Full Name: si:ch211-247i17.1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2038 bases
Position: chr13:11257864-11259901
Accession: ZDB-GENE-131121-275
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000000616	MMR_HSR1	PF01926.23	5.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000003968	-	606	-	ENSTNIP00000000616	202 (aa)	-	H3BXA3

Gene Model

Click here to download ENSTNIG00000001043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000001043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000001043	si:ch211-247i17.1	84	32.000	ENSTNIG00000005090	rab25a	80	32.000
ENSTNIG00000001043	si:ch211-247i17.1	79	51.250	ENSTNIG00000008784	-	98	51.250
ENSTNIG00000001043	si:ch211-247i17.1	91	32.240	ENSTNIG00000009196	rab5aa	84	32.240
ENSTNIG00000001043	si:ch211-247i17.1	84	33.728	ENSTNIG00000011300	si:dkey-16l2.16	86	33.333
ENSTNIG00000001043	si:ch211-247i17.1	79	36.025	ENSTNIG00000004511	-	99	36.025
ENSTNIG00000001043	si:ch211-247i17.1	64	34.091	ENSTNIG00000006917	si:cabz01085950.1	97	34.091
ENSTNIG00000001043	si:ch211-247i17.1	84	41.176	ENSTNIG00000001260	RAB15	79	41.176
ENSTNIG00000001043	si:ch211-247i17.1	77	39.103	ENSTNIG00000015000	zgc:101559	66	39.103
ENSTNIG00000001043	si:ch211-247i17.1	80	37.349	ENSTNIG00000016231	rab34a	63	37.349
ENSTNIG00000001043	si:ch211-247i17.1	79	31.875	ENSTNIG00000002003	-	78	31.875
ENSTNIG00000001043	si:ch211-247i17.1	74	40.667	ENSTNIG00000010125	rab33ba	63	40.667
ENSTNIG00000001043	si:ch211-247i17.1	73	38.000	ENSTNIG00000010122	rab33a	64	38.000
ENSTNIG00000001043	si:ch211-247i17.1	83	30.539	ENSTNIG00000013137	ran	75	30.539
ENSTNIG00000001043	si:ch211-247i17.1	81	33.728	ENSTNIG00000011114	-	81	33.728
ENSTNIG00000001043	si:ch211-247i17.1	82	46.988	ENSTNIG00000001448	-	98	46.988
ENSTNIG00000001043	si:ch211-247i17.1	75	35.762	ENSTNIG00000016575	rab23	72	35.882
ENSTNIG00000001043	si:ch211-247i17.1	81	36.970	ENSTNIG00000018498	-	73	36.970
ENSTNIG00000001043	si:ch211-247i17.1	81	31.098	ENSTNIG00000018267	rab22a	84	31.098
ENSTNIG00000001043	si:ch211-247i17.1	81	33.129	ENSTNIG00000013184	-	74	33.129
ENSTNIG00000001043	si:ch211-247i17.1	81	33.129	ENSTNIG00000013182	-	75	33.129
ENSTNIG00000001043	si:ch211-247i17.1	84	36.207	ENSTNIG00000014859	rab12	72	36.207
ENSTNIG00000001043	si:ch211-247i17.1	82	40.000	ENSTNIG00000015257	rab6bb	79	40.000
ENSTNIG00000001043	si:ch211-247i17.1	84	43.787	ENSTNIG00000016414	rab15	79	43.787
ENSTNIG00000001043	si:ch211-247i17.1	92	34.197	ENSTNIG00000001195	rab9a	90	34.197
ENSTNIG00000001043	si:ch211-247i17.1	92	36.022	ENSTNIG00000006650	RAB19	85	36.022
ENSTNIG00000001043	si:ch211-247i17.1	78	39.634	ENSTNIG00000008717	rab18a	78	39.634
ENSTNIG00000001043	si:ch211-247i17.1	83	33.533	ENSTNIG00000009039	rab14	75	33.533
ENSTNIG00000001043	si:ch211-247i17.1	78	30.000	ENSTNIG00000017951	rabl2	68	30.000
ENSTNIG00000001043	si:ch211-247i17.1	81	33.133	ENSTNIG00000003679	-	77	33.133
ENSTNIG00000001043	si:ch211-247i17.1	87	33.708	ENSTNIG00000011711	rab5c	80	33.708
ENSTNIG00000001043	si:ch211-247i17.1	76	39.873	ENSTNIG00000012343	-	68	40.000
ENSTNIG00000001043	si:ch211-247i17.1	80	33.735	ENSTNIG00000001956	RAB9A	78	33.735
ENSTNIG00000001043	si:ch211-247i17.1	81	32.335	ENSTNIG00000017844	-	88	32.335
ENSTNIG00000001043	si:ch211-247i17.1	76	37.255	ENSTNIG00000004004	-	83	37.255
ENSTNIG00000001043	si:ch211-247i17.1	81	33.728	ENSTNIG00000014604	RAB7A	81	33.728
ENSTNIG00000001043	si:ch211-247i17.1	99	41.206	ENSTNIG00000018319	-	99	41.206
ENSTNIG00000001043	si:ch211-247i17.1	81	33.129	ENSTNIG00000011081	rab11bb	74	33.129
ENSTNIG00000001043	si:ch211-247i17.1	97	35.961	ENSTNIG00000016831	RAB41	94	35.961
ENSTNIG00000001043	si:ch211-247i17.1	83	32.941	ENSTNIG00000016158	rab34b	66	32.941
ENSTNIG00000001043	si:ch211-247i17.1	63	33.594	ENSTNIG00000013920	rab20	51	32.031
ENSTNIG00000001043	si:ch211-247i17.1	57	31.707	ENSTNIG00000005278	arfrp1	86	31.707
ENSTNIG00000001043	si:ch211-247i17.1	76	35.714	ENSTNIG00000003472	rab2a	72	35.714
ENSTNIG00000001043	si:ch211-247i17.1	81	34.756	ENSTNIG00000007882	rab18b	79	34.756

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000001043	si:ch211-247i17.1	81	44.970	WBGene00007067	4R79.2	54	44.970	Caenorhabditis_elegans
ENSTNIG00000001043	si:ch211-247i17.1	81	57.229	ENSGMOG00000017644	si:ch211-247i17.1	94	57.229	Gadus_morhua
ENSTNIG00000001043	si:ch211-247i17.1	81	68.072	ENSGACG00000005397	si:ch211-247i17.1	94	68.072	Gasterosteus_aculeatus
ENSTNIG00000001043	si:ch211-247i17.1	83	55.882	ENSMGAG00000009012	-	98	55.882	Meleagris_gallopavo
ENSTNIG00000001043	si:ch211-247i17.1	83	55.030	ENSPSIG00000012698	-	98	55.030	Pelodiscus_sinensis
ENSTNIG00000001043	si:ch211-247i17.1	83	56.213	ENSTGUG00000009776	-	97	56.213	Taeniopygia_guttata
ENSTNIG00000001043	si:ch211-247i17.1	53	70.000	ENSXMAG00000003735	si:ch211-247i17.1	92	70.000	Xiphophorus_maculatus