EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000001302 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 7318 bases
Position: chrUn_random:37536634-37543951
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000003783	RRM_1	PF00076.22	1.2e-22	1	2
ENSTNIP00000003783	RRM_1	PF00076.22	1.2e-22	2	2
ENSTNIP00000003067	RRM_1	PF00076.22	1.6e-22	1	2
ENSTNIP00000003067	RRM_1	PF00076.22	1.6e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000000533	-	1119	-	ENSTNIP00000003067	373 (aa)	-	H3C498
ENSTNIT00000003300	-	1035	-	ENSTNIP00000003783	345 (aa)	-	H3C6B3

Gene Model

Click here to download ENSTNIG00000001302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000001302's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000001302	-	60	31.765	ENSTNIG00000015047	hnrnpa1b	73	31.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000001302	-	96	39.779	ENSG00000188739	RBM34	83	39.726	Homo_sapiens
ENSTNIG00000001302	-	94	57.647	ENSAPOG00000004027	rbm34	95	51.302	Acanthochromis_polyacanthus
ENSTNIG00000001302	-	95	52.522	ENSACIG00000014842	rbm34	87	47.859	Amphilophus_citrinellus
ENSTNIG00000001302	-	92	54.972	ENSAOCG00000006146	rbm34	94	48.284	Amphiprion_ocellaris
ENSTNIG00000001302	-	92	54.444	ENSAPEG00000022105	rbm34	94	46.953	Amphiprion_percula
ENSTNIG00000001302	-	94	56.334	ENSATEG00000016567	rbm34	93	51.288	Anabas_testudineus
ENSTNIG00000001302	-	56	56.923	ENSAPLG00000004344	RBM34	61	56.923	Anas_platyrhynchos
ENSTNIG00000001302	-	93	38.919	ENSACAG00000001253	RBM34	56	46.988	Anolis_carolinensis
ENSTNIG00000001302	-	94	39.516	ENSANAG00000029971	RBM34	81	39.516	Aotus_nancymaae
ENSTNIG00000001302	-	95	55.764	ENSACLG00000026337	rbm34	94	49.885	Astatotilapia_calliptera
ENSTNIG00000001302	-	95	55.764	ENSACLG00000018471	rbm34	82	49.885	Astatotilapia_calliptera
ENSTNIG00000001302	-	91	46.108	ENSAMXG00000021328	rbm34	76	45.614	Astyanax_mexicanus
ENSTNIG00000001302	-	92	41.040	ENSCJAG00000018125	RBM34	79	41.329	Callithrix_jacchus
ENSTNIG00000001302	-	92	40.580	ENSCAFG00000011507	RBM34	90	38.924	Canis_familiaris
ENSTNIG00000001302	-	91	42.059	ENSTSYG00000009942	RBM34	83	40.833	Carlito_syrichta
ENSTNIG00000001302	-	57	41.117	ENSCAPG00000015346	RBM34	51	41.117	Cavia_aperea
ENSTNIG00000001302	-	94	41.880	ENSCPOG00000015213	RBM34	79	42.075	Cavia_porcellus
ENSTNIG00000001302	-	90	41.108	ENSCCAG00000025584	RBM34	78	40.413	Cebus_capucinus
ENSTNIG00000001302	-	96	40.884	ENSCATG00000031771	RBM34	85	40.323	Cercocebus_atys
ENSTNIG00000001302	-	91	41.896	ENSCLAG00000003464	RBM34	79	41.590	Chinchilla_lanigera
ENSTNIG00000001302	-	96	41.160	ENSCSAG00000010079	RBM34	81	41.525	Chlorocebus_sabaeus
ENSTNIG00000001302	-	95	40.898	ENSCPBG00000005460	RBM34	85	40.898	Chrysemys_picta_bellii
ENSTNIG00000001302	-	92	41.076	ENSCANG00000009561	RBM34	81	40.793	Colobus_angolensis_palliatus
ENSTNIG00000001302	-	92	30.058	ENSCGRG00001018721	Rbm34	89	35.798	Cricetulus_griseus_chok1gshd
ENSTNIG00000001302	-	92	33.429	ENSCGRG00000014051	Rbm34	77	34.593	Cricetulus_griseus_crigri
ENSTNIG00000001302	-	95	52.186	ENSCSEG00000000993	rbm34	82	52.342	Cynoglossus_semilaevis
ENSTNIG00000001302	-	93	53.687	ENSCVAG00000018699	rbm34	92	50.000	Cyprinodon_variegatus
ENSTNIG00000001302	-	95	47.429	ENSDARG00000101877	rbm34	95	46.897	Danio_rerio
ENSTNIG00000001302	-	92	40.462	ENSDNOG00000044740	RBM34	78	41.520	Dasypus_novemcinctus
ENSTNIG00000001302	-	57	55.276	ENSDORG00000006420	Rbm34	63	55.276	Dipodomys_ordii
ENSTNIG00000001302	-	56	53.333	ENSEBUG00000012070	rbm34	62	50.472	Eptatretus_burgeri
ENSTNIG00000001302	-	90	49.102	ENSELUG00000015682	rbm34	77	46.032	Esox_lucius
ENSTNIG00000001302	-	94	39.776	ENSFCAG00000001852	RBM34	80	40.395	Felis_catus
ENSTNIG00000001302	-	53	58.242	ENSFALG00000013552	RBM34	95	58.242	Ficedula_albicollis
ENSTNIG00000001302	-	82	49.667	ENSFHEG00000010140	rbm34	98	49.502	Fundulus_heteroclitus
ENSTNIG00000001302	-	50	57.071	ENSGMOG00000011683	rbm34	70	63.158	Gadus_morhua
ENSTNIG00000001302	-	59	40.611	ENSGALG00000029915	RBM34	77	37.838	Gallus_gallus
ENSTNIG00000001302	-	92	52.486	ENSGAFG00000017798	rbm34	81	51.233	Gambusia_affinis
ENSTNIG00000001302	-	91	53.687	ENSGACG00000001040	-	95	46.948	Gasterosteus_aculeatus
ENSTNIG00000001302	-	95	42.424	ENSGAGG00000020598	RBM34	92	41.772	Gopherus_agassizii
ENSTNIG00000001302	-	96	40.055	ENSGGOG00000007924	RBM34	83	39.726	Gorilla_gorilla
ENSTNIG00000001302	-	95	56.032	ENSHBUG00000015508	rbm34	94	50.577	Haplochromis_burtoni
ENSTNIG00000001302	-	94	40.793	ENSHGLG00000016495	RBM34	81	40.793	Heterocephalus_glaber_female
ENSTNIG00000001302	-	94	40.793	ENSHGLG00100014678	RBM34	81	40.793	Heterocephalus_glaber_male
ENSTNIG00000001302	-	88	49.062	ENSIPUG00000021952	rbm34	50	61.712	Ictalurus_punctatus
ENSTNIG00000001302	-	92	42.045	ENSSTOG00000002792	RBM34	79	41.379	Ictidomys_tridecemlineatus
ENSTNIG00000001302	-	66	50.431	ENSJJAG00000021295	Rbm34	74	50.431	Jaculus_jaculus
ENSTNIG00000001302	-	93	51.724	ENSKMAG00000007790	rbm34	93	47.570	Kryptolebias_marmoratus
ENSTNIG00000001302	-	92	51.977	ENSLBEG00000022530	-	94	49.762	Labrus_bergylta
ENSTNIG00000001302	-	92	48.903	ENSLBEG00000028305	rbm34	93	45.195	Labrus_bergylta
ENSTNIG00000001302	-	94	38.817	ENSLACG00000013628	RBM34	88	37.726	Latimeria_chalumnae
ENSTNIG00000001302	-	93	48.138	ENSLOCG00000015902	rbm34	76	48.138	Lepisosteus_oculatus
ENSTNIG00000001302	-	96	38.211	ENSLAFG00000014289	RBM34	53	48.760	Loxodonta_africana
ENSTNIG00000001302	-	96	40.884	ENSMFAG00000038522	RBM34	85	40.323	Macaca_fascicularis
ENSTNIG00000001302	-	96	40.884	ENSMMUG00000039424	RBM34	89	40.323	Macaca_mulatta
ENSTNIG00000001302	-	96	40.884	ENSMNEG00000040149	RBM34	85	40.323	Macaca_nemestrina
ENSTNIG00000001302	-	93	54.247	ENSMAMG00000018828	rbm34	93	49.409	Mastacembelus_armatus
ENSTNIG00000001302	-	95	56.032	ENSMZEG00005021586	rbm34	94	50.346	Maylandia_zebra
ENSTNIG00000001302	-	61	64.220	ENSMZEG00005010091	-	96	55.755	Maylandia_zebra
ENSTNIG00000001302	-	94	42.487	ENSMGAG00000011921	RBM34	99	41.451	Meleagris_gallopavo
ENSTNIG00000001302	-	91	43.252	ENSMICG00000038704	-	78	43.558	Microcebus_murinus
ENSTNIG00000001302	-	92	40.580	ENSMOCG00000013550	Rbm34	80	40.580	Microtus_ochrogaster
ENSTNIG00000001302	-	92	58.967	ENSMMOG00000018675	rbm34	95	53.904	Mola_mola
ENSTNIG00000001302	-	90	37.069	ENSMODG00000008436	RBM34	59	42.424	Monodelphis_domestica
ENSTNIG00000001302	-	92	55.988	ENSMALG00000007816	rbm34	96	49.105	Monopterus_albus
ENSTNIG00000001302	-	92	40.456	MGP_CAROLIEiJ_G0031732	Rbm34	79	40.741	Mus_caroli
ENSTNIG00000001302	-	92	39.489	ENSMUSG00000033931	Rbm34	78	39.886	Mus_musculus
ENSTNIG00000001302	-	92	40.517	MGP_PahariEiJ_G0023329	Rbm34	79	40.517	Mus_pahari
ENSTNIG00000001302	-	92	39.601	MGP_SPRETEiJ_G0032849	Rbm34	78	40.171	Mus_spretus
ENSTNIG00000001302	-	92	40.227	ENSMPUG00000002849	RBM34	84	38.606	Mustela_putorius_furo
ENSTNIG00000001302	-	92	41.808	ENSMLUG00000016224	RBM34	80	41.243	Myotis_lucifugus
ENSTNIG00000001302	-	92	43.353	ENSNGAG00000010712	Rbm34	80	43.440	Nannospalax_galili
ENSTNIG00000001302	-	95	57.879	ENSNBRG00000010975	rbm34	95	51.508	Neolamprologus_brichardi
ENSTNIG00000001302	-	96	40.055	ENSNLEG00000002610	RBM34	83	39.452	Nomascus_leucogenys
ENSTNIG00000001302	-	71	41.833	ENSMEUG00000005465	-	87	39.858	Notamacropus_eugenii
ENSTNIG00000001302	-	92	40.456	ENSODEG00000006130	RBM34	87	40.688	Octodon_degus
ENSTNIG00000001302	-	95	55.285	ENSONIG00000018121	rbm34	92	50.117	Oreochromis_niloticus
ENSTNIG00000001302	-	92	38.286	ENSOANG00000001206	RBM34	55	48.319	Ornithorhynchus_anatinus
ENSTNIG00000001302	-	91	41.026	ENSOCUG00000009173	RBM34	79	40.922	Oryctolagus_cuniculus
ENSTNIG00000001302	-	95	51.705	ENSORLG00000001221	rbm34	95	45.567	Oryzias_latipes
ENSTNIG00000001302	-	95	51.420	ENSORLG00020016678	rbm34	95	46.059	Oryzias_latipes_hni
ENSTNIG00000001302	-	95	50.289	ENSORLG00015016039	rbm34	95	45.074	Oryzias_latipes_hsok
ENSTNIG00000001302	-	97	49.014	ENSOMEG00000007902	rbm34	95	45.412	Oryzias_melastigma
ENSTNIG00000001302	-	92	39.548	ENSOGAG00000012470	RBM34	79	39.429	Otolemur_garnettii
ENSTNIG00000001302	-	96	38.950	ENSPPAG00000030692	RBM34	83	39.566	Pan_paniscus
ENSTNIG00000001302	-	96	39.335	ENSPPRG00000013597	RBM34	80	40.616	Panthera_pardus
ENSTNIG00000001302	-	96	39.612	ENSPTIG00000011612	RBM34	80	40.896	Panthera_tigris_altaica
ENSTNIG00000001302	-	96	40.055	ENSPTRG00000032432	RBM34	83	39.726	Pan_troglodytes
ENSTNIG00000001302	-	96	40.055	ENSPTRG00000048646	-	83	39.726	Pan_troglodytes
ENSTNIG00000001302	-	96	41.160	ENSPANG00000010411	RBM34	85	40.591	Papio_anubis
ENSTNIG00000001302	-	92	44.745	ENSPKIG00000009284	rbm34	77	45.210	Paramormyrops_kingsleyae
ENSTNIG00000001302	-	96	39.250	ENSPSIG00000011370	RBM34	91	39.750	Pelodiscus_sinensis
ENSTNIG00000001302	-	55	61.257	ENSPMGG00000001183	rbm34	69	51.394	Periophthalmus_magnuspinnatus
ENSTNIG00000001302	-	92	40.058	ENSPEMG00000000265	Rbm34	80	40.173	Peromyscus_maniculatus_bairdii
ENSTNIG00000001302	-	61	54.976	ENSPMAG00000001602	rbm34	55	54.976	Petromyzon_marinus
ENSTNIG00000001302	-	96	36.486	ENSPCIG00000029736	-	54	41.259	Phascolarctos_cinereus
ENSTNIG00000001302	-	96	49.465	ENSPFOG00000009829	-	83	49.337	Poecilia_formosa
ENSTNIG00000001302	-	96	49.465	ENSPLAG00000018385	-	95	46.420	Poecilia_latipinna
ENSTNIG00000001302	-	96	48.368	ENSPMEG00000014440	-	81	48.235	Poecilia_mexicana
ENSTNIG00000001302	-	93	50.546	ENSPREG00000023227	rbm34	95	45.882	Poecilia_reticulata
ENSTNIG00000001302	-	96	40.331	ENSPPYG00000029513	RBM34	83	40.000	Pongo_abelii
ENSTNIG00000001302	-	92	40.116	ENSPCOG00000018448	RBM34	77	40.588	Propithecus_coquereli
ENSTNIG00000001302	-	91	43.228	ENSPVAG00000015158	RBM34	80	42.735	Pteropus_vampyrus
ENSTNIG00000001302	-	95	55.764	ENSPNYG00000004970	rbm34	94	50.346	Pundamilia_nyererei
ENSTNIG00000001302	-	56	67.188	ENSPNAG00000002639	rbm34	62	53.704	Pygocentrus_nattereri
ENSTNIG00000001302	-	92	40.751	ENSRNOG00000020004	Rbm34	79	40.870	Rattus_norvegicus
ENSTNIG00000001302	-	96	41.620	ENSRBIG00000032900	RBM34	80	41.808	Rhinopithecus_bieti
ENSTNIG00000001302	-	96	41.620	ENSRROG00000039131	RBM34	80	41.808	Rhinopithecus_roxellana
ENSTNIG00000001302	-	63	47.032	ENSSHAG00000015812	RBM34	57	43.307	Sarcophilus_harrisii
ENSTNIG00000001302	-	94	45.723	ENSSFOG00015000148	rbm34	79	45.562	Scleropages_formosus
ENSTNIG00000001302	-	92	55.172	ENSSMAG00000020955	rbm34	94	49.883	Scophthalmus_maximus
ENSTNIG00000001302	-	95	53.806	ENSSDUG00000019237	rbm34	95	50.226	Seriola_dumerili
ENSTNIG00000001302	-	95	53.429	ENSSLDG00000000796	rbm34	95	50.125	Seriola_lalandi_dorsalis
ENSTNIG00000001302	-	98	37.864	ENSSPUG00000015430	RBM34	95	38.350	Sphenodon_punctatus
ENSTNIG00000001302	-	94	52.973	ENSSPAG00000010174	rbm34	94	48.260	Stegastes_partitus
ENSTNIG00000001302	-	52	58.011	ENSTGUG00000010234	RBM34	94	58.011	Taeniopygia_guttata
ENSTNIG00000001302	-	98	60.000	ENSTRUG00000011172	rbm34	96	57.421	Takifugu_rubripes
ENSTNIG00000001302	-	96	41.854	ENSXETG00000023721	rbm34	83	41.854	Xenopus_tropicalis
ENSTNIG00000001302	-	96	46.067	ENSXCOG00000011190	RBM34	84	45.882	Xiphophorus_couchianus
ENSTNIG00000001302	-	92	51.657	ENSXMAG00000029852	rbm34	81	50.137	Xiphophorus_maculatus