EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000001303 (Gene tree)
Gene ID: -
Gene Symbol: zgc:123010
Alias: fk11h08|wu:fk11h08
Full Name: zgc:123010
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3046 bases
Position: chr17:5308642-5311687
Accession: ZDB-GENE-051120-15
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000002957	RRM_1	PF00076.22	3.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000004124	-	918	-	ENSTNIP00000001660	306 (aa)	-	H3C094
ENSTNIT00000003670	-	987	-	ENSTNIP00000002957	329 (aa)	-	H3C3Y8

Gene Model

Click here to download ENSTNIG00000001303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000001303's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000001303	zgc:123010	89	36.027	ENSTNIG00000010542	-	88	36.027
ENSTNIG00000001303	zgc:123010	71	36.170	ENSTNIG00000001154	-	95	36.170

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000001303	zgc:123010	100	77.508	ENSAPOG00000019633	zgc:123010	63	77.508	Acanthochromis_polyacanthus
ENSTNIG00000001303	zgc:123010	90	32.479	ENSAPOG00000005058	si:dkey-33c12.4	51	32.479	Acanthochromis_polyacanthus
ENSTNIG00000001303	zgc:123010	83	56.159	ENSAPOG00000001034	-	65	56.159	Acanthochromis_polyacanthus
ENSTNIG00000001303	zgc:123010	100	71.125	ENSACIG00000021684	zgc:123010	81	71.125	Amphilophus_citrinellus
ENSTNIG00000001303	zgc:123010	100	76.900	ENSAOCG00000005910	zgc:123010	63	76.900	Amphiprion_ocellaris
ENSTNIG00000001303	zgc:123010	90	33.048	ENSAOCG00000020066	si:dkey-33c12.4	50	33.048	Amphiprion_ocellaris
ENSTNIG00000001303	zgc:123010	100	77.204	ENSAPEG00000014305	zgc:123010	67	77.204	Amphiprion_percula
ENSTNIG00000001303	zgc:123010	100	73.556	ENSATEG00000001220	zgc:123010	63	73.556	Anabas_testudineus
ENSTNIG00000001303	zgc:123010	99	53.593	ENSATEG00000022160	-	65	53.593	Anabas_testudineus
ENSTNIG00000001303	zgc:123010	90	31.609	ENSATEG00000018885	si:dkey-33c12.4	51	31.594	Anabas_testudineus
ENSTNIG00000001303	zgc:123010	65	39.906	ENSAPLG00000013566	-	100	39.906	Anas_platyrhynchos
ENSTNIG00000001303	zgc:123010	99	53.550	ENSACLG00000012346	-	65	53.550	Astatotilapia_calliptera
ENSTNIG00000001303	zgc:123010	100	73.716	ENSACLG00000010188	zgc:123010	64	73.716	Astatotilapia_calliptera
ENSTNIG00000001303	zgc:123010	91	30.728	ENSACLG00000014192	si:dkey-33c12.4	56	30.400	Astatotilapia_calliptera
ENSTNIG00000001303	zgc:123010	91	35.843	ENSAMXG00000010871	si:dkey-33c12.4	51	35.843	Astyanax_mexicanus
ENSTNIG00000001303	zgc:123010	100	67.781	ENSAMXG00000041967	zgc:123010	61	67.781	Astyanax_mexicanus
ENSTNIG00000001303	zgc:123010	98	32.620	ENSCPBG00000024454	-	53	32.620	Chrysemys_picta_bellii
ENSTNIG00000001303	zgc:123010	90	31.728	ENSCVAG00000006564	-	53	31.728	Cyprinodon_variegatus
ENSTNIG00000001303	zgc:123010	100	72.340	ENSCVAG00000013288	zgc:123010	63	72.340	Cyprinodon_variegatus
ENSTNIG00000001303	zgc:123010	91	34.402	ENSDARG00000057890	si:dkey-33c12.4	52	34.402	Danio_rerio
ENSTNIG00000001303	zgc:123010	100	65.653	ENSDARG00000039082	zgc:123010	67	65.653	Danio_rerio
ENSTNIG00000001303	zgc:123010	91	31.143	ENSELUG00000001633	-	52	31.471	Esox_lucius
ENSTNIG00000001303	zgc:123010	99	56.970	ENSELUG00000021447	-	65	56.970	Esox_lucius
ENSTNIG00000001303	zgc:123010	99	67.278	ENSELUG00000022008	zgc:123010	77	63.914	Esox_lucius
ENSTNIG00000001303	zgc:123010	89	32.653	ENSELUG00000002009	si:dkey-33c12.4	88	33.125	Esox_lucius
ENSTNIG00000001303	zgc:123010	71	36.154	ENSFALG00000008867	-	99	36.154	Ficedula_albicollis
ENSTNIG00000001303	zgc:123010	100	72.036	ENSFHEG00000002306	zgc:123010	63	72.036	Fundulus_heteroclitus
ENSTNIG00000001303	zgc:123010	90	33.803	ENSFHEG00000005521	si:dkey-33c12.4	53	33.803	Fundulus_heteroclitus
ENSTNIG00000001303	zgc:123010	100	67.781	ENSGMOG00000018473	zgc:123010	87	67.781	Gadus_morhua
ENSTNIG00000001303	zgc:123010	81	30.451	ENSGMOG00000001292	-	99	30.451	Gadus_morhua
ENSTNIG00000001303	zgc:123010	73	34.074	ENSGALG00000036747	TTC31	51	34.444	Gallus_gallus
ENSTNIG00000001303	zgc:123010	100	72.948	ENSGAFG00000009373	zgc:123010	63	72.948	Gambusia_affinis
ENSTNIG00000001303	zgc:123010	89	35.714	ENSGACG00000004936	-	87	35.714	Gasterosteus_aculeatus
ENSTNIG00000001303	zgc:123010	100	74.164	ENSGACG00000007620	zgc:123010	87	74.164	Gasterosteus_aculeatus
ENSTNIG00000001303	zgc:123010	91	30.811	ENSHBUG00000010735	si:dkey-33c12.4	54	31.351	Haplochromis_burtoni
ENSTNIG00000001303	zgc:123010	99	53.550	ENSHBUG00000016720	-	65	53.254	Haplochromis_burtoni
ENSTNIG00000001303	zgc:123010	98	34.366	ENSIPUG00000005998	si:dkey-33c12.4	54	34.366	Ictalurus_punctatus
ENSTNIG00000001303	zgc:123010	83	41.912	ENSKMAG00000016610	si:dkey-33c12.4	53	31.429	Kryptolebias_marmoratus
ENSTNIG00000001303	zgc:123010	100	75.076	ENSKMAG00000021350	zgc:123010	63	75.076	Kryptolebias_marmoratus
ENSTNIG00000001303	zgc:123010	90	57.770	ENSLBEG00000013518	-	58	57.770	Labrus_bergylta
ENSTNIG00000001303	zgc:123010	90	30.226	ENSLBEG00000021088	-	54	30.226	Labrus_bergylta
ENSTNIG00000001303	zgc:123010	100	75.380	ENSLBEG00000023984	zgc:123010	63	75.380	Labrus_bergylta
ENSTNIG00000001303	zgc:123010	99	52.744	ENSLACG00000009001	zgc:123010	71	52.744	Latimeria_chalumnae
ENSTNIG00000001303	zgc:123010	90	36.202	ENSLACG00000004602	-	59	36.202	Latimeria_chalumnae
ENSTNIG00000001303	zgc:123010	100	60.831	ENSLOCG00000008967	zgc:123010	65	61.145	Lepisosteus_oculatus
ENSTNIG00000001303	zgc:123010	89	33.628	ENSLOCG00000001861	-	51	33.628	Lepisosteus_oculatus
ENSTNIG00000001303	zgc:123010	99	54.030	ENSMAMG00000003394	-	90	54.030	Mastacembelus_armatus
ENSTNIG00000001303	zgc:123010	100	74.164	ENSMAMG00000001145	zgc:123010	78	74.164	Mastacembelus_armatus
ENSTNIG00000001303	zgc:123010	72	31.922	ENSMAMG00000004311	-	51	31.922	Mastacembelus_armatus
ENSTNIG00000001303	zgc:123010	99	55.963	ENSMAMG00000002377	-	74	55.963	Mastacembelus_armatus
ENSTNIG00000001303	zgc:123010	99	55.657	ENSMAMG00000002460	-	77	55.657	Mastacembelus_armatus
ENSTNIG00000001303	zgc:123010	99	53.529	ENSMAMG00000003439	-	89	53.529	Mastacembelus_armatus
ENSTNIG00000001303	zgc:123010	90	31.534	ENSMAMG00000000111	si:dkey-33c12.4	53	31.092	Mastacembelus_armatus
ENSTNIG00000001303	zgc:123010	100	73.716	ENSMZEG00005027733	zgc:123010	64	73.716	Maylandia_zebra
ENSTNIG00000001303	zgc:123010	99	53.550	ENSMZEG00005014740	-	82	53.550	Maylandia_zebra
ENSTNIG00000001303	zgc:123010	91	30.728	ENSMZEG00005014276	si:dkey-33c12.4	54	30.997	Maylandia_zebra
ENSTNIG00000001303	zgc:123010	100	74.468	ENSMMOG00000010544	zgc:123010	68	74.468	Mola_mola
ENSTNIG00000001303	zgc:123010	86	51.203	ENSMMOG00000017955	-	70	51.203	Mola_mola
ENSTNIG00000001303	zgc:123010	89	31.805	ENSMALG00000002265	si:dkey-33c12.4	54	31.805	Monopterus_albus
ENSTNIG00000001303	zgc:123010	100	76.900	ENSMALG00000017698	zgc:123010	63	76.900	Monopterus_albus
ENSTNIG00000001303	zgc:123010	100	70.213	ENSNBRG00000021157	zgc:123010	73	70.213	Neolamprologus_brichardi
ENSTNIG00000001303	zgc:123010	100	70.695	ENSONIG00000018353	zgc:123010	67	70.695	Oreochromis_niloticus
ENSTNIG00000001303	zgc:123010	90	36.364	ENSONIG00000012263	-	98	34.234	Oreochromis_niloticus
ENSTNIG00000001303	zgc:123010	89	54.153	ENSONIG00000000297	-	99	54.153	Oreochromis_niloticus
ENSTNIG00000001303	zgc:123010	71	38.554	ENSONIG00000007538	-	87	37.826	Oreochromis_niloticus
ENSTNIG00000001303	zgc:123010	90	30.259	ENSORLG00000029651	si:dkey-33c12.4	54	31.412	Oryzias_latipes
ENSTNIG00000001303	zgc:123010	88	67.361	ENSORLG00000007675	zgc:123010	61	67.361	Oryzias_latipes
ENSTNIG00000001303	zgc:123010	90	30.259	ENSORLG00020008750	si:dkey-33c12.4	50	30.259	Oryzias_latipes_hni
ENSTNIG00000001303	zgc:123010	88	67.014	ENSORLG00020003457	zgc:123010	61	67.014	Oryzias_latipes_hni
ENSTNIG00000001303	zgc:123010	100	69.909	ENSORLG00015008373	zgc:123010	64	69.909	Oryzias_latipes_hsok
ENSTNIG00000001303	zgc:123010	100	72.644	ENSOMEG00000003408	zgc:123010	63	72.644	Oryzias_melastigma
ENSTNIG00000001303	zgc:123010	99	57.927	ENSPKIG00000015521	zgc:123010	71	57.927	Paramormyrops_kingsleyae
ENSTNIG00000001303	zgc:123010	100	62.121	ENSPMGG00000020251	zgc:123010	71	62.121	Periophthalmus_magnuspinnatus
ENSTNIG00000001303	zgc:123010	76	40.157	ENSPMAG00000009352	-	94	38.214	Petromyzon_marinus
ENSTNIG00000001303	zgc:123010	88	43.299	ENSPMAG00000004544	zgc:123010	100	43.299	Petromyzon_marinus
ENSTNIG00000001303	zgc:123010	71	33.217	ENSPFOG00000017092	-	62	30.464	Poecilia_formosa
ENSTNIG00000001303	zgc:123010	100	73.252	ENSPFOG00000001073	zgc:123010	63	73.252	Poecilia_formosa
ENSTNIG00000001303	zgc:123010	100	73.252	ENSPLAG00000007711	zgc:123010	63	73.252	Poecilia_latipinna
ENSTNIG00000001303	zgc:123010	100	73.252	ENSPMEG00000005092	zgc:123010	63	73.252	Poecilia_mexicana
ENSTNIG00000001303	zgc:123010	100	63.830	ENSPREG00000019587	zgc:123010	72	63.830	Poecilia_reticulata
ENSTNIG00000001303	zgc:123010	100	73.939	ENSPNYG00000007893	zgc:123010	64	73.939	Pundamilia_nyererei
ENSTNIG00000001303	zgc:123010	91	30.728	ENSPNYG00000018262	si:dkey-33c12.4	54	30.997	Pundamilia_nyererei
ENSTNIG00000001303	zgc:123010	99	50.578	ENSPNYG00000023304	-	79	50.578	Pundamilia_nyererei
ENSTNIG00000001303	zgc:123010	91	34.795	ENSPNAG00000018386	si:dkey-33c12.4	52	34.795	Pygocentrus_nattereri
ENSTNIG00000001303	zgc:123010	100	68.788	ENSPNAG00000007579	zgc:123010	63	68.788	Pygocentrus_nattereri
ENSTNIG00000001303	zgc:123010	89	33.125	ENSSFOG00015005186	-	52	33.750	Scleropages_formosus
ENSTNIG00000001303	zgc:123010	87	32.335	ENSSFOG00015009199	-	52	32.335	Scleropages_formosus
ENSTNIG00000001303	zgc:123010	99	60.241	ENSSFOG00015021394	zgc:123010	68	60.241	Scleropages_formosus
ENSTNIG00000001303	zgc:123010	100	75.684	ENSSMAG00000002904	zgc:123010	62	79.530	Scophthalmus_maximus
ENSTNIG00000001303	zgc:123010	91	55.184	ENSSMAG00000021096	-	58	55.369	Scophthalmus_maximus
ENSTNIG00000001303	zgc:123010	100	77.812	ENSSDUG00000008651	zgc:123010	63	77.812	Seriola_dumerili
ENSTNIG00000001303	zgc:123010	99	56.973	ENSSDUG00000014026	-	64	56.973	Seriola_dumerili
ENSTNIG00000001303	zgc:123010	91	32.295	ENSSDUG00000003213	si:dkey-33c12.4	56	32.295	Seriola_dumerili
ENSTNIG00000001303	zgc:123010	90	32.386	ENSSLDG00000009448	si:dkey-33c12.4	52	32.386	Seriola_lalandi_dorsalis
ENSTNIG00000001303	zgc:123010	100	77.812	ENSSLDG00000019386	zgc:123010	65	77.812	Seriola_lalandi_dorsalis
ENSTNIG00000001303	zgc:123010	100	77.204	ENSSPAG00000013621	zgc:123010	63	77.204	Stegastes_partitus
ENSTNIG00000001303	zgc:123010	90	31.461	ENSSPAG00000022577	-	51	31.461	Stegastes_partitus
ENSTNIG00000001303	zgc:123010	100	78.723	ENSTRUG00000024824	zgc:123010	64	78.723	Takifugu_rubripes
ENSTNIG00000001303	zgc:123010	81	35.540	ENSTRUG00000000057	-	53	35.540	Takifugu_rubripes
ENSTNIG00000001303	zgc:123010	91	49.667	ENSXETG00000033896	-	99	49.667	Xenopus_tropicalis
ENSTNIG00000001303	zgc:123010	100	68.235	ENSXCOG00000012281	zgc:123010	77	68.235	Xiphophorus_couchianus
ENSTNIG00000001303	zgc:123010	100	73.860	ENSXMAG00000002598	zgc:123010	63	73.860	Xiphophorus_maculatus