EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000001280 (Gene tree)
Gene ID: -
Gene Symbol: srsf2a
Alias: SFRS2B|SRP46
Full Name: serine/arginine-rich splicing factor 2a
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2790 bases
Position: chr2:235689-238478
Accession: ZDB-GENE-040426-2706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000003918	RRM_1	PF00076.22	5.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000003608	-	1146	-	ENSTNIP00000003918	225 (aa)	-	H3C6P7
ENSTNIT00000000235	-	641	-	ENSTNIP00000001731	108 (aa)	-	H3C0G5

Gene Model

Click here to download ENSTNIG00000001280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000001280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000001280	srsf2a	60	77.612	ENSG00000161547	SRSF2	86	92.982	Homo_sapiens
ENSTNIG00000001280	srsf2a	56	82.031	ENSAPOG00000008073	srsf2b	53	85.345	Acanthochromis_polyacanthus
ENSTNIG00000001280	srsf2a	60	69.118	ENSAMEG00000013624	-	50	90.909	Ailuropoda_melanoleuca
ENSTNIG00000001280	srsf2a	72	79.755	ENSACIG00000018502	srsf2a	91	85.350	Amphilophus_citrinellus
ENSTNIG00000001280	srsf2a	51	99.123	ENSAOCG00000021878	srsf2a	52	99.123	Amphiprion_ocellaris
ENSTNIG00000001280	srsf2a	56	86.719	ENSAOCG00000022441	-	54	88.793	Amphiprion_ocellaris
ENSTNIG00000001280	srsf2a	56	86.719	ENSAPEG00000006375	-	54	88.793	Amphiprion_percula
ENSTNIG00000001280	srsf2a	51	99.123	ENSAPEG00000023494	srsf2a	52	99.123	Amphiprion_percula
ENSTNIG00000001280	srsf2a	51	92.241	ENSACAG00000008553	-	52	92.241	Anolis_carolinensis
ENSTNIG00000001280	srsf2a	51	97.368	ENSACLG00000027016	srsf2a	50	97.368	Astatotilapia_calliptera
ENSTNIG00000001280	srsf2a	99	60.444	ENSCHOG00000014019	-	53	90.741	Choloepus_hoffmanni
ENSTNIG00000001280	srsf2a	50	98.214	ENSCSEG00000013387	srsf2a	52	98.214	Cynoglossus_semilaevis
ENSTNIG00000001280	srsf2a	94	64.455	ENSDARG00000057484	srsf2a	100	96.610	Danio_rerio
ENSTNIG00000001280	srsf2a	79	53.073	ENSDNOG00000033905	-	53	62.000	Dasypus_novemcinctus
ENSTNIG00000001280	srsf2a	61	72.464	ENSDORG00000014460	Srsf2	53	88.073	Dipodomys_ordii
ENSTNIG00000001280	srsf2a	52	87.179	ENSFALG00000000869	-	50	90.826	Ficedula_albicollis
ENSTNIG00000001280	srsf2a	51	92.241	ENSGALG00000017357	SRSF2	52	92.241	Gallus_gallus
ENSTNIG00000001280	srsf2a	51	97.368	ENSHBUG00000013254	srsf2a	50	97.368	Haplochromis_burtoni
ENSTNIG00000001280	srsf2a	50	98.214	ENSLBEG00000027265	srsf2a	52	98.214	Labrus_bergylta
ENSTNIG00000001280	srsf2a	51	92.982	ENSLOCG00000011252	srsf2a	53	92.982	Lepisosteus_oculatus
ENSTNIG00000001280	srsf2a	51	97.368	ENSMZEG00005004205	srsf2a	50	97.368	Maylandia_zebra
ENSTNIG00000001280	srsf2a	50	85.714	ENSMZEG00005001748	-	50	85.714	Maylandia_zebra
ENSTNIG00000001280	srsf2a	51	98.246	ENSMMOG00000020751	srsf2a	53	98.246	Mola_mola
ENSTNIG00000001280	srsf2a	51	99.123	ENSMALG00000012956	srsf2a	50	99.123	Monopterus_albus
ENSTNIG00000001280	srsf2a	53	57.143	ENSMLUG00000026613	-	52	58.879	Myotis_lucifugus
ENSTNIG00000001280	srsf2a	66	60.000	ENSNLEG00000031658	-	59	56.250	Nomascus_leucogenys
ENSTNIG00000001280	srsf2a	51	92.105	ENSPKIG00000023128	-	50	92.105	Paramormyrops_kingsleyae
ENSTNIG00000001280	srsf2a	84	67.358	ENSPMGG00000010911	srsf2a	56	91.453	Periophthalmus_magnuspinnatus
ENSTNIG00000001280	srsf2a	51	97.368	ENSPNYG00000001148	srsf2a	50	97.368	Pundamilia_nyererei
ENSTNIG00000001280	srsf2a	50	95.575	ENSSFOG00015003975	-	50	95.575	Scleropages_formosus
ENSTNIG00000001280	srsf2a	50	98.214	ENSSMAG00000005854	srsf2a	53	98.214	Scophthalmus_maximus
ENSTNIG00000001280	srsf2a	55	93.548	ENSSDUG00000013865	srsf2a	50	99.107	Seriola_dumerili
ENSTNIG00000001280	srsf2a	55	93.548	ENSSLDG00000017717	srsf2a	50	99.107	Seriola_lalandi_dorsalis
ENSTNIG00000001280	srsf2a	64	63.194	ENSSSCG00000012212	-	52	73.529	Sus_scrofa
ENSTNIG00000001280	srsf2a	51	91.379	ENSTGUG00000007799	-	52	91.379	Taeniopygia_guttata
ENSTNIG00000001280	srsf2a	54	86.066	ENSTRUG00000024363	srsf2b	50	87.611	Takifugu_rubripes
ENSTNIG00000001280	srsf2a	51	100.000	ENSTRUG00000018104	srsf2a	50	100.000	Takifugu_rubripes
ENSTNIG00000001280	srsf2a	51	92.982	ENSXETG00000025271	srsf2	52	92.982	Xenopus_tropicalis
ENSTNIG00000001280	srsf2a	51	99.123	ENSXCOG00000005917	srsf2a	52	99.123	Xiphophorus_couchianus