EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000001154 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3536 bases
Position: chrUn_random:11207148-11210683
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000002549	RRM_1	PF00076.22	6.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000001439	-	732	-	ENSTNIP00000002549	239 (aa)	-	H3C2T1

Gene Model

Click here to download ENSTNIG00000001154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000001154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000001154	-	97	47.718	ENSTNIG00000010542	-	79	47.951
ENSTNIG00000001154	-	95	36.170	ENSTNIG00000001303	zgc:123010	71	36.170

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000001154	-	98	38.174	ENSAPOG00000019633	zgc:123010	51	38.174	Acanthochromis_polyacanthus
ENSTNIG00000001154	-	99	35.000	ENSAPOG00000001034	-	58	35.000	Acanthochromis_polyacanthus
ENSTNIG00000001154	-	98	37.021	ENSACIG00000021684	zgc:123010	60	37.021	Amphilophus_citrinellus
ENSTNIG00000001154	-	86	40.291	ENSAPLG00000013566	-	99	40.291	Anas_platyrhynchos
ENSTNIG00000001154	-	100	38.494	ENSDARG00000039082	zgc:123010	50	38.494	Danio_rerio
ENSTNIG00000001154	-	98	37.917	ENSELUG00000022008	zgc:123010	56	36.170	Esox_lucius
ENSTNIG00000001154	-	100	40.690	ENSELUG00000002009	si:dkey-33c12.4	73	42.000	Esox_lucius
ENSTNIG00000001154	-	90	37.450	ENSFALG00000008867	-	94	37.450	Ficedula_albicollis
ENSTNIG00000001154	-	99	39.095	ENSGMOG00000018473	zgc:123010	65	39.095	Gadus_morhua
ENSTNIG00000001154	-	74	43.575	ENSGMOG00000001292	-	70	43.575	Gadus_morhua
ENSTNIG00000001154	-	97	35.581	ENSGALG00000036747	TTC31	51	35.581	Gallus_gallus
ENSTNIG00000001154	-	98	38.174	ENSGACG00000007620	zgc:123010	64	38.174	Gasterosteus_aculeatus
ENSTNIG00000001154	-	100	45.868	ENSGACG00000004936	-	76	45.868	Gasterosteus_aculeatus
ENSTNIG00000001154	-	98	37.815	ENSLACG00000009001	zgc:123010	53	36.585	Latimeria_chalumnae
ENSTNIG00000001154	-	91	37.156	ENSMAMG00000003394	-	60	37.156	Mastacembelus_armatus
ENSTNIG00000001154	-	96	38.428	ENSMAMG00000001145	zgc:123010	56	38.428	Mastacembelus_armatus
ENSTNIG00000001154	-	91	37.156	ENSMAMG00000002460	-	54	37.156	Mastacembelus_armatus
ENSTNIG00000001154	-	91	37.156	ENSMAMG00000003439	-	61	37.156	Mastacembelus_armatus
ENSTNIG00000001154	-	91	36.697	ENSMAMG00000002377	-	51	36.697	Mastacembelus_armatus
ENSTNIG00000001154	-	100	35.270	ENSMZEG00005014740	-	54	37.156	Maylandia_zebra
ENSTNIG00000001154	-	90	34.483	ENSMMOG00000017955	-	56	34.483	Mola_mola
ENSTNIG00000001154	-	99	45.763	ENSONIG00000012263	-	76	45.763	Oreochromis_niloticus
ENSTNIG00000001154	-	99	61.714	ENSONIG00000007538	-	92	61.250	Oreochromis_niloticus
ENSTNIG00000001154	-	98	34.711	ENSONIG00000018353	zgc:123010	50	34.711	Oreochromis_niloticus
ENSTNIG00000001154	-	90	36.283	ENSONIG00000000297	-	73	36.283	Oreochromis_niloticus
ENSTNIG00000001154	-	98	39.004	ENSORLG00000007675	zgc:123010	51	39.004	Oryzias_latipes
ENSTNIG00000001154	-	100	38.776	ENSORLG00020003457	zgc:123010	52	38.776	Oryzias_latipes_hni
ENSTNIG00000001154	-	98	37.190	ENSPKIG00000015521	zgc:123010	53	37.037	Paramormyrops_kingsleyae
ENSTNIG00000001154	-	98	35.745	ENSPMGG00000020251	zgc:123010	54	35.745	Periophthalmus_magnuspinnatus
ENSTNIG00000001154	-	93	37.054	ENSPMAG00000009352	-	76	37.054	Petromyzon_marinus
ENSTNIG00000001154	-	91	34.404	ENSPMAG00000004544	zgc:123010	77	34.404	Petromyzon_marinus
ENSTNIG00000001154	-	99	56.818	ENSPFOG00000017092	-	54	56.818	Poecilia_formosa
ENSTNIG00000001154	-	100	41.214	ENSPMEG00000009905	-	50	41.346	Poecilia_mexicana
ENSTNIG00000001154	-	96	36.681	ENSPREG00000019587	zgc:123010	52	36.681	Poecilia_reticulata
ENSTNIG00000001154	-	99	36.576	ENSPNYG00000023304	-	61	36.576	Pundamilia_nyererei
ENSTNIG00000001154	-	98	37.657	ENSSFOG00015021394	zgc:123010	50	37.657	Scleropages_formosus
ENSTNIG00000001154	-	98	37.190	ENSSMAG00000002904	zgc:123010	50	37.190	Scophthalmus_maximus
ENSTNIG00000001154	-	95	37.339	ENSXETG00000033896	-	79	37.339	Xenopus_tropicalis
ENSTNIG00000001154	-	96	35.714	ENSXCOG00000012281	zgc:123010	57	35.714	Xiphophorus_couchianus
ENSTNIG00000001154	-	98	37.917	ENSXMAG00000002598	zgc:123010	51	37.917	Xiphophorus_maculatus