EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000001224 (Gene tree)
Gene ID: -
Gene Symbol: snrpd1
Alias: CHUNP6882|fk26a01|wu:fk26a01|zgc:86929
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 773 bases
Position: chr21:1894663-1895435
Accession: ZDB-GENE-020419-14
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000004089	LSM	PF01423.22	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000002655	-	315	-	ENSTNIP00000004089	104 (aa)	-	H3C768

Gene Model

Click here to download ENSTNIG00000001224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000001224's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000001224	snrpd1	92	91.667	ENSG00000167088	SNRPD1	91	94.118	Homo_sapiens
ENSTNIG00000001224	snrpd1	99	96.117	ENSAPOG00000019446	snrpd1	56	96.117	Acanthochromis_polyacanthus
ENSTNIG00000001224	snrpd1	92	91.667	ENSAMEG00000002576	SNRPD1	82	91.667	Ailuropoda_melanoleuca
ENSTNIG00000001224	snrpd1	99	96.117	ENSACIG00000011263	snrpd1	92	96.117	Amphilophus_citrinellus
ENSTNIG00000001224	snrpd1	99	96.117	ENSAOCG00000007406	snrpd1	87	96.117	Amphiprion_ocellaris
ENSTNIG00000001224	snrpd1	99	96.117	ENSAPEG00000012539	SNRPD1	92	96.117	Amphiprion_percula
ENSTNIG00000001224	snrpd1	90	97.872	ENSAPEG00000014961	snrpd1	82	97.872	Amphiprion_percula
ENSTNIG00000001224	snrpd1	99	96.117	ENSATEG00000014399	snrpd1	92	96.117	Anabas_testudineus
ENSTNIG00000001224	snrpd1	92	91.667	ENSAPLG00000012256	SNRPD1	81	91.667	Anas_platyrhynchos
ENSTNIG00000001224	snrpd1	92	91.667	ENSACAG00000006364	SNRPD1	81	91.667	Anolis_carolinensis
ENSTNIG00000001224	snrpd1	92	91.667	ENSANAG00000025641	SNRPD1	81	91.667	Aotus_nancymaae
ENSTNIG00000001224	snrpd1	99	96.117	ENSACLG00000017406	snrpd1	92	96.117	Astatotilapia_calliptera
ENSTNIG00000001224	snrpd1	92	94.792	ENSAMXG00000004589	snrpd1	81	94.792	Astyanax_mexicanus
ENSTNIG00000001224	snrpd1	77	88.750	ENSBTAG00000012376	-	60	88.750	Bos_taurus
ENSTNIG00000001224	snrpd1	92	91.667	ENSBTAG00000008292	SNRPD1	81	91.667	Bos_taurus
ENSTNIG00000001224	snrpd1	77	87.500	ENSBTAG00000055316	-	69	87.500	Bos_taurus
ENSTNIG00000001224	snrpd1	92	89.583	ENSBTAG00000047266	-	81	89.583	Bos_taurus
ENSTNIG00000001224	snrpd1	67	70.000	WBGene00004916	snr-3	67	66.154	Caenorhabditis_elegans
ENSTNIG00000001224	snrpd1	92	91.667	ENSCJAG00000042955	SNRPD1	81	91.667	Callithrix_jacchus
ENSTNIG00000001224	snrpd1	92	91.667	ENSCAFG00000018247	SNRPD1	81	91.667	Canis_familiaris
ENSTNIG00000001224	snrpd1	76	89.873	ENSCAFG00020015914	SNRPD1	62	89.873	Canis_lupus_dingo
ENSTNIG00000001224	snrpd1	92	91.667	ENSCHIG00000005557	SNRPD1	81	91.667	Capra_hircus
ENSTNIG00000001224	snrpd1	92	91.667	ENSTSYG00000030028	SNRPD1	81	91.667	Carlito_syrichta
ENSTNIG00000001224	snrpd1	92	91.667	ENSCAPG00000008103	SNRPD1	83	91.667	Cavia_aperea
ENSTNIG00000001224	snrpd1	92	91.667	ENSCPOG00000004679	SNRPD1	83	91.667	Cavia_porcellus
ENSTNIG00000001224	snrpd1	92	88.542	ENSCCAG00000016652	-	81	88.542	Cebus_capucinus
ENSTNIG00000001224	snrpd1	77	86.250	ENSCCAG00000005390	-	67	86.250	Cebus_capucinus
ENSTNIG00000001224	snrpd1	92	91.667	ENSCCAG00000020611	-	81	91.667	Cebus_capucinus
ENSTNIG00000001224	snrpd1	92	91.667	ENSCCAG00000032658	SNRPD1	81	91.667	Cebus_capucinus
ENSTNIG00000001224	snrpd1	92	91.667	ENSCATG00000039978	SNRPD1	81	91.667	Cercocebus_atys
ENSTNIG00000001224	snrpd1	92	91.667	ENSCLAG00000008691	SNRPD1	81	91.667	Chinchilla_lanigera
ENSTNIG00000001224	snrpd1	92	91.667	ENSCSAG00000017654	SNRPD1	81	91.667	Chlorocebus_sabaeus
ENSTNIG00000001224	snrpd1	92	91.667	ENSCPBG00000023143	SNRPD1	81	91.667	Chrysemys_picta_bellii
ENSTNIG00000001224	snrpd1	67	77.143	ENSCING00000024100	-	56	77.143	Ciona_intestinalis
ENSTNIG00000001224	snrpd1	68	76.056	ENSCSAVG00000004578	-	57	76.056	Ciona_savignyi
ENSTNIG00000001224	snrpd1	77	67.500	ENSCGRG00001009945	-	68	67.500	Cricetulus_griseus_chok1gshd
ENSTNIG00000001224	snrpd1	92	91.667	ENSCGRG00001021055	-	81	91.667	Cricetulus_griseus_chok1gshd
ENSTNIG00000001224	snrpd1	77	67.500	ENSCGRG00000006224	-	68	67.500	Cricetulus_griseus_crigri
ENSTNIG00000001224	snrpd1	92	91.667	ENSCGRG00000000490	-	81	91.667	Cricetulus_griseus_crigri
ENSTNIG00000001224	snrpd1	76	94.937	ENSCSEG00000018141	snrpd1	67	95.000	Cynoglossus_semilaevis
ENSTNIG00000001224	snrpd1	99	96.117	ENSCVAG00000000534	snrpd1	87	96.117	Cyprinodon_variegatus
ENSTNIG00000001224	snrpd1	92	94.792	ENSDARG00000011648	snrpd1	81	94.792	Danio_rerio
ENSTNIG00000001224	snrpd1	92	91.667	ENSDNOG00000040310	SNRPD1	81	91.667	Dasypus_novemcinctus
ENSTNIG00000001224	snrpd1	92	91.667	ENSDORG00000008349	Snrpd1	81	91.667	Dipodomys_ordii
ENSTNIG00000001224	snrpd1	75	71.795	FBgn0261933	SmD1	63	71.795	Drosophila_melanogaster
ENSTNIG00000001224	snrpd1	78	95.062	ENSETEG00000011689	SNRPD1	68	95.062	Echinops_telfairi
ENSTNIG00000001224	snrpd1	92	87.500	ENSEBUG00000003170	snrpd1	81	87.500	Eptatretus_burgeri
ENSTNIG00000001224	snrpd1	92	91.667	ENSEASG00005002433	SNRPD1	86	91.667	Equus_asinus_asinus
ENSTNIG00000001224	snrpd1	92	91.667	ENSECAG00000014373	SNRPD1	86	91.667	Equus_caballus
ENSTNIG00000001224	snrpd1	75	89.744	ENSEEUG00000004987	SNRPD1	88	89.744	Erinaceus_europaeus
ENSTNIG00000001224	snrpd1	91	81.053	ENSELUG00000000088	snrpd1	66	92.308	Esox_lucius
ENSTNIG00000001224	snrpd1	92	91.667	ENSFCAG00000012352	SNRPD1	81	91.667	Felis_catus
ENSTNIG00000001224	snrpd1	92	91.667	ENSFALG00000002646	SNRPD1	86	91.667	Ficedula_albicollis
ENSTNIG00000001224	snrpd1	92	94.792	ENSGMOG00000015607	snrpd1	81	94.792	Gadus_morhua
ENSTNIG00000001224	snrpd1	92	91.667	ENSGALG00000041334	SNRPD1	81	91.667	Gallus_gallus
ENSTNIG00000001224	snrpd1	99	96.117	ENSGAFG00000011171	snrpd1	87	96.117	Gambusia_affinis
ENSTNIG00000001224	snrpd1	92	94.792	ENSGACG00000005201	SNRPD1	81	94.792	Gasterosteus_aculeatus
ENSTNIG00000001224	snrpd1	92	91.667	ENSGAGG00000011197	SNRPD1	81	91.667	Gopherus_agassizii
ENSTNIG00000001224	snrpd1	92	91.667	ENSGGOG00000041053	SNRPD1	81	91.667	Gorilla_gorilla
ENSTNIG00000001224	snrpd1	77	86.250	ENSGGOG00000026706	-	67	86.250	Gorilla_gorilla
ENSTNIG00000001224	snrpd1	99	96.117	ENSHBUG00000003236	snrpd1	87	96.117	Haplochromis_burtoni
ENSTNIG00000001224	snrpd1	92	91.667	ENSHGLG00000007152	SNRPD1	81	91.667	Heterocephalus_glaber_female
ENSTNIG00000001224	snrpd1	92	91.667	ENSHGLG00100008618	SNRPD1	81	91.667	Heterocephalus_glaber_male
ENSTNIG00000001224	snrpd1	99	96.117	ENSIPUG00000003576	snrpd1	87	96.117	Ictalurus_punctatus
ENSTNIG00000001224	snrpd1	92	91.667	ENSSTOG00000000485	SNRPD1	81	91.667	Ictidomys_tridecemlineatus
ENSTNIG00000001224	snrpd1	92	91.667	ENSJJAG00000017698	Snrpd1	81	91.667	Jaculus_jaculus
ENSTNIG00000001224	snrpd1	99	96.117	ENSKMAG00000005987	snrpd1	87	96.117	Kryptolebias_marmoratus
ENSTNIG00000001224	snrpd1	99	96.117	ENSLBEG00000003327	snrpd1	87	96.117	Labrus_bergylta
ENSTNIG00000001224	snrpd1	92	91.667	ENSLACG00000001955	SNRPD1	81	91.667	Latimeria_chalumnae
ENSTNIG00000001224	snrpd1	92	91.667	ENSLOCG00000002003	snrpd1	82	91.667	Lepisosteus_oculatus
ENSTNIG00000001224	snrpd1	92	91.667	ENSLAFG00000005819	SNRPD1	81	91.667	Loxodonta_africana
ENSTNIG00000001224	snrpd1	92	91.667	ENSMFAG00000042080	SNRPD1	81	91.667	Macaca_fascicularis
ENSTNIG00000001224	snrpd1	92	91.667	ENSMMUG00000003992	SNRPD1	82	91.667	Macaca_mulatta
ENSTNIG00000001224	snrpd1	92	91.667	ENSMNEG00000041296	SNRPD1	81	91.667	Macaca_nemestrina
ENSTNIG00000001224	snrpd1	92	91.667	ENSMLEG00000028659	SNRPD1	81	91.667	Mandrillus_leucophaeus
ENSTNIG00000001224	snrpd1	99	96.117	ENSMAMG00000012971	snrpd1	87	96.117	Mastacembelus_armatus
ENSTNIG00000001224	snrpd1	99	96.117	ENSMZEG00005004685	snrpd1	87	96.117	Maylandia_zebra
ENSTNIG00000001224	snrpd1	92	91.667	ENSMGAG00000011598	SNRPD1	79	91.667	Meleagris_gallopavo
ENSTNIG00000001224	snrpd1	74	80.519	ENSMAUG00000016502	-	69	80.519	Mesocricetus_auratus
ENSTNIG00000001224	snrpd1	74	80.519	ENSMAUG00000016467	-	69	80.519	Mesocricetus_auratus
ENSTNIG00000001224	snrpd1	82	84.706	ENSMAUG00000006829	-	51	89.744	Mesocricetus_auratus
ENSTNIG00000001224	snrpd1	92	91.667	ENSMICG00000044066	SNRPD1	81	91.667	Microcebus_murinus
ENSTNIG00000001224	snrpd1	92	91.667	ENSMOCG00000017367	Snrpd1	81	91.667	Microtus_ochrogaster
ENSTNIG00000001224	snrpd1	99	96.117	ENSMMOG00000019089	snrpd1	87	96.117	Mola_mola
ENSTNIG00000001224	snrpd1	92	91.667	ENSMODG00000021487	SNRPD1	83	91.667	Monodelphis_domestica
ENSTNIG00000001224	snrpd1	99	96.117	ENSMALG00000014459	snrpd1	87	96.117	Monopterus_albus
ENSTNIG00000001224	snrpd1	92	91.667	MGP_CAROLIEiJ_G0021994	Snrpd1	81	91.667	Mus_caroli
ENSTNIG00000001224	snrpd1	92	91.667	ENSMUSG00000002477	Snrpd1	81	91.667	Mus_musculus
ENSTNIG00000001224	snrpd1	92	91.667	MGP_PahariEiJ_G0018731	Snrpd1	81	91.667	Mus_pahari
ENSTNIG00000001224	snrpd1	92	91.667	MGP_SPRETEiJ_G0022910	Snrpd1	81	91.667	Mus_spretus
ENSTNIG00000001224	snrpd1	92	91.667	ENSMPUG00000005567	-	82	91.667	Mustela_putorius_furo
ENSTNIG00000001224	snrpd1	92	90.625	ENSMPUG00000020041	-	81	90.625	Mustela_putorius_furo
ENSTNIG00000001224	snrpd1	77	90.000	ENSMLUG00000009124	SNRPD1	62	90.000	Myotis_lucifugus
ENSTNIG00000001224	snrpd1	92	91.667	ENSNGAG00000023946	Snrpd1	81	91.667	Nannospalax_galili
ENSTNIG00000001224	snrpd1	75	94.872	ENSNBRG00000012119	snrpd1	64	94.872	Neolamprologus_brichardi
ENSTNIG00000001224	snrpd1	92	89.583	ENSNLEG00000031430	SNRPD1	80	89.583	Nomascus_leucogenys
ENSTNIG00000001224	snrpd1	92	91.667	ENSODEG00000005764	SNRPD1	81	91.667	Octodon_degus
ENSTNIG00000001224	snrpd1	99	96.117	ENSONIG00000002486	snrpd1	87	96.117	Oreochromis_niloticus
ENSTNIG00000001224	snrpd1	83	81.395	ENSOANG00000004638	-	72	81.395	Ornithorhynchus_anatinus
ENSTNIG00000001224	snrpd1	92	91.667	ENSOCUG00000023761	-	82	91.667	Oryctolagus_cuniculus
ENSTNIG00000001224	snrpd1	92	90.625	ENSOCUG00000014399	-	81	90.625	Oryctolagus_cuniculus
ENSTNIG00000001224	snrpd1	99	96.117	ENSORLG00000012516	snrpd1	92	96.117	Oryzias_latipes
ENSTNIG00000001224	snrpd1	99	96.117	ENSORLG00020005743	snrpd1	87	96.117	Oryzias_latipes_hni
ENSTNIG00000001224	snrpd1	99	96.117	ENSORLG00015013402	snrpd1	87	96.117	Oryzias_latipes_hsok
ENSTNIG00000001224	snrpd1	99	96.117	ENSOMEG00000011571	snrpd1	87	96.117	Oryzias_melastigma
ENSTNIG00000001224	snrpd1	92	91.667	ENSOGAG00000007833	SNRPD1	81	91.667	Otolemur_garnettii
ENSTNIG00000001224	snrpd1	77	90.000	ENSOARG00000003413	-	60	90.000	Ovis_aries
ENSTNIG00000001224	snrpd1	92	91.667	ENSPPAG00000042593	SNRPD1	81	91.667	Pan_paniscus
ENSTNIG00000001224	snrpd1	92	91.667	ENSPPRG00000002399	SNRPD1	81	91.667	Panthera_pardus
ENSTNIG00000001224	snrpd1	92	63.542	ENSPPRG00000005009	-	75	63.542	Panthera_pardus
ENSTNIG00000001224	snrpd1	92	91.667	ENSPTIG00000013206	SNRPD1	84	91.667	Panthera_tigris_altaica
ENSTNIG00000001224	snrpd1	81	86.905	ENSPTRG00000050159	-	72	86.905	Pan_troglodytes
ENSTNIG00000001224	snrpd1	92	91.667	ENSPTRG00000009909	SNRPD1	81	91.667	Pan_troglodytes
ENSTNIG00000001224	snrpd1	92	91.667	ENSPANG00000023478	SNRPD1	81	91.667	Papio_anubis
ENSTNIG00000001224	snrpd1	92	93.750	ENSPKIG00000003985	SNRPD1	81	93.750	Paramormyrops_kingsleyae
ENSTNIG00000001224	snrpd1	92	94.792	ENSPKIG00000021610	snrpd1	86	94.792	Paramormyrops_kingsleyae
ENSTNIG00000001224	snrpd1	99	96.117	ENSPMGG00000001862	snrpd1	87	96.117	Periophthalmus_magnuspinnatus
ENSTNIG00000001224	snrpd1	92	91.667	ENSPEMG00000014773	-	81	91.667	Peromyscus_maniculatus_bairdii
ENSTNIG00000001224	snrpd1	83	76.136	ENSPMAG00000003938	-	72	76.136	Petromyzon_marinus
ENSTNIG00000001224	snrpd1	92	91.667	ENSPCIG00000020320	SNRPD1	86	91.667	Phascolarctos_cinereus
ENSTNIG00000001224	snrpd1	77	95.000	ENSPFOG00000012448	SNRPD1	71	95.000	Poecilia_formosa
ENSTNIG00000001224	snrpd1	77	95.000	ENSPLAG00000006738	snrpd1	71	95.000	Poecilia_latipinna
ENSTNIG00000001224	snrpd1	77	95.000	ENSPMEG00000021942	snrpd1	71	95.000	Poecilia_mexicana
ENSTNIG00000001224	snrpd1	99	96.117	ENSPREG00000007094	snrpd1	87	96.117	Poecilia_reticulata
ENSTNIG00000001224	snrpd1	92	91.667	ENSPPYG00000025874	SNRPD1	81	91.667	Pongo_abelii
ENSTNIG00000001224	snrpd1	92	91.667	ENSPCOG00000013327	SNRPD1	81	91.667	Propithecus_coquereli
ENSTNIG00000001224	snrpd1	92	91.667	ENSPVAG00000005511	SNRPD1	64	91.667	Pteropus_vampyrus
ENSTNIG00000001224	snrpd1	92	93.750	ENSPNAG00000017824	snrpd1	81	93.750	Pygocentrus_nattereri
ENSTNIG00000001224	snrpd1	92	91.667	ENSRNOG00000013714	Snrpd1	81	91.667	Rattus_norvegicus
ENSTNIG00000001224	snrpd1	92	91.667	ENSRBIG00000022996	SNRPD1	81	91.667	Rhinopithecus_bieti
ENSTNIG00000001224	snrpd1	92	91.667	ENSRROG00000027640	SNRPD1	81	91.667	Rhinopithecus_roxellana
ENSTNIG00000001224	snrpd1	92	91.667	ENSSBOG00000020998	SNRPD1	81	91.667	Saimiri_boliviensis_boliviensis
ENSTNIG00000001224	snrpd1	92	91.667	ENSSHAG00000011791	SNRPD1	81	91.667	Sarcophilus_harrisii
ENSTNIG00000001224	snrpd1	92	94.792	ENSSFOG00015022253	-	81	94.792	Scleropages_formosus
ENSTNIG00000001224	snrpd1	92	94.792	ENSSFOG00015008809	-	81	94.792	Scleropages_formosus
ENSTNIG00000001224	snrpd1	92	94.792	ENSSMAG00000008765	snrpd1	86	94.792	Scophthalmus_maximus
ENSTNIG00000001224	snrpd1	99	96.117	ENSSDUG00000010521	snrpd1	87	96.117	Seriola_dumerili
ENSTNIG00000001224	snrpd1	99	96.117	ENSSLDG00000011858	snrpd1	87	96.117	Seriola_lalandi_dorsalis
ENSTNIG00000001224	snrpd1	54	89.286	ENSSARG00000004271	SNRPD1	84	89.286	Sorex_araneus
ENSTNIG00000001224	snrpd1	92	91.667	ENSSPUG00000002824	SNRPD1	81	91.667	Sphenodon_punctatus
ENSTNIG00000001224	snrpd1	99	96.117	ENSSPAG00000015229	snrpd1	92	96.117	Stegastes_partitus
ENSTNIG00000001224	snrpd1	92	91.667	ENSSSCG00000003701	SNRPD1	86	91.667	Sus_scrofa
ENSTNIG00000001224	snrpd1	92	91.667	ENSTGUG00000005095	SNRPD1	81	91.667	Taeniopygia_guttata
ENSTNIG00000001224	snrpd1	92	93.750	ENSTRUG00000008977	snrpd1	86	93.750	Takifugu_rubripes
ENSTNIG00000001224	snrpd1	78	95.062	ENSTBEG00000013776	SNRPD1	92	95.062	Tupaia_belangeri
ENSTNIG00000001224	snrpd1	92	91.667	ENSTTRG00000002654	SNRPD1	83	91.667	Tursiops_truncatus
ENSTNIG00000001224	snrpd1	92	91.667	ENSUAMG00000013431	SNRPD1	84	89.744	Ursus_americanus
ENSTNIG00000001224	snrpd1	92	91.667	ENSUMAG00000019740	SNRPD1	81	91.667	Ursus_maritimus
ENSTNIG00000001224	snrpd1	92	91.667	ENSVPAG00000010056	SNRPD1	64	91.667	Vicugna_pacos
ENSTNIG00000001224	snrpd1	92	91.667	ENSVVUG00000004009	SNRPD1	86	91.667	Vulpes_vulpes
ENSTNIG00000001224	snrpd1	92	90.625	ENSXETG00000027354	snrpd1	81	90.625	Xenopus_tropicalis
ENSTNIG00000001224	snrpd1	99	96.117	ENSXCOG00000020108	snrpd1	87	96.117	Xiphophorus_couchianus
ENSTNIG00000001224	snrpd1	99	96.117	ENSXMAG00000003368	snrpd1	87	96.117	Xiphophorus_maculatus