EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000001334 (Gene tree)
Gene ID: -
Gene Symbol: rpp38
Alias: fc10d08|wu:fc10d08|zgc:92924
Full Name: ribonuclease P/MRP 38 subunit
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 789 bases
Position: chr8:7698737-7699525
Accession: ZDB-GENE-040718-258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000001928	Ribosomal_L7Ae	PF01248.26	4.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000002229	-	789	-	ENSTNIP00000001928	262 (aa)	-	H3C112

Gene Model

Click here to download ENSTNIG00000001334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000001334's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000001334	rpp38	96	42.705	ENSG00000152464	RPP38	100	46.471	Homo_sapiens
ENSTNIG00000001334	rpp38	97	62.774	ENSAPOG00000001240	rpp38	98	62.057	Acanthochromis_polyacanthus
ENSTNIG00000001334	rpp38	96	43.956	ENSAMEG00000018832	RPP38	94	43.956	Ailuropoda_melanoleuca
ENSTNIG00000001334	rpp38	97	65.918	ENSACIG00000011592	rpp38	99	65.455	Amphilophus_citrinellus
ENSTNIG00000001334	rpp38	97	59.930	ENSAOCG00000017293	rpp38	98	59.322	Amphiprion_ocellaris
ENSTNIG00000001334	rpp38	97	62.963	ENSAPEG00000002315	rpp38	98	62.230	Amphiprion_percula
ENSTNIG00000001334	rpp38	98	66.176	ENSATEG00000000731	rpp38	99	66.176	Anabas_testudineus
ENSTNIG00000001334	rpp38	89	43.478	ENSAPLG00000002054	RPP38	88	43.478	Anas_platyrhynchos
ENSTNIG00000001334	rpp38	97	66.923	ENSACLG00000016962	rpp38	99	66.418	Astatotilapia_calliptera
ENSTNIG00000001334	rpp38	97	66.538	ENSACLG00000016958	rpp38	99	66.418	Astatotilapia_calliptera
ENSTNIG00000001334	rpp38	96	46.215	ENSAMXG00000025023	rpp38	96	45.594	Astyanax_mexicanus
ENSTNIG00000001334	rpp38	96	43.431	ENSBTAG00000007702	RPP38	94	43.431	Bos_taurus
ENSTNIG00000001334	rpp38	97	44.043	ENSCAFG00000024373	RPP38	95	44.043	Canis_familiaris
ENSTNIG00000001334	rpp38	97	44.043	ENSCAFG00020008008	RPP38	95	44.043	Canis_lupus_dingo
ENSTNIG00000001334	rpp38	96	43.223	ENSCHIG00000012484	RPP38	94	43.223	Capra_hircus
ENSTNIG00000001334	rpp38	96	44.981	ENSCPOG00000003981	RPP38	93	44.981	Cavia_porcellus
ENSTNIG00000001334	rpp38	96	44.765	ENSCLAG00000010194	RPP38	94	44.765	Chinchilla_lanigera
ENSTNIG00000001334	rpp38	95	43.463	ENSCSAG00000019055	RPP38	96	42.907	Chlorocebus_sabaeus
ENSTNIG00000001334	rpp38	96	43.590	ENSCHOG00000004335	RPP38	94	43.841	Choloepus_hoffmanni
ENSTNIG00000001334	rpp38	96	43.223	ENSCGRG00001001395	Rpp38	94	43.223	Cricetulus_griseus_chok1gshd
ENSTNIG00000001334	rpp38	96	43.223	ENSCGRG00000017441	Rpp38	94	43.223	Cricetulus_griseus_crigri
ENSTNIG00000001334	rpp38	97	60.837	ENSCSEG00000001721	rpp38	99	60.148	Cynoglossus_semilaevis
ENSTNIG00000001334	rpp38	97	56.159	ENSCVAG00000001676	rpp38	96	56.475	Cyprinodon_variegatus
ENSTNIG00000001334	rpp38	90	50.826	ENSDARG00000040350	rpp38	94	50.388	Danio_rerio
ENSTNIG00000001334	rpp38	96	42.435	ENSDNOG00000040314	RPP38	94	43.478	Dasypus_novemcinctus
ENSTNIG00000001334	rpp38	91	44.706	ENSDORG00000009783	Rpp38	88	44.706	Dipodomys_ordii
ENSTNIG00000001334	rpp38	96	42.279	ENSETEG00000002839	RPP38	94	42.279	Echinops_telfairi
ENSTNIG00000001334	rpp38	96	45.091	ENSEASG00005019783	RPP38	93	46.014	Equus_asinus_asinus
ENSTNIG00000001334	rpp38	91	42.023	ENSEEUG00000014677	RPP38	89	43.511	Erinaceus_europaeus
ENSTNIG00000001334	rpp38	96	50.173	ENSELUG00000010160	rpp38	99	49.498	Esox_lucius
ENSTNIG00000001334	rpp38	96	42.804	ENSFCAG00000022449	RPP38	94	43.116	Felis_catus
ENSTNIG00000001334	rpp38	89	43.137	ENSFALG00000014804	RPP38	85	43.137	Ficedula_albicollis
ENSTNIG00000001334	rpp38	96	42.960	ENSFDAG00000018669	RPP38	94	42.960	Fukomys_damarensis
ENSTNIG00000001334	rpp38	97	57.401	ENSFHEG00000013741	rpp38	98	57.193	Fundulus_heteroclitus
ENSTNIG00000001334	rpp38	89	43.651	ENSGALG00000008794	RPP38	84	43.651	Gallus_gallus
ENSTNIG00000001334	rpp38	62	74.691	ENSGACG00000009258	rpp38	99	74.691	Gasterosteus_aculeatus
ENSTNIG00000001334	rpp38	97	66.538	ENSHBUG00000010937	rpp38	100	66.052	Haplochromis_burtoni
ENSTNIG00000001334	rpp38	96	44.404	ENSHGLG00000012144	RPP38	94	44.404	Heterocephalus_glaber_female
ENSTNIG00000001334	rpp38	96	47.012	ENSIPUG00000022879	rpp38	95	46.457	Ictalurus_punctatus
ENSTNIG00000001334	rpp38	91	45.276	ENSSTOG00000025699	RPP38	87	45.276	Ictidomys_tridecemlineatus
ENSTNIG00000001334	rpp38	97	43.369	ENSJJAG00000007523	Rpp38	95	43.369	Jaculus_jaculus
ENSTNIG00000001334	rpp38	92	58.779	ENSKMAG00000003986	rpp38	93	58.519	Kryptolebias_marmoratus
ENSTNIG00000001334	rpp38	99	63.636	ENSLBEG00000006853	rpp38	99	64.000	Labrus_bergylta
ENSTNIG00000001334	rpp38	96	44.014	ENSLACG00000006502	RPP38	95	44.014	Latimeria_chalumnae
ENSTNIG00000001334	rpp38	100	42.857	ENSLOCG00000018347	rpp38	97	44.876	Lepisosteus_oculatus
ENSTNIG00000001334	rpp38	96	42.857	ENSLAFG00000000509	RPP38	94	42.857	Loxodonta_africana
ENSTNIG00000001334	rpp38	95	43.110	ENSMMUG00000007679	RPP38	96	42.561	Macaca_mulatta
ENSTNIG00000001334	rpp38	97	65.909	ENSMAMG00000012774	rpp38	96	65.909	Mastacembelus_armatus
ENSTNIG00000001334	rpp38	97	67.308	ENSMZEG00005003189	rpp38	100	66.790	Maylandia_zebra
ENSTNIG00000001334	rpp38	97	66.538	ENSMZEG00005003200	rpp38	99	66.418	Maylandia_zebra
ENSTNIG00000001334	rpp38	89	44.000	ENSMGAG00000008217	RPP38	84	43.825	Meleagris_gallopavo
ENSTNIG00000001334	rpp38	96	44.043	ENSMAUG00000003644	Rpp38	94	43.214	Mesocricetus_auratus
ENSTNIG00000001334	rpp38	96	42.545	ENSMOCG00000007020	Rpp38	94	42.545	Microtus_ochrogaster
ENSTNIG00000001334	rpp38	99	63.004	ENSMMOG00000003446	rpp38	99	63.004	Mola_mola
ENSTNIG00000001334	rpp38	95	42.697	ENSMODG00000024091	RPP38	94	42.697	Monodelphis_domestica
ENSTNIG00000001334	rpp38	98	62.082	ENSMALG00000002356	rpp38	98	62.082	Monopterus_albus
ENSTNIG00000001334	rpp38	97	42.199	MGP_CAROLIEiJ_G0023133	Rpp38	95	42.105	Mus_caroli
ENSTNIG00000001334	rpp38	97	41.489	ENSMUSG00000049950	Rpp38	95	41.844	Mus_musculus
ENSTNIG00000001334	rpp38	97	42.908	MGP_PahariEiJ_G0019193	Rpp38	95	43.262	Mus_pahari
ENSTNIG00000001334	rpp38	97	41.135	MGP_SPRETEiJ_G0024051	Rpp38	95	41.489	Mus_spretus
ENSTNIG00000001334	rpp38	96	43.321	ENSMPUG00000018523	RPP38	95	44.128	Mustela_putorius_furo
ENSTNIG00000001334	rpp38	95	41.877	ENSMLUG00000002153	RPP38	96	41.696	Myotis_lucifugus
ENSTNIG00000001334	rpp38	96	43.956	ENSNGAG00000011066	Rpp38	94	43.956	Nannospalax_galili
ENSTNIG00000001334	rpp38	97	67.692	ENSNBRG00000006994	rpp38	99	66.791	Neolamprologus_brichardi
ENSTNIG00000001334	rpp38	97	67.692	ENSONIG00000020467	rpp38	98	66.791	Oreochromis_niloticus
ENSTNIG00000001334	rpp38	95	44.569	ENSOCUG00000024367	-	90	45.385	Oryctolagus_cuniculus
ENSTNIG00000001334	rpp38	95	44.569	ENSOCUG00000022768	-	90	45.385	Oryctolagus_cuniculus
ENSTNIG00000001334	rpp38	96	61.423	ENSORLG00000009219	rpp38	97	60.364	Oryzias_latipes
ENSTNIG00000001334	rpp38	96	61.194	ENSORLG00020011503	rpp38	94	60.145	Oryzias_latipes_hni
ENSTNIG00000001334	rpp38	96	61.194	ENSORLG00015017702	rpp38	94	60.145	Oryzias_latipes_hsok
ENSTNIG00000001334	rpp38	90	62.992	ENSOMEG00000005414	rpp38	98	60.791	Oryzias_melastigma
ENSTNIG00000001334	rpp38	92	43.969	ENSOGAG00000008059	RPP38	90	44.697	Otolemur_garnettii
ENSTNIG00000001334	rpp38	96	43.590	ENSOARG00000004534	RPP38	94	43.590	Ovis_aries
ENSTNIG00000001334	rpp38	96	43.772	ENSPPAG00000041577	RPP38	86	43.772	Pan_paniscus
ENSTNIG00000001334	rpp38	96	41.818	ENSPPRG00000015329	RPP38	94	42.391	Panthera_pardus
ENSTNIG00000001334	rpp38	96	42.222	ENSPTIG00000007188	RPP38	94	42.391	Panthera_tigris_altaica
ENSTNIG00000001334	rpp38	96	43.772	ENSPTRG00000002318	RPP38	86	43.772	Pan_troglodytes
ENSTNIG00000001334	rpp38	94	47.490	ENSPKIG00000025652	rpp38	95	47.253	Paramormyrops_kingsleyae
ENSTNIG00000001334	rpp38	95	40.449	ENSPSIG00000001527	RPP38	92	40.449	Pelodiscus_sinensis
ENSTNIG00000001334	rpp38	96	42.435	ENSPEMG00000008375	Rpp38	94	42.435	Peromyscus_maniculatus_bairdii
ENSTNIG00000001334	rpp38	97	45.018	ENSPCIG00000009096	RPP38	89	45.018	Phascolarctos_cinereus
ENSTNIG00000001334	rpp38	74	58.706	ENSPFOG00000016823	rpp38	99	58.706	Poecilia_formosa
ENSTNIG00000001334	rpp38	99	54.093	ENSPLAG00000007626	rpp38	99	54.093	Poecilia_latipinna
ENSTNIG00000001334	rpp38	97	49.451	ENSPMEG00000020392	rpp38	99	49.110	Poecilia_mexicana
ENSTNIG00000001334	rpp38	97	53.818	ENSPREG00000017744	rpp38	99	53.818	Poecilia_reticulata
ENSTNIG00000001334	rpp38	97	42.606	ENSPPYG00000002113	RPP38	95	42.958	Pongo_abelii
ENSTNIG00000001334	rpp38	95	45.126	ENSPVAG00000007155	RPP38	96	44.876	Pteropus_vampyrus
ENSTNIG00000001334	rpp38	97	66.923	ENSPNYG00000004293	rpp38	100	66.421	Pundamilia_nyererei
ENSTNIG00000001334	rpp38	90	48.954	ENSPNAG00000010633	rpp38	96	48.649	Pygocentrus_nattereri
ENSTNIG00000001334	rpp38	97	44.485	ENSRNOG00000038025	Rpp38	96	44.485	Rattus_norvegicus
ENSTNIG00000001334	rpp38	95	43.820	ENSSHAG00000015529	RPP38	94	43.820	Sarcophilus_harrisii
ENSTNIG00000001334	rpp38	96	63.258	ENSSMAG00000018276	rpp38	94	63.258	Scophthalmus_maximus
ENSTNIG00000001334	rpp38	96	66.412	ENSSDUG00000001651	rpp38	99	65.441	Seriola_dumerili
ENSTNIG00000001334	rpp38	96	64.015	ENSSLDG00000014355	rpp38	99	63.139	Seriola_lalandi_dorsalis
ENSTNIG00000001334	rpp38	96	36.264	ENSSARG00000012099	RPP38	93	36.264	Sorex_araneus
ENSTNIG00000001334	rpp38	95	44.195	ENSSPUG00000005237	-	92	44.195	Sphenodon_punctatus
ENSTNIG00000001334	rpp38	91	42.023	ENSSPUG00000008560	-	90	42.023	Sphenodon_punctatus
ENSTNIG00000001334	rpp38	95	43.820	ENSSPUG00000018363	-	92	43.820	Sphenodon_punctatus
ENSTNIG00000001334	rpp38	97	62.162	ENSSPAG00000020387	rpp38	98	61.423	Stegastes_partitus
ENSTNIG00000001334	rpp38	96	41.993	ENSSSCG00000027110	RPP38	94	41.993	Sus_scrofa
ENSTNIG00000001334	rpp38	89	42.353	ENSTGUG00000001366	RPP38	88	42.353	Taeniopygia_guttata
ENSTNIG00000001334	rpp38	91	44.275	ENSTTRG00000004420	RPP38	89	44.275	Tursiops_truncatus
ENSTNIG00000001334	rpp38	96	44.689	ENSUAMG00000002618	RPP38	94	44.689	Ursus_americanus
ENSTNIG00000001334	rpp38	96	43.636	ENSUMAG00000012382	RPP38	94	44.727	Ursus_maritimus
ENSTNIG00000001334	rpp38	96	43.431	ENSVVUG00000005272	RPP38	94	43.369	Vulpes_vulpes
ENSTNIG00000001334	rpp38	95	39.405	ENSXETG00000003419	rpp38	98	39.068	Xenopus_tropicalis