EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000001448 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1628 bases
Position: chr19:2762435-2764062
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000002027	GTP_EFTU	PF00009.27	5.8e-07	1	1
ENSTNIP00000002027	MMR_HSR1	PF01926.23	4.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000003074	-	504	-	ENSTNIP00000002027	168 (aa)	-	H3C1B1

Gene Model

Click here to download ENSTNIG00000001448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000001448's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000001448	-	90	31.579	ENSTNIG00000014591	rheb	82	31.579
ENSTNIG00000001448	-	98	46.988	ENSTNIG00000001043	si:ch211-247i17.1	82	46.988
ENSTNIG00000001448	-	93	33.544	ENSTNIG00000017844	-	84	33.544
ENSTNIG00000001448	-	96	30.994	ENSTNIG00000003649	rasl11a	73	30.994
ENSTNIG00000001448	-	86	38.776	ENSTNIG00000015000	zgc:101559	62	38.776
ENSTNIG00000001448	-	89	33.333	ENSTNIG00000016575	rab23	69	35.802
ENSTNIG00000001448	-	91	42.484	ENSTNIG00000004511	-	95	42.484
ENSTNIG00000001448	-	95	35.849	ENSTNIG00000002003	-	78	35.849
ENSTNIG00000001448	-	98	42.169	ENSTNIG00000001260	RAB15	78	42.169
ENSTNIG00000001448	-	95	36.585	ENSTNIG00000011114	-	79	36.585
ENSTNIG00000001448	-	96	33.939	ENSTNIG00000016231	rab34a	64	33.939
ENSTNIG00000001448	-	96	65.839	ENSTNIG00000008784	-	99	65.839
ENSTNIG00000001448	-	87	34.014	ENSTNIG00000010122	rab33a	63	34.014
ENSTNIG00000001448	-	89	39.735	ENSTNIG00000010125	rab33ba	63	39.735
ENSTNIG00000001448	-	94	43.038	ENSTNIG00000009196	rab5aa	73	43.038
ENSTNIG00000001448	-	95	36.585	ENSTNIG00000014604	RAB7A	79	36.585
ENSTNIG00000001448	-	98	35.758	ENSTNIG00000011300	si:dkey-16l2.16	78	36.196
ENSTNIG00000001448	-	99	33.533	ENSTNIG00000018267	rab22a	86	33.533
ENSTNIG00000001448	-	98	37.805	ENSTNIG00000013184	-	75	37.805
ENSTNIG00000001448	-	98	37.805	ENSTNIG00000013182	-	76	37.805
ENSTNIG00000001448	-	79	31.818	ENSTNIG00000013920	rab20	54	31.818
ENSTNIG00000001448	-	87	37.500	ENSTNIG00000012343	-	64	37.500
ENSTNIG00000001448	-	96	32.716	ENSTNIG00000009039	rab14	74	32.716
ENSTNIG00000001448	-	94	40.506	ENSTNIG00000011711	rab5c	71	40.506
ENSTNIG00000001448	-	99	30.539	ENSTNIG00000013137	ran	76	30.539
ENSTNIG00000001448	-	95	31.481	ENSTNIG00000016158	rab34b	63	31.481
ENSTNIG00000001448	-	100	40.828	ENSTNIG00000006650	RAB19	78	40.828
ENSTNIG00000001448	-	98	37.805	ENSTNIG00000011081	rab11bb	75	37.805
ENSTNIG00000001448	-	100	40.000	ENSTNIG00000018498	-	75	40.000
ENSTNIG00000001448	-	90	39.735	ENSTNIG00000004004	-	82	39.735
ENSTNIG00000001448	-	96	38.037	ENSTNIG00000008717	rab18a	79	38.037
ENSTNIG00000001448	-	95	30.303	ENSTNIG00000006596	dnajc27	60	30.303
ENSTNIG00000001448	-	92	37.662	ENSTNIG00000003472	rab2a	72	37.662
ENSTNIG00000001448	-	98	33.333	ENSTNIG00000001956	RAB9A	80	33.333
ENSTNIG00000001448	-	73	32.258	ENSTNIG00000006917	si:cabz01085950.1	94	32.258
ENSTNIG00000001448	-	97	41.718	ENSTNIG00000015257	rab6bb	78	41.718
ENSTNIG00000001448	-	97	35.928	ENSTNIG00000003679	-	78	35.928
ENSTNIG00000001448	-	96	37.423	ENSTNIG00000007882	rab18b	79	37.423
ENSTNIG00000001448	-	98	31.138	ENSTNIG00000009798	nkiras1	87	31.138
ENSTNIG00000001448	-	100	45.238	ENSTNIG00000016414	rab15	79	45.238
ENSTNIG00000001448	-	99	35.838	ENSTNIG00000001195	rab9a	84	35.838
ENSTNIG00000001448	-	69	31.034	ENSTNIG00000017951	rabl2	52	31.034
ENSTNIG00000001448	-	98	35.882	ENSTNIG00000005090	rab25a	78	35.882
ENSTNIG00000001448	-	97	35.583	ENSTNIG00000014859	rab12	68	35.583
ENSTNIG00000001448	-	98	44.242	ENSTNIG00000018319	-	83	44.242
ENSTNIG00000001448	-	97	40.361	ENSTNIG00000016831	RAB41	78	40.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000001448	-	92	52.258	ENSACAG00000016658	-	82	52.258	Anolis_carolinensis
ENSTNIG00000001448	-	81	46.897	ENSETEG00000008991	-	94	46.897	Echinops_telfairi
ENSTNIG00000001448	-	98	51.829	ENSFALG00000003276	-	78	51.829	Ficedula_albicollis
ENSTNIG00000001448	-	98	81.098	ENSGMOG00000018741	-	77	81.098	Gadus_morhua
ENSTNIG00000001448	-	98	87.879	ENSGACG00000019767	-	83	87.879	Gasterosteus_aculeatus
ENSTNIG00000001448	-	91	50.327	ENSLAFG00000000202	-	87	50.327	Loxodonta_africana
ENSTNIG00000001448	-	97	52.761	ENSMGAG00000002516	-	72	52.761	Meleagris_gallopavo
ENSTNIG00000001448	-	96	50.311	ENSMUSG00000064147	Rab44	61	50.311	Mus_musculus
ENSTNIG00000001448	-	96	49.068	ENSMPUG00000014188	-	66	49.068	Mustela_putorius_furo
ENSTNIG00000001448	-	81	51.471	ENSMLUG00000010706	-	75	51.471	Myotis_lucifugus
ENSTNIG00000001448	-	81	51.389	ENSMEUG00000004712	-	96	51.389	Notamacropus_eugenii
ENSTNIG00000001448	-	61	46.364	ENSOPRG00000006034	-	92	46.364	Ochotona_princeps
ENSTNIG00000001448	-	96	92.547	ENSONIG00000011542	-	99	92.547	Oreochromis_niloticus
ENSTNIG00000001448	-	92	56.129	ENSPSIG00000002522	-	100	56.129	Pelodiscus_sinensis
ENSTNIG00000001448	-	81	49.306	ENSPVAG00000014624	-	94	49.306	Pteropus_vampyrus
ENSTNIG00000001448	-	98	52.439	ENSTGUG00000017468	-	78	52.439	Taeniopygia_guttata