EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000001159 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-89b17.4
Alias: fj14g06|fj60g01|fk87f09|wu:fj14g06|wu:fj60g01|wu:fk87f09
Full Name: si:dkey-89b17.4
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 4734 bases
Position: chr3:15261460-15266193
Accession: ZDB-GENE-030131-8215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000002343	zf-C2H2	PF00096.26	1.2e-62	1	11
ENSTNIP00000002343	zf-C2H2	PF00096.26	1.2e-62	2	11
ENSTNIP00000002343	zf-C2H2	PF00096.26	1.2e-62	3	11
ENSTNIP00000002343	zf-C2H2	PF00096.26	1.2e-62	4	11
ENSTNIP00000002343	zf-C2H2	PF00096.26	1.2e-62	5	11
ENSTNIP00000002343	zf-C2H2	PF00096.26	1.2e-62	6	11
ENSTNIP00000002343	zf-C2H2	PF00096.26	1.2e-62	7	11
ENSTNIP00000002343	zf-C2H2	PF00096.26	1.2e-62	8	11
ENSTNIP00000002343	zf-C2H2	PF00096.26	1.2e-62	9	11
ENSTNIP00000002343	zf-C2H2	PF00096.26	1.2e-62	10	11
ENSTNIP00000002343	zf-C2H2	PF00096.26	1.2e-62	11	11
ENSTNIP00000002343	zf-met	PF12874.7	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000000811	-	1782	-	ENSTNIP00000002343	594 (aa)	-	H3C275

Gene Model

Click here to download ENSTNIG00000001159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000001159's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000001159	si:dkey-89b17.4	98	33.987	ENSTNIG00000011367	znf710b	51	33.987
ENSTNIG00000001159	si:dkey-89b17.4	99	30.667	ENSTNIG00000001401	zbtb47b	54	30.667
ENSTNIG00000001159	si:dkey-89b17.4	99	33.974	ENSTNIG00000002343	-	90	33.974
ENSTNIG00000001159	si:dkey-89b17.4	99	34.252	ENSTNIG00000002344	-	100	34.615
ENSTNIG00000001159	si:dkey-89b17.4	99	33.157	ENSTNIG00000003979	-	98	33.157
ENSTNIG00000001159	si:dkey-89b17.4	99	32.328	ENSTNIG00000005798	zbtb16a	69	32.328
ENSTNIG00000001159	si:dkey-89b17.4	99	36.334	ENSTNIG00000005856	-	99	36.334
ENSTNIG00000001159	si:dkey-89b17.4	96	40.336	ENSTNIG00000003865	-	58	40.336
ENSTNIG00000001159	si:dkey-89b17.4	99	32.432	ENSTNIG00000012449	zbtb48	52	32.432
ENSTNIG00000001159	si:dkey-89b17.4	97	39.091	ENSTNIG00000018384	scrt1b	52	39.091
ENSTNIG00000001159	si:dkey-89b17.4	98	31.651	ENSTNIG00000008018	-	55	33.953
ENSTNIG00000001159	si:dkey-89b17.4	99	34.932	ENSTNIG00000010722	GZF1	53	34.932
ENSTNIG00000001159	si:dkey-89b17.4	97	36.196	ENSTNIG00000017000	-	100	36.196
ENSTNIG00000001159	si:dkey-89b17.4	99	40.260	ENSTNIG00000000320	-	100	36.429
ENSTNIG00000001159	si:dkey-89b17.4	99	36.607	ENSTNIG00000003834	gfi1b	53	36.607
ENSTNIG00000001159	si:dkey-89b17.4	99	33.333	ENSTNIG00000008200	-	99	33.333
ENSTNIG00000001159	si:dkey-89b17.4	99	35.366	ENSTNIG00000018001	e4f1	59	35.263
ENSTNIG00000001159	si:dkey-89b17.4	98	31.880	ENSTNIG00000010902	zbtb17	56	31.892
ENSTNIG00000001159	si:dkey-89b17.4	98	31.841	ENSTNIG00000005901	prdm5	77	31.527
ENSTNIG00000001159	si:dkey-89b17.4	98	31.818	ENSTNIG00000001921	-	67	31.818
ENSTNIG00000001159	si:dkey-89b17.4	99	30.579	ENSTNIG00000000528	-	99	30.163
ENSTNIG00000001159	si:dkey-89b17.4	99	31.841	ENSTNIG00000003880	znf319b	88	31.841
ENSTNIG00000001159	si:dkey-89b17.4	99	34.259	ENSTNIG00000008100	-	99	37.374
ENSTNIG00000001159	si:dkey-89b17.4	97	40.000	ENSTNIG00000012473	scrt2	50	40.000
ENSTNIG00000001159	si:dkey-89b17.4	81	38.667	ENSTNIG00000003479	-	100	40.741
ENSTNIG00000001159	si:dkey-89b17.4	99	32.661	ENSTNIG00000009831	-	96	32.661
ENSTNIG00000001159	si:dkey-89b17.4	96	43.802	ENSTNIG00000008504	snai2	72	43.802
ENSTNIG00000001159	si:dkey-89b17.4	97	35.616	ENSTNIG00000005479	-	99	35.616
ENSTNIG00000001159	si:dkey-89b17.4	99	36.552	ENSTNIG00000000934	-	100	33.505
ENSTNIG00000001159	si:dkey-89b17.4	99	34.568	ENSTNIG00000008154	-	100	30.046
ENSTNIG00000001159	si:dkey-89b17.4	99	32.379	ENSTNIG00000005023	-	99	35.075
ENSTNIG00000001159	si:dkey-89b17.4	98	35.686	ENSTNIG00000007805	zbtb41	56	46.154
ENSTNIG00000001159	si:dkey-89b17.4	99	33.256	ENSTNIG00000001164	ZNF628	100	34.279
ENSTNIG00000001159	si:dkey-89b17.4	99	32.524	ENSTNIG00000011188	-	99	32.524
ENSTNIG00000001159	si:dkey-89b17.4	99	42.857	ENSTNIG00000008242	-	99	42.857
ENSTNIG00000001159	si:dkey-89b17.4	98	44.936	ENSTNIG00000000073	znf646	98	48.142
ENSTNIG00000001159	si:dkey-89b17.4	99	32.051	ENSTNIG00000019069	-	100	30.918
ENSTNIG00000001159	si:dkey-89b17.4	99	39.024	ENSTNIG00000000330	-	100	39.024
ENSTNIG00000001159	si:dkey-89b17.4	99	34.072	ENSTNIG00000018984	-	99	35.030
ENSTNIG00000001159	si:dkey-89b17.4	92	38.235	ENSTNIG00000012460	sall4	57	34.667
ENSTNIG00000001159	si:dkey-89b17.4	98	35.359	ENSTNIG00000000277	-	93	35.359

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000001159	si:dkey-89b17.4	99	54.237	ENSAPOG00000020151	znf646	99	54.237	Acanthochromis_polyacanthus
ENSTNIG00000001159	si:dkey-89b17.4	98	53.448	ENSAPOG00000018015	si:dkey-89b17.4	96	43.333	Acanthochromis_polyacanthus
ENSTNIG00000001159	si:dkey-89b17.4	100	53.659	ENSACIG00000001025	si:dkey-89b17.4	90	55.385	Amphilophus_citrinellus
ENSTNIG00000001159	si:dkey-89b17.4	99	76.471	ENSACIG00000023049	znf646	98	54.930	Amphilophus_citrinellus
ENSTNIG00000001159	si:dkey-89b17.4	99	54.237	ENSAOCG00000012062	znf646	99	44.666	Amphiprion_ocellaris
ENSTNIG00000001159	si:dkey-89b17.4	98	53.448	ENSAOCG00000018684	si:dkey-89b17.4	96	43.056	Amphiprion_ocellaris
ENSTNIG00000001159	si:dkey-89b17.4	99	53.448	ENSAPEG00000007719	si:dkey-89b17.4	99	55.352	Amphiprion_percula
ENSTNIG00000001159	si:dkey-89b17.4	99	54.237	ENSAPEG00000006427	znf646	99	44.239	Amphiprion_percula
ENSTNIG00000001159	si:dkey-89b17.4	99	55.357	ENSATEG00000015206	znf646	99	55.357	Anabas_testudineus
ENSTNIG00000001159	si:dkey-89b17.4	98	41.860	ENSATEG00000016814	si:dkey-89b17.4	96	43.953	Anabas_testudineus
ENSTNIG00000001159	si:dkey-89b17.4	99	53.448	ENSACLG00000016017	si:dkey-89b17.4	96	42.778	Astatotilapia_calliptera
ENSTNIG00000001159	si:dkey-89b17.4	99	42.280	ENSACLG00000012712	znf646	99	41.111	Astatotilapia_calliptera
ENSTNIG00000001159	si:dkey-89b17.4	99	42.290	ENSAMXG00000001155	si:dkey-89b17.4	96	42.757	Astyanax_mexicanus
ENSTNIG00000001159	si:dkey-89b17.4	100	56.667	ENSAMXG00000035525	znf646	98	71.429	Astyanax_mexicanus
ENSTNIG00000001159	si:dkey-89b17.4	99	47.690	ENSCSEG00000010769	si:dkey-89b17.4	98	53.492	Cynoglossus_semilaevis
ENSTNIG00000001159	si:dkey-89b17.4	99	42.727	ENSCSEG00000012389	znf646	98	42.969	Cynoglossus_semilaevis
ENSTNIG00000001159	si:dkey-89b17.4	100	41.860	ENSCVAG00000012420	si:dkey-89b17.4	97	44.498	Cyprinodon_variegatus
ENSTNIG00000001159	si:dkey-89b17.4	99	58.333	ENSDARG00000061424	znf646	99	66.129	Danio_rerio
ENSTNIG00000001159	si:dkey-89b17.4	99	46.134	ENSDARG00000075545	si:dkey-89b17.4	99	43.396	Danio_rerio
ENSTNIG00000001159	si:dkey-89b17.4	99	39.468	ENSELUG00000015516	si:dkey-89b17.4	98	57.627	Esox_lucius
ENSTNIG00000001159	si:dkey-89b17.4	99	52.632	ENSELUG00000010423	znf646	99	37.622	Esox_lucius
ENSTNIG00000001159	si:dkey-89b17.4	99	43.531	ENSFHEG00000000561	znf646	98	44.577	Fundulus_heteroclitus
ENSTNIG00000001159	si:dkey-89b17.4	99	41.860	ENSFHEG00000019457	si:dkey-89b17.4	97	41.860	Fundulus_heteroclitus
ENSTNIG00000001159	si:dkey-89b17.4	99	51.220	ENSGMOG00000016554	znf646	99	51.220	Gadus_morhua
ENSTNIG00000001159	si:dkey-89b17.4	100	41.860	ENSGAFG00000000345	si:dkey-89b17.4	97	42.276	Gambusia_affinis
ENSTNIG00000001159	si:dkey-89b17.4	96	52.381	ENSGAFG00000016353	-	82	52.381	Gambusia_affinis
ENSTNIG00000001159	si:dkey-89b17.4	99	46.751	ENSGACG00000014714	si:dkey-89b17.4	99	48.276	Gasterosteus_aculeatus
ENSTNIG00000001159	si:dkey-89b17.4	99	53.571	ENSGACG00000008733	znf646	98	55.435	Gasterosteus_aculeatus
ENSTNIG00000001159	si:dkey-89b17.4	99	52.326	ENSHBUG00000004840	znf646	99	52.326	Haplochromis_burtoni
ENSTNIG00000001159	si:dkey-89b17.4	99	53.448	ENSHBUG00000013093	si:dkey-89b17.4	96	42.778	Haplochromis_burtoni
ENSTNIG00000001159	si:dkey-89b17.4	99	53.168	ENSHCOG00000001901	si:dkey-89b17.4	99	52.132	Hippocampus_comes
ENSTNIG00000001159	si:dkey-89b17.4	99	42.264	ENSHCOG00000014890	znf646	99	43.970	Hippocampus_comes
ENSTNIG00000001159	si:dkey-89b17.4	99	82.143	ENSIPUG00000012845	si:dkey-89b17.4	98	42.824	Ictalurus_punctatus
ENSTNIG00000001159	si:dkey-89b17.4	99	56.667	ENSIPUG00000018102	znf646	98	41.667	Ictalurus_punctatus
ENSTNIG00000001159	si:dkey-89b17.4	97	64.493	ENSIPUG00000012830	-	85	64.493	Ictalurus_punctatus
ENSTNIG00000001159	si:dkey-89b17.4	99	57.377	ENSKMAG00000011982	znf646	93	57.377	Kryptolebias_marmoratus
ENSTNIG00000001159	si:dkey-89b17.4	99	91.228	ENSKMAG00000014037	si:dkey-89b17.4	97	42.246	Kryptolebias_marmoratus
ENSTNIG00000001159	si:dkey-89b17.4	98	89.474	ENSLBEG00000020291	si:dkey-89b17.4	98	43.953	Labrus_bergylta
ENSTNIG00000001159	si:dkey-89b17.4	99	40.694	ENSLBEG00000016562	znf646	98	44.156	Labrus_bergylta
ENSTNIG00000001159	si:dkey-89b17.4	99	39.429	ENSLOCG00000003238	si:dkey-89b17.4	99	42.661	Lepisosteus_oculatus
ENSTNIG00000001159	si:dkey-89b17.4	98	41.860	ENSMAMG00000009604	si:dkey-89b17.4	97	43.056	Mastacembelus_armatus
ENSTNIG00000001159	si:dkey-89b17.4	99	44.037	ENSMAMG00000009313	znf646	99	37.731	Mastacembelus_armatus
ENSTNIG00000001159	si:dkey-89b17.4	99	53.448	ENSMZEG00005003901	si:dkey-89b17.4	96	42.778	Maylandia_zebra
ENSTNIG00000001159	si:dkey-89b17.4	99	41.446	ENSMZEG00005011264	znf646	99	41.446	Maylandia_zebra
ENSTNIG00000001159	si:dkey-89b17.4	100	44.879	ENSMMOG00000012741	si:dkey-89b17.4	91	55.766	Mola_mola
ENSTNIG00000001159	si:dkey-89b17.4	99	61.404	ENSMMOG00000002311	znf646	99	61.404	Mola_mola
ENSTNIG00000001159	si:dkey-89b17.4	100	53.448	ENSMALG00000019558	si:dkey-89b17.4	99	55.924	Monopterus_albus
ENSTNIG00000001159	si:dkey-89b17.4	99	43.560	ENSMALG00000002274	-	99	41.631	Monopterus_albus
ENSTNIG00000001159	si:dkey-89b17.4	99	42.280	ENSNBRG00000022534	znf646	99	41.111	Neolamprologus_brichardi
ENSTNIG00000001159	si:dkey-89b17.4	100	53.448	ENSNBRG00000020314	si:dkey-89b17.4	99	54.893	Neolamprologus_brichardi
ENSTNIG00000001159	si:dkey-89b17.4	99	63.378	ENSONIG00000009324	si:dkey-89b17.4	100	59.718	Oreochromis_niloticus
ENSTNIG00000001159	si:dkey-89b17.4	100	49.903	ENSONIG00000019947	-	100	47.007	Oreochromis_niloticus
ENSTNIG00000001159	si:dkey-89b17.4	99	62.069	ENSORLG00000007885	znf646	99	40.746	Oryzias_latipes
ENSTNIG00000001159	si:dkey-89b17.4	99	53.448	ENSORLG00000024255	si:dkey-89b17.4	99	56.032	Oryzias_latipes
ENSTNIG00000001159	si:dkey-89b17.4	99	37.500	ENSORLG00020010285	znf646	99	35.703	Oryzias_latipes_hni
ENSTNIG00000001159	si:dkey-89b17.4	99	38.265	ENSORLG00015008733	znf646	99	35.703	Oryzias_latipes_hsok
ENSTNIG00000001159	si:dkey-89b17.4	99	37.387	ENSOMEG00000015658	znf646	99	43.786	Oryzias_melastigma
ENSTNIG00000001159	si:dkey-89b17.4	99	50.000	ENSOMEG00000020587	si:dkey-89b17.4	99	55.873	Oryzias_melastigma
ENSTNIG00000001159	si:dkey-89b17.4	99	40.984	ENSPMGG00000015931	-	92	40.984	Periophthalmus_magnuspinnatus
ENSTNIG00000001159	si:dkey-89b17.4	100	58.929	ENSPMGG00000004639	znf646	97	58.929	Periophthalmus_magnuspinnatus
ENSTNIG00000001159	si:dkey-89b17.4	100	53.448	ENSPFOG00000008241	si:dkey-89b17.4	99	54.902	Poecilia_formosa
ENSTNIG00000001159	si:dkey-89b17.4	99	46.060	ENSPFOG00000004826	-	99	52.094	Poecilia_formosa
ENSTNIG00000001159	si:dkey-89b17.4	99	44.444	ENSPLAG00000010454	-	99	43.968	Poecilia_latipinna
ENSTNIG00000001159	si:dkey-89b17.4	100	53.448	ENSPLAG00000011382	si:dkey-89b17.4	97	42.547	Poecilia_latipinna
ENSTNIG00000001159	si:dkey-89b17.4	100	53.448	ENSPMEG00000000141	si:dkey-89b17.4	97	42.547	Poecilia_mexicana
ENSTNIG00000001159	si:dkey-89b17.4	99	43.140	ENSPMEG00000018283	znf646	97	43.016	Poecilia_mexicana
ENSTNIG00000001159	si:dkey-89b17.4	99	36.615	ENSPREG00000017637	znf646	94	39.912	Poecilia_reticulata
ENSTNIG00000001159	si:dkey-89b17.4	100	53.448	ENSPREG00000012579	si:dkey-89b17.4	97	42.276	Poecilia_reticulata
ENSTNIG00000001159	si:dkey-89b17.4	99	53.448	ENSPNYG00000011901	si:dkey-89b17.4	96	42.778	Pundamilia_nyererei
ENSTNIG00000001159	si:dkey-89b17.4	99	42.280	ENSPNYG00000017692	znf646	99	41.111	Pundamilia_nyererei
ENSTNIG00000001159	si:dkey-89b17.4	99	39.111	ENSPNAG00000022072	si:dkey-89b17.4	98	39.636	Pygocentrus_nattereri
ENSTNIG00000001159	si:dkey-89b17.4	99	69.643	ENSPNAG00000000750	znf646	99	69.643	Pygocentrus_nattereri
ENSTNIG00000001159	si:dkey-89b17.4	99	40.209	ENSSFOG00015004737	si:dkey-89b17.4	98	39.306	Scleropages_formosus
ENSTNIG00000001159	si:dkey-89b17.4	99	37.361	ENSSMAG00000012378	znf646	99	36.156	Scophthalmus_maximus
ENSTNIG00000001159	si:dkey-89b17.4	99	44.176	ENSSDUG00000002675	znf646	98	38.596	Seriola_dumerili
ENSTNIG00000001159	si:dkey-89b17.4	99	41.860	ENSSDUG00000015931	si:dkey-89b17.4	96	43.056	Seriola_dumerili
ENSTNIG00000001159	si:dkey-89b17.4	99	44.176	ENSSLDG00000018521	znf646	98	38.596	Seriola_lalandi_dorsalis
ENSTNIG00000001159	si:dkey-89b17.4	98	41.860	ENSSLDG00000012415	si:dkey-89b17.4	96	43.056	Seriola_lalandi_dorsalis
ENSTNIG00000001159	si:dkey-89b17.4	99	44.239	ENSSPAG00000016701	znf646	99	42.740	Stegastes_partitus
ENSTNIG00000001159	si:dkey-89b17.4	98	55.172	ENSSPAG00000018810	si:dkey-89b17.4	96	43.056	Stegastes_partitus
ENSTNIG00000001159	si:dkey-89b17.4	99	43.838	ENSTRUG00000025597	znf646	99	41.357	Takifugu_rubripes
ENSTNIG00000001159	si:dkey-89b17.4	99	91.228	ENSTRUG00000020495	si:dkey-89b17.4	99	51.798	Takifugu_rubripes
ENSTNIG00000001159	si:dkey-89b17.4	99	42.355	ENSXCOG00000002714	-	96	42.355	Xiphophorus_couchianus
ENSTNIG00000001159	si:dkey-89b17.4	100	53.448	ENSXCOG00000001645	si:dkey-89b17.4	99	54.600	Xiphophorus_couchianus
ENSTNIG00000001159	si:dkey-89b17.4	100	53.448	ENSXMAG00000024528	si:dkey-89b17.4	99	54.751	Xiphophorus_maculatus
ENSTNIG00000001159	si:dkey-89b17.4	99	41.652	ENSXMAG00000018743	-	96	41.652	Xiphophorus_maculatus