EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000001257 (Gene tree)
Gene ID: -
Gene Symbol: sall3a
Alias: sall3
Full Name: spalt-like transcription factor 3a
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 9928 bases
Position: chr8:2525763-2535690
Accession: ZDB-GENE-020228-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000002946	zf-C2H2	PF00096.26	7e-15	1	3
ENSTNIP00000002946	zf-C2H2	PF00096.26	7e-15	2	3
ENSTNIP00000002946	zf-C2H2	PF00096.26	7e-15	3	3
ENSTNIP00000002946	zf-met	PF12874.7	4.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000000371	-	3120	-	ENSTNIP00000002946	1040 (aa)	-	H3C3X7

Gene Model

Click here to download ENSTNIG00000001257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000001257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000001257	sall3a	95	65.306	ENSTNIG00000004257	sall1a	57	65.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000001257	sall3a	71	66.250	ENSG00000256463	SALL3	82	65.306	Homo_sapiens
ENSTNIG00000001257	sall3a	99	65.306	ENSAPOG00000004264	sall3b	86	65.306	Acanthochromis_polyacanthus
ENSTNIG00000001257	sall3a	98	81.238	ENSAPOG00000020922	sall3a	58	84.720	Acanthochromis_polyacanthus
ENSTNIG00000001257	sall3a	94	65.306	ENSAMEG00000010206	SALL3	83	65.306	Ailuropoda_melanoleuca
ENSTNIG00000001257	sall3a	72	65.306	ENSACIG00000019407	sall3b	85	65.306	Amphilophus_citrinellus
ENSTNIG00000001257	sall3a	71	88.732	ENSACIG00000014041	sall3a	81	88.732	Amphilophus_citrinellus
ENSTNIG00000001257	sall3a	98	80.310	ENSAOCG00000010863	sall3a	79	91.667	Amphiprion_ocellaris
ENSTNIG00000001257	sall3a	99	65.306	ENSAOCG00000012779	sall3b	88	65.306	Amphiprion_ocellaris
ENSTNIG00000001257	sall3a	100	82.644	ENSAPEG00000019278	sall3a	59	85.310	Amphiprion_percula
ENSTNIG00000001257	sall3a	71	65.306	ENSAPEG00000018170	sall3b	84	65.306	Amphiprion_percula
ENSTNIG00000001257	sall3a	63	65.306	ENSATEG00000004914	sall3b	88	65.306	Anabas_testudineus
ENSTNIG00000001257	sall3a	100	81.761	ENSATEG00000024524	sall3a	76	94.872	Anabas_testudineus
ENSTNIG00000001257	sall3a	98	65.306	ENSAPLG00000013214	SALL3	86	65.306	Anas_platyrhynchos
ENSTNIG00000001257	sall3a	100	65.306	ENSACAG00000000478	SALL3	87	65.306	Anolis_carolinensis
ENSTNIG00000001257	sall3a	100	63.265	ENSANAG00000032412	SALL3	86	63.265	Aotus_nancymaae
ENSTNIG00000001257	sall3a	100	80.773	ENSACLG00000022451	sall3a	87	79.892	Astatotilapia_calliptera
ENSTNIG00000001257	sall3a	100	65.306	ENSACLG00000001619	sall3b	86	65.306	Astatotilapia_calliptera
ENSTNIG00000001257	sall3a	99	69.155	ENSAMXG00000011185	sall3a	80	83.824	Astyanax_mexicanus
ENSTNIG00000001257	sall3a	97	65.306	ENSBTAG00000050200	SALL3	83	65.306	Bos_taurus
ENSTNIG00000001257	sall3a	82	65.306	ENSCJAG00000007332	SALL3	57	65.306	Callithrix_jacchus
ENSTNIG00000001257	sall3a	84	65.306	ENSCAFG00000000013	SALL3	83	65.306	Canis_familiaris
ENSTNIG00000001257	sall3a	80	65.306	ENSCAFG00020015092	SALL3	80	65.306	Canis_lupus_dingo
ENSTNIG00000001257	sall3a	97	65.306	ENSCHIG00000000145	SALL3	83	65.306	Capra_hircus
ENSTNIG00000001257	sall3a	68	65.306	ENSTSYG00000028846	SALL3	81	65.306	Carlito_syrichta
ENSTNIG00000001257	sall3a	79	68.182	ENSCAPG00000006496	SALL3	80	68.478	Cavia_aperea
ENSTNIG00000001257	sall3a	98	61.538	ENSCPOG00000008546	SALL3	88	61.538	Cavia_porcellus
ENSTNIG00000001257	sall3a	100	65.306	ENSCCAG00000034863	SALL3	57	65.522	Cebus_capucinus
ENSTNIG00000001257	sall3a	72	66.279	ENSCATG00000029727	SALL3	81	66.279	Cercocebus_atys
ENSTNIG00000001257	sall3a	66	65.242	ENSCLAG00000007727	SALL3	88	61.538	Chinchilla_lanigera
ENSTNIG00000001257	sall3a	62	66.058	ENSCSAG00000018244	SALL3	55	65.773	Chlorocebus_sabaeus
ENSTNIG00000001257	sall3a	57	66.393	ENSCHOG00000013939	-	68	66.393	Choloepus_hoffmanni
ENSTNIG00000001257	sall3a	98	65.306	ENSCPBG00000003657	SALL3	85	65.306	Chrysemys_picta_bellii
ENSTNIG00000001257	sall3a	68	73.684	ENSCANG00000030302	SALL3	84	73.684	Colobus_angolensis_palliatus
ENSTNIG00000001257	sall3a	99	65.306	ENSCGRG00001018203	Sall3	88	61.538	Cricetulus_griseus_chok1gshd
ENSTNIG00000001257	sall3a	98	57.692	ENSCGRG00000017127	Sall3	88	57.692	Cricetulus_griseus_crigri
ENSTNIG00000001257	sall3a	66	65.000	ENSCSEG00000009569	sall3b	79	65.306	Cynoglossus_semilaevis
ENSTNIG00000001257	sall3a	78	82.044	ENSCVAG00000009684	sall3a	80	81.645	Cyprinodon_variegatus
ENSTNIG00000001257	sall3a	94	65.909	ENSCVAG00000017005	sall3b	80	61.538	Cyprinodon_variegatus
ENSTNIG00000001257	sall3a	98	63.265	ENSDARG00000057586	sall3b	86	63.265	Danio_rerio
ENSTNIG00000001257	sall3a	100	65.306	ENSDARG00000079613	sall3a	87	65.306	Danio_rerio
ENSTNIG00000001257	sall3a	61	65.306	ENSDNOG00000025483	SALL3	76	63.407	Dasypus_novemcinctus
ENSTNIG00000001257	sall3a	61	65.319	ENSDORG00000002702	Sall3	67	65.610	Dipodomys_ordii
ENSTNIG00000001257	sall3a	63	61.538	ENSETEG00000001481	SALL3	76	62.421	Echinops_telfairi
ENSTNIG00000001257	sall3a	100	61.538	ENSEASG00005002071	SALL3	88	61.538	Equus_asinus_asinus
ENSTNIG00000001257	sall3a	100	61.538	ENSECAG00000015414	SALL3	88	61.538	Equus_caballus
ENSTNIG00000001257	sall3a	100	70.027	ENSELUG00000020351	sall3a	59	74.665	Esox_lucius
ENSTNIG00000001257	sall3a	99	61.538	ENSELUG00000009541	sall3b	56	61.538	Esox_lucius
ENSTNIG00000001257	sall3a	100	65.306	ENSFCAG00000028839	SALL3	89	65.306	Felis_catus
ENSTNIG00000001257	sall3a	100	65.306	ENSFALG00000013343	SALL3	86	65.306	Ficedula_albicollis
ENSTNIG00000001257	sall3a	66	64.080	ENSFDAG00000014697	SALL3	88	61.538	Fukomys_damarensis
ENSTNIG00000001257	sall3a	98	75.640	ENSGMOG00000006649	sall3a	87	75.522	Gadus_morhua
ENSTNIG00000001257	sall3a	100	65.306	ENSGALG00000041404	SALL3	87	65.306	Gallus_gallus
ENSTNIG00000001257	sall3a	100	63.265	ENSGAFG00000014435	-	60	63.265	Gambusia_affinis
ENSTNIG00000001257	sall3a	98	76.254	ENSGAFG00000001581	sall3a	80	87.500	Gambusia_affinis
ENSTNIG00000001257	sall3a	98	79.183	ENSGACG00000005503	sall3a	84	79.290	Gasterosteus_aculeatus
ENSTNIG00000001257	sall3a	99	61.538	ENSGACG00000002533	sall3b	57	61.538	Gasterosteus_aculeatus
ENSTNIG00000001257	sall3a	100	65.306	ENSGAGG00000000925	SALL3	86	65.306	Gopherus_agassizii
ENSTNIG00000001257	sall3a	72	66.279	ENSGGOG00000008127	SALL3	82	66.279	Gorilla_gorilla
ENSTNIG00000001257	sall3a	100	80.683	ENSHBUG00000004486	sall3a	59	83.984	Haplochromis_burtoni
ENSTNIG00000001257	sall3a	72	65.306	ENSHBUG00000018127	sall3b	85	65.306	Haplochromis_burtoni
ENSTNIG00000001257	sall3a	100	61.538	ENSHGLG00000000824	SALL3	88	61.538	Heterocephalus_glaber_female
ENSTNIG00000001257	sall3a	100	61.538	ENSHGLG00100008694	SALL3	60	65.075	Heterocephalus_glaber_male
ENSTNIG00000001257	sall3a	91	78.191	ENSHCOG00000010423	sall3a	82	88.889	Hippocampus_comes
ENSTNIG00000001257	sall3a	85	57.143	ENSHCOG00000004745	sall3b	50	56.140	Hippocampus_comes
ENSTNIG00000001257	sall3a	99	68.336	ENSIPUG00000003378	sall3	87	66.934	Ictalurus_punctatus
ENSTNIG00000001257	sall3a	100	61.538	ENSSTOG00000004145	SALL3	88	61.538	Ictidomys_tridecemlineatus
ENSTNIG00000001257	sall3a	97	65.306	ENSJJAG00000014351	Sall3	85	61.538	Jaculus_jaculus
ENSTNIG00000001257	sall3a	100	79.964	ENSKMAG00000003846	sall3a	81	91.803	Kryptolebias_marmoratus
ENSTNIG00000001257	sall3a	62	63.265	ENSKMAG00000012418	sall3b	86	63.265	Kryptolebias_marmoratus
ENSTNIG00000001257	sall3a	100	79.874	ENSLBEG00000005152	sall3a	59	83.871	Labrus_bergylta
ENSTNIG00000001257	sall3a	73	65.306	ENSLBEG00000015706	sall3b	83	65.306	Labrus_bergylta
ENSTNIG00000001257	sall3a	100	66.147	ENSLOCG00000007831	sall3a	87	65.409	Lepisosteus_oculatus
ENSTNIG00000001257	sall3a	95	65.306	ENSLAFG00000013521	SALL3	84	65.306	Loxodonta_africana
ENSTNIG00000001257	sall3a	65	65.306	ENSMFAG00000031402	SALL3	59	65.457	Macaca_fascicularis
ENSTNIG00000001257	sall3a	65	65.306	ENSMMUG00000000286	SALL3	57	65.306	Macaca_mulatta
ENSTNIG00000001257	sall3a	98	76.055	ENSMAMG00000001276	sall3a	62	77.147	Mastacembelus_armatus
ENSTNIG00000001257	sall3a	71	65.306	ENSMAMG00000006101	sall3b	84	65.306	Mastacembelus_armatus
ENSTNIG00000001257	sall3a	100	65.306	ENSMZEG00005026224	sall3b	89	65.306	Maylandia_zebra
ENSTNIG00000001257	sall3a	100	80.773	ENSMZEG00005007586	sall3a	87	79.892	Maylandia_zebra
ENSTNIG00000001257	sall3a	100	65.306	ENSMGAG00000002297	SALL3	86	65.306	Meleagris_gallopavo
ENSTNIG00000001257	sall3a	100	65.306	ENSMAUG00000011828	Sall3	59	65.727	Mesocricetus_auratus
ENSTNIG00000001257	sall3a	83	61.538	ENSMICG00000017395	SALL3	84	63.166	Microcebus_murinus
ENSTNIG00000001257	sall3a	100	65.306	ENSMOCG00000013205	Sall3	59	66.320	Microtus_ochrogaster
ENSTNIG00000001257	sall3a	72	57.895	ENSMMOG00000014246	sall3b	85	57.895	Mola_mola
ENSTNIG00000001257	sall3a	70	91.176	ENSMMOG00000003253	sall3a	81	91.176	Mola_mola
ENSTNIG00000001257	sall3a	100	65.306	ENSMODG00000012231	SALL3	86	65.306	Monodelphis_domestica
ENSTNIG00000001257	sall3a	97	81.315	ENSMALG00000003343	sall3a	86	80.433	Monopterus_albus
ENSTNIG00000001257	sall3a	100	65.306	MGP_CAROLIEiJ_G0022442	Sall3	88	61.538	Mus_caroli
ENSTNIG00000001257	sall3a	100	65.306	ENSMUSG00000024565	Sall3	88	61.538	Mus_musculus
ENSTNIG00000001257	sall3a	100	65.306	MGP_PahariEiJ_G0019170	Sall3	88	61.538	Mus_pahari
ENSTNIG00000001257	sall3a	100	65.306	MGP_SPRETEiJ_G0023357	Sall3	88	61.538	Mus_spretus
ENSTNIG00000001257	sall3a	83	65.306	ENSMPUG00000016646	SALL3	87	65.306	Mustela_putorius_furo
ENSTNIG00000001257	sall3a	94	65.306	ENSMLUG00000010582	SALL3	83	65.306	Myotis_lucifugus
ENSTNIG00000001257	sall3a	100	65.306	ENSNGAG00000023772	Sall3	88	61.538	Nannospalax_galili
ENSTNIG00000001257	sall3a	74	65.306	ENSNBRG00000016034	sall3b	85	65.306	Neolamprologus_brichardi
ENSTNIG00000001257	sall3a	97	78.928	ENSNBRG00000008974	sall3a	60	80.811	Neolamprologus_brichardi
ENSTNIG00000001257	sall3a	72	68.182	ENSNLEG00000008217	SALL3	82	68.182	Nomascus_leucogenys
ENSTNIG00000001257	sall3a	80	61.538	ENSODEG00000002692	SALL3	84	61.538	Octodon_degus
ENSTNIG00000001257	sall3a	63	56.140	ENSONIG00000013791	sall3b	89	56.140	Oreochromis_niloticus
ENSTNIG00000001257	sall3a	100	77.172	ENSONIG00000007305	sall3a	86	77.634	Oreochromis_niloticus
ENSTNIG00000001257	sall3a	83	65.306	ENSOCUG00000029398	SALL3	84	65.306	Oryctolagus_cuniculus
ENSTNIG00000001257	sall3a	84	64.103	ENSOCUG00000004364	-	70	61.538	Oryctolagus_cuniculus
ENSTNIG00000001257	sall3a	99	77.968	ENSORLG00000020718	sall3a	59	82.661	Oryzias_latipes
ENSTNIG00000001257	sall3a	97	77.737	ENSORLG00020001794	sall3a	60	81.793	Oryzias_latipes_hni
ENSTNIG00000001257	sall3a	80	63.265	ENSORLG00020015105	sall3b	73	63.265	Oryzias_latipes_hni
ENSTNIG00000001257	sall3a	69	63.265	ENSORLG00015005877	sall3b	95	72.449	Oryzias_latipes_hsok
ENSTNIG00000001257	sall3a	97	77.902	ENSORLG00015018152	sall3a	81	84.375	Oryzias_latipes_hsok
ENSTNIG00000001257	sall3a	99	78.610	ENSOMEG00000011390	sall3a	87	77.187	Oryzias_melastigma
ENSTNIG00000001257	sall3a	97	61.538	ENSOGAG00000031681	SALL3	57	66.038	Otolemur_garnettii
ENSTNIG00000001257	sall3a	71	64.634	ENSOARG00000004353	SALL3	76	60.930	Ovis_aries
ENSTNIG00000001257	sall3a	71	68.182	ENSPPAG00000029586	-	81	68.182	Pan_paniscus
ENSTNIG00000001257	sall3a	72	66.279	ENSPTRG00000010126	SALL3	82	66.279	Pan_troglodytes
ENSTNIG00000001257	sall3a	71	65.306	ENSPANG00000006485	SALL3	81	65.306	Papio_anubis
ENSTNIG00000001257	sall3a	98	65.306	ENSPKIG00000018271	SALL3	80	73.585	Paramormyrops_kingsleyae
ENSTNIG00000001257	sall3a	99	66.513	ENSPKIG00000013427	sall3a	94	66.145	Paramormyrops_kingsleyae
ENSTNIG00000001257	sall3a	98	65.306	ENSPSIG00000008556	SALL3	89	65.306	Pelodiscus_sinensis
ENSTNIG00000001257	sall3a	98	78.737	ENSPMGG00000017042	sall3a	85	78.366	Periophthalmus_magnuspinnatus
ENSTNIG00000001257	sall3a	71	54.530	ENSPMGG00000002913	sall3b	69	60.446	Periophthalmus_magnuspinnatus
ENSTNIG00000001257	sall3a	97	65.306	ENSPEMG00000022799	Sall3	85	61.538	Peromyscus_maniculatus_bairdii
ENSTNIG00000001257	sall3a	100	65.306	ENSPCIG00000002472	SALL3	86	65.306	Phascolarctos_cinereus
ENSTNIG00000001257	sall3a	99	59.615	ENSPFOG00000013292	sall3b	90	59.615	Poecilia_formosa
ENSTNIG00000001257	sall3a	100	79.320	ENSPFOG00000019127	sall3a	59	82.172	Poecilia_formosa
ENSTNIG00000001257	sall3a	99	59.615	ENSPLAG00000013919	sall3b	90	59.615	Poecilia_latipinna
ENSTNIG00000001257	sall3a	100	79.051	ENSPLAG00000018123	sall3a	81	90.000	Poecilia_latipinna
ENSTNIG00000001257	sall3a	66	59.615	ENSPMEG00000023703	sall3b	77	59.615	Poecilia_mexicana
ENSTNIG00000001257	sall3a	100	79.249	ENSPMEG00000014946	sall3a	64	82.306	Poecilia_mexicana
ENSTNIG00000001257	sall3a	100	78.712	ENSPREG00000014420	sall3a	63	81.099	Poecilia_reticulata
ENSTNIG00000001257	sall3a	97	59.615	ENSPREG00000015079	sall3b	57	59.615	Poecilia_reticulata
ENSTNIG00000001257	sall3a	65	65.306	ENSPPYG00000009253	SALL3	59	65.306	Pongo_abelii
ENSTNIG00000001257	sall3a	95	65.306	ENSPCAG00000006522	SALL3	89	65.306	Procavia_capensis
ENSTNIG00000001257	sall3a	72	63.947	ENSPCOG00000012553	SALL3	84	63.596	Propithecus_coquereli
ENSTNIG00000001257	sall3a	94	63.043	ENSPVAG00000014645	SALL3	84	63.043	Pteropus_vampyrus
ENSTNIG00000001257	sall3a	76	65.306	ENSPNYG00000005353	sall3b	85	65.306	Pundamilia_nyererei
ENSTNIG00000001257	sall3a	97	78.928	ENSPNYG00000012783	sall3a	60	80.811	Pundamilia_nyererei
ENSTNIG00000001257	sall3a	99	65.306	ENSPNAG00000017141	sall3b	72	65.306	Pygocentrus_nattereri
ENSTNIG00000001257	sall3a	79	65.306	ENSRNOG00000026116	Sall3	81	61.538	Rattus_norvegicus
ENSTNIG00000001257	sall3a	66	64.580	ENSRBIG00000036190	SALL3	60	64.627	Rhinopithecus_bieti
ENSTNIG00000001257	sall3a	74	65.306	ENSRROG00000034130	SALL3	81	65.306	Rhinopithecus_roxellana
ENSTNIG00000001257	sall3a	68	69.388	ENSSBOG00000023380	SALL3	81	69.388	Saimiri_boliviensis_boliviensis
ENSTNIG00000001257	sall3a	100	65.306	ENSSHAG00000015872	SALL3	86	65.306	Sarcophilus_harrisii
ENSTNIG00000001257	sall3a	96	65.306	ENSSFOG00015012223	sall3a	81	89.130	Scleropages_formosus
ENSTNIG00000001257	sall3a	98	65.306	ENSSFOG00015009159	SALL3	79	78.788	Scleropages_formosus
ENSTNIG00000001257	sall3a	100	80.662	ENSSMAG00000007674	sall3a	84	77.599	Scophthalmus_maximus
ENSTNIG00000001257	sall3a	61	65.306	ENSSMAG00000019762	sall3b	88	65.306	Scophthalmus_maximus
ENSTNIG00000001257	sall3a	100	80.622	ENSSDUG00000011099	sall3a	86	81.648	Seriola_dumerili
ENSTNIG00000001257	sall3a	72	65.306	ENSSDUG00000010584	sall3b	83	65.306	Seriola_dumerili
ENSTNIG00000001257	sall3a	100	65.306	ENSSLDG00000016800	sall3b	60	65.306	Seriola_lalandi_dorsalis
ENSTNIG00000001257	sall3a	100	80.530	ENSSLDG00000012706	sall3a	86	81.648	Seriola_lalandi_dorsalis
ENSTNIG00000001257	sall3a	69	65.306	ENSSPAG00000003172	sall3b	84	65.306	Stegastes_partitus
ENSTNIG00000001257	sall3a	70	92.537	ENSSPAG00000013114	sall3a	81	92.537	Stegastes_partitus
ENSTNIG00000001257	sall3a	97	65.306	ENSSSCG00000004858	SALL3	83	65.306	Sus_scrofa
ENSTNIG00000001257	sall3a	97	71.429	ENSTGUG00000006541	SALL3	86	69.767	Taeniopygia_guttata
ENSTNIG00000001257	sall3a	68	96.429	ENSTRUG00000017423	sall3a	81	96.429	Takifugu_rubripes
ENSTNIG00000001257	sall3a	63	65.306	ENSTTRG00000004958	SALL3	67	65.306	Tursiops_truncatus
ENSTNIG00000001257	sall3a	97	65.306	ENSUAMG00000016908	SALL3	82	69.048	Ursus_americanus
ENSTNIG00000001257	sall3a	74	82.143	ENSVVUG00000018838	SALL3	81	77.419	Vulpes_vulpes
ENSTNIG00000001257	sall3a	99	65.306	ENSXETG00000000845	sall3	86	65.306	Xenopus_tropicalis
ENSTNIG00000001257	sall3a	69	63.265	ENSXCOG00000018799	sall3b	80	63.265	Xiphophorus_couchianus
ENSTNIG00000001257	sall3a	94	79.003	ENSXCOG00000016907	sall3a	53	82.973	Xiphophorus_couchianus
ENSTNIG00000001257	sall3a	100	78.712	ENSXMAG00000023447	sall3a	65	81.477	Xiphophorus_maculatus
ENSTNIG00000001257	sall3a	100	61.702	ENSXMAG00000000798	sall3b	84	63.265	Xiphophorus_maculatus